RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 P0C880 135 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 ANAPC11Q9NYG5 84 aa4.41□□□□□ -1.7
ZIM3-201ENST00000269834 SPINK6Q6UWN8 80 aa4.4□□□□□ -1.71
ZIM3-201ENST00000269834 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
ZIM3-201ENST00000269834 A0A1B0GU33 70 aa4.37□□□□□ -1.71
ZIM3-201ENST00000269834 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
ZIM3-201ENST00000269834 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
ZIM3-201ENST00000269834 DNAH2Q9P225 4427 aa4.34□□□□□ -1.72
ZIM3-201ENST00000269834 A0A1B0GU69 56 aa4.33□□□□□ -1.72
ZIM3-201ENST00000269834 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
ZIM3-201ENST00000269834 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
ZIM3-201ENST00000269834 R4GN34 69 aa4.33□□□□□ -1.72
ZIM3-201ENST00000269834 SPATA8Q6RVD6 105 aa4.33□□□□□ -1.72
ZIM3-201ENST00000269834 SACSQ9NZJ4 4579 aa4.32□□□□□ -1.72
ZIM3-201ENST00000269834 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
ZIM3-201ENST00000269834 KRTAP13-2Q52LG2 175 aa4.31□□□□□ -1.72
ZIM3-201ENST00000269834 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
ZIM3-201ENST00000269834 UQCR11O14957 56 aa4.28□□□□□ -1.72
ZIM3-201ENST00000269834 Q6ZSA8 131 aa4.28□□□□□ -1.72
ZIM3-201ENST00000269834 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
ZIM3-201ENST00000269834 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
ZIM3-201ENST00000269834 DNAH5Q8TE73 4624 aa4.25□□□□□ -1.73
ZIM3-201ENST00000269834 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
ZIM3-201ENST00000269834 LY6G6CO95867 125 aa4.25□□□□□ -1.73
ZIM3-201ENST00000269834 KMT2AQ03164 3969 aa4.23□□□□□ -1.73
ZIM3-201ENST00000269834 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
ZIM3-201ENST00000269834 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
ZIM3-201ENST00000269834 SPINK1P00995 79 aa4.23□□□□□ -1.73
ZIM3-201ENST00000269834 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
ZIM3-201ENST00000269834 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
ZIM3-201ENST00000269834 PKD1P98161 4303 aa4.18□□□□□ -1.74
ZIM3-201ENST00000269834 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
ZIM3-201ENST00000269834 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
ZIM3-201ENST00000269834 LINC00304Q8N9R0 145 aa4.14□□□□□ -1.75
ZIM3-201ENST00000269834 HERC1Q15751 4861 aa4.13□□□□□ -1.75
ZIM3-201ENST00000269834 FAT2Q9NYQ8 4349 aa4.13□□□□□ -1.75
ZIM3-201ENST00000269834 H0YAA0 97 aa4.1□□□□□ -1.75
ZIM3-201ENST00000269834 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
ZIM3-201ENST00000269834 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
ZIM3-201ENST00000269834 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
ZIM3-201ENST00000269834 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
ZIM3-201ENST00000269834 MUC2Q02817 5179 aa4.06□□□□□ -1.76
ZIM3-201ENST00000269834 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
ZIM3-201ENST00000269834 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
ZIM3-201ENST00000269834 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
ZIM3-201ENST00000269834 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
ZIM3-201ENST00000269834 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
ZIM3-201ENST00000269834 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
ZIM3-201ENST00000269834 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
ZIM3-201ENST00000269834 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
ZIM3-201ENST00000269834 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
ZIM3-201ENST00000269834 CRIPTQ9P021 101 aa3.96□□□□□ -1.77
ZIM3-201ENST00000269834 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
ZIM3-201ENST00000269834 DYNC1H1Q14204 4646 aaKnown RBP3.95□□□□□ -1.78
ZIM3-201ENST00000269834 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
ZIM3-201ENST00000269834 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
ZIM3-201ENST00000269834 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
ZIM3-201ENST00000269834 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
ZIM3-201ENST00000269834 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
ZIM3-201ENST00000269834 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.79
ZIM3-201ENST00000269834 S4R3F8 94 aa3.87□□□□□ -1.79
ZIM3-201ENST00000269834 TNXBP22105 4242 aa3.86□□□□□ -1.79
ZIM3-201ENST00000269834 FAT1Q14517 4588 aa3.85□□□□□ -1.79
ZIM3-201ENST00000269834 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
ZIM3-201ENST00000269834 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
ZIM3-201ENST00000269834 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
ZIM3-201ENST00000269834 HSPG2P98160 4391 aa3.83□□□□□ -1.8
ZIM3-201ENST00000269834 Q5VSD8 79 aa3.83□□□□□ -1.8
ZIM3-201ENST00000269834 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
ZIM3-201ENST00000269834 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
ZIM3-201ENST00000269834 SSPOA2VEC9 5147 aa3.79□□□□□ -1.8
ZIM3-201ENST00000269834 A0A0D9SG42 100 aa3.78□□□□□ -1.8
ZIM3-201ENST00000269834 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
ZIM3-201ENST00000269834 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
ZIM3-201ENST00000269834 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
ZIM3-201ENST00000269834 M0QZ58 72 aa3.74□□□□□ -1.81
ZIM3-201ENST00000269834 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
ZIM3-201ENST00000269834 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
ZIM3-201ENST00000269834 MT1HL1P0DM35 61 aa3.7□□□□□ -1.82
ZIM3-201ENST00000269834 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
ZIM3-201ENST00000269834 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
ZIM3-201ENST00000269834 MT3P25713 68 aa3.64□□□□□ -1.83
ZIM3-201ENST00000269834 LPAP08519 4548 aa3.54□□□□□ -1.84
ZIM3-201ENST00000269834 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
ZIM3-201ENST00000269834 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
ZIM3-201ENST00000269834 LRP2P98164 4655 aa3.53□□□□□ -1.84
ZIM3-201ENST00000269834 INE1O15225 51 aa3.53□□□□□ -1.84
ZIM3-201ENST00000269834 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
ZIM3-201ENST00000269834 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
ZIM3-201ENST00000269834 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
ZIM3-201ENST00000269834 NEBP20929 6669 aa3.46□□□□□ -1.86
ZIM3-201ENST00000269834 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
ZIM3-201ENST00000269834 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
ZIM3-201ENST00000269834 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
ZIM3-201ENST00000269834 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
ZIM3-201ENST00000269834 KRTAP2-3P0C7H8 128 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms