RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 DNAH3Q8TD57 4116 aa2.76□□□□□ -1.97
SSH2-201ENST00000269033 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
SSH2-201ENST00000269033 MT3P25713 68 aa2.66□□□□□ -1.98
SSH2-201ENST00000269033 KRTAP10-6P60371 365 aaPredicted RBP2.65□□□□□ -1.99
SSH2-201ENST00000269033 KRTAP3-1Q9BYR8 98 aa2.65□□□□□ -1.99
SSH2-201ENST00000269033 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
SSH2-201ENST00000269033 KRTAP8-1Q8IUC2 63 aa2.63□□□□□ -1.99
SSH2-201ENST00000269033 MT1HL1P0DM35 61 aa2.61□□□□□ -1.99
SSH2-201ENST00000269033 HUWE1Q7Z6Z7 4374 aaKnown RBP2.61□□□□□ -1.99
SSH2-201ENST00000269033 KMT2AQ03164 3969 aa2.57□□□□□ -2
SSH2-201ENST00000269033 KRTAP10-5P60370 271 aa2.52□□□□□ -2.01
SSH2-201ENST00000269033 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
SSH2-201ENST00000269033 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
SSH2-201ENST00000269033 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
SSH2-201ENST00000269033 KRTAP4-5Q9BYR2 181 aa2.47□□□□□ -2.01
SSH2-201ENST00000269033 DNAH6Q9C0G6 4158 aa2.46□□□□□ -2.02
SSH2-201ENST00000269033 DNAH9Q9NYC9 4486 aa2.45□□□□□ -2.02
SSH2-201ENST00000269033 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
SSH2-201ENST00000269033 LORP23490 312 aaPredicted RBP2.44□□□□□ -2.02
SSH2-201ENST00000269033 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
SSH2-201ENST00000269033 DNAH1Q9P2D7 4330 aa2.43□□□□□ -2.02
SSH2-201ENST00000269033 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
SSH2-201ENST00000269033 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
SSH2-201ENST00000269033 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
SSH2-201ENST00000269033 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
SSH2-201ENST00000269033 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
SSH2-201ENST00000269033 STARD9Q9P2P6 4700 aa2.34□□□□□ -2.03
SSH2-201ENST00000269033 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
SSH2-201ENST00000269033 PLECQ15149 4684 aaKnown RBP2.32□□□□□ -2.04
SSH2-201ENST00000269033 FAT2Q9NYQ8 4349 aa2.32□□□□□ -2.04
SSH2-201ENST00000269033 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
SSH2-201ENST00000269033 MT1HP80294 61 aa2.31□□□□□ -2.04
SSH2-201ENST00000269033 DNAH10Q8IVF4 4471 aa2.31□□□□□ -2.04
SSH2-201ENST00000269033 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
SSH2-201ENST00000269033 DNAH2Q9P225 4427 aa2.3□□□□□ -2.04
SSH2-201ENST00000269033 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
SSH2-201ENST00000269033 VPS13DQ5THJ4 4388 aa2.29□□□□□ -2.04
SSH2-201ENST00000269033 MT2AP02795 61 aa2.27□□□□□ -2.05
SSH2-201ENST00000269033 SPRR2EP22531 72 aa2.26□□□□□ -2.05
SSH2-201ENST00000269033 SPRR2BP35325 72 aa2.26□□□□□ -2.05
SSH2-201ENST00000269033 SPRR2AP35326 72 aa2.26□□□□□ -2.05
SSH2-201ENST00000269033 DNAH5Q8TE73 4624 aa2.26□□□□□ -2.05
SSH2-201ENST00000269033 KRTAP19-5Q3LI72 72 aa2.24□□□□□ -2.05
SSH2-201ENST00000269033 LCE2BO14633 110 aa2.23□□□□□ -2.05
SSH2-201ENST00000269033 SPRR2DP22532 72 aa2.23□□□□□ -2.05
SSH2-201ENST00000269033 DNAH17Q9UFH2 4485 aa2.22□□□□□ -2.05
SSH2-201ENST00000269033 DNAH11Q96DT5 4516 aa2.22□□□□□ -2.05
SSH2-201ENST00000269033 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
SSH2-201ENST00000269033 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
