RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 A0A1B0GVY2 172 aa8.76□□□□□ -1.01
SQLE-201ENST00000265896 KRTAP10-8P60410 259 aa8.75□□□□□ -1.01
SQLE-201ENST00000265896 TNXBP22105 4242 aa8.74□□□□□ -1.01
SQLE-201ENST00000265896 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
SQLE-201ENST00000265896 RYR3Q15413 4870 aa8.7□□□□□ -1.02
SQLE-201ENST00000265896 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
SQLE-201ENST00000265896 LRP2P98164 4655 aa8.68□□□□□ -1.02
SQLE-201ENST00000265896 KRTAP25-1Q3LHN0 102 aa8.65□□□□□ -1.02
SQLE-201ENST00000265896 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
SQLE-201ENST00000265896 RYR1P21817 5038 aa8.63□□□□□ -1.03
SQLE-201ENST00000265896 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
SQLE-201ENST00000265896 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
SQLE-201ENST00000265896 Q5VSD8 79 aa8.6□□□□□ -1.03
SQLE-201ENST00000265896 P0C880 135 aa8.6□□□□□ -1.03
SQLE-201ENST00000265896 K7ERS5 55 aa8.59□□□□□ -1.03
SQLE-201ENST00000265896 XP32Q5T750 250 aa8.56□□□□□ -1.04
SQLE-201ENST00000265896 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
SQLE-201ENST00000265896 H3BS24 57 aa8.53□□□□□ -1.04
SQLE-201ENST00000265896 S4R3F8 94 aa8.52□□□□□ -1.04
SQLE-201ENST00000265896 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
SQLE-201ENST00000265896 ABCA13Q86UQ4 5058 aa8.51□□□□□ -1.05
SQLE-201ENST00000265896 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
SQLE-201ENST00000265896 ROMO1P60602 79 aa8.45□□□□□ -1.06
SQLE-201ENST00000265896 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
SQLE-201ENST00000265896 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
SQLE-201ENST00000265896 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
SQLE-201ENST00000265896 KRTAP12-2P59991 146 aa8.4□□□□□ -1.06
SQLE-201ENST00000265896 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
SQLE-201ENST00000265896 MUC2Q02817 5179 aa8.29□□□□□ -1.08
SQLE-201ENST00000265896 KRTAP12-1P59990 96 aa8.21□□□□□ -1.09
SQLE-201ENST00000265896 KRTAP21-3Q3LHN1 58 aa8.2□□□□□ -1.1
SQLE-201ENST00000265896 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
SQLE-201ENST00000265896 M0QZ58 72 aa8.11□□□□□ -1.11
SQLE-201ENST00000265896 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
SQLE-201ENST00000265896 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
SQLE-201ENST00000265896 R4GN34 69 aa8.02□□□□□ -1.13
SQLE-201ENST00000265896 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
SQLE-201ENST00000265896 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
SQLE-201ENST00000265896 HERC2O95714 4834 aa7.94□□□□□ -1.14
SQLE-201ENST00000265896 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
SQLE-201ENST00000265896 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
SQLE-201ENST00000265896 HERC1Q15751 4861 aa7.8□□□□□ -1.16
SQLE-201ENST00000265896 J3QL48 77 aa7.78□□□□□ -1.16
SQLE-201ENST00000265896 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
SQLE-201ENST00000265896 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
SQLE-201ENST00000265896 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
SQLE-201ENST00000265896 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
SQLE-201ENST00000265896 PLAC4Q8WY50 150 aa7.59□□□□□ -1.2
SQLE-201ENST00000265896 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
SQLE-201ENST00000265896 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
SQLE-201ENST00000265896 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
SQLE-201ENST00000265896 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
SQLE-201ENST00000265896 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
SQLE-201ENST00000265896 M0R2T5 61 aa7.26□□□□□ -1.25
SQLE-201ENST00000265896 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
SQLE-201ENST00000265896 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
SQLE-201ENST00000265896 TNP1P09430 55 aa7.23□□□□□ -1.25
SQLE-201ENST00000265896 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
SQLE-201ENST00000265896 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
SQLE-201ENST00000265896 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
SQLE-201ENST00000265896 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
SQLE-201ENST00000265896 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
SQLE-201ENST00000265896 MT1FP04733 61 aa6.96□□□□□ -1.3
SQLE-201ENST00000265896 USH2AO75445 5202 aa6.95□□□□□ -1.3
SQLE-201ENST00000265896 MT1HP80294 61 aa6.95□□□□□ -1.3
SQLE-201ENST00000265896 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
SQLE-201ENST00000265896 MT2AP02795 61 aa6.88□□□□□ -1.31
SQLE-201ENST00000265896 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
SQLE-201ENST00000265896 KMT2DO14686 5537 aa6.86□□□□□ -1.31
SQLE-201ENST00000265896 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
SQLE-201ENST00000265896 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
SQLE-201ENST00000265896 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
SQLE-201ENST00000265896 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
SQLE-201ENST00000265896 MT1BP07438 61 aa6.66□□□□□ -1.34
SQLE-201ENST00000265896 MT1XP80297 61 aa6.66□□□□□ -1.34
SQLE-201ENST