SSH2-201ENST00000269033 LCE3BQ5TA77 95 aa2.18□□□□□ -2.06
SSH2-201ENST00000269033 DNAH8Q96JB1 4490 aa2.17□□□□□ -2.06
SSH2-201ENST00000269033 MT1FP04733 61 aa2.17□□□□□ -2.06
SSH2-201ENST00000269033 RYR1P21817 5038 aa2.16□□□□□ -2.06
SSH2-201ENST00000269033 KRTAP19-8Q3LI54 63 aa2.15□□□□□ -2.06
SSH2-201ENST00000269033 SACSQ9NZJ4 4579 aa2.15□□□□□ -2.07
SSH2-201ENST00000269033 MT1GP13640 62 aa2.15□□□□□ -2.07
SSH2-201ENST00000269033 KRTAP4-1Q9BYQ7 146 aa2.15□□□□□ -2.07
SSH2-201ENST00000269033 PKD1P98161 4303 aa2.15□□□□□ -2.07
SSH2-201ENST00000269033 HSPG2P98160 4391 aa2.14□□□□□ -2.07
SSH2-201ENST00000269033 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
SSH2-201ENST00000269033 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
SSH2-201ENST00000269033 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
SSH2-201ENST00000269033 LCE2CQ5TA81 110 aa2.1□□□□□ -2.07
SSH2-201ENST00000269033 KRTAP17-1Q9BYP8 105 aa2.1□□□□□ -2.07
SSH2-201ENST00000269033 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.08
SSH2-201ENST00000269033 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
SSH2-201ENST00000269033 TNXBP22105 4242 aa2.06□□□□□ -2.08
SSH2-201ENST00000269033 RYR3Q15413 4870 aa2.05□□□□□ -2.08
SSH2-201ENST00000269033 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
SSH2-201ENST00000269033 LRP1Q07954 4544 aaKnown RBP2.04□□□□□ -2.08
SSH2-201ENST00000269033 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
SSH2-201ENST00000269033 APOBP04114 4563 aaKnown RBP2.03□□□□□ -2.08
SSH2-201ENST00000269033 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
SSH2-201ENST00000269033 FAT1Q14517 4588 aa2.01□□□□□ -2.09
SSH2-201ENST00000269033 MT1XP80297 61 aa2□□□□□ -2.09
SSH2-201ENST00000269033 KRTAP19-1Q8IUB9 90 aa2□□□□□ -2.09
SSH2-201ENST00000269033 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
SSH2-201ENST00000269033 MT1LQ93083 61 aa2□□□□□ -2.09
SSH2-201ENST00000269033 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
SSH2-201ENST00000269033 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
SSH2-201ENST00000269033 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.1
SSH2-201ENST00000269033 RYR2Q92736 4967 aa1.95□□□□□ -2.1
SSH2-201ENST00000269033 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
SSH2-201ENST00000269033 LPAP08519 4548 aa1.93□□□□□ -2.1
SSH2-201ENST00000269033 MT1BP07438 61 aa1.93□□□□□ -2.1
SSH2-201ENST00000269033 KRTAP9-8Q9BYQ0 159 aa1.92□□□□□ -2.1
SSH2-201ENST00000269033 KRTAP9-3Q9BYQ3 159 aa1.91□□□□□ -2.1
SSH2-201ENST00000269033 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
SSH2-201ENST00000269033 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
SSH2-201ENST00000269033 UBR4Q5T4S7 5183 aa1.89□□□□□ -2.11
SSH2-201ENST00000269033 MT1EP04732 61 aa1.88□□□□□ -2.11
SSH2-201ENST00000269033 MT4P47944 62 aa1.87□□□□□ -2.11
SSH2-201ENST00000269033 KRTAP9-6A0A140TA67 174 aa1.87□□□□□ -2.11
SSH2-201ENST00000269033 KRTAP9-2Q9BYQ4 174 aa1.87□□□□□ -2.11
SSH2-201ENST00000269033 BIRC6Q9NR09 4857 aa1.86□□□□□ -2.11
SSH2-201ENST00000269033 KRTAP19-6Q3LI70 58 aa1.86□□□□□ -2.11
SSH2-201ENST00000269033 MT1MQ8N339 61 aa1.86□□□□□ -2.11
SSH2-201ENST00000269033 ABCA13Q86UQ4 5058 aa1.85□□□□□ -2.11
SSH2-201ENST00000269033 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
SSH2-201ENST00000269033 LCE1DQ5T752 114 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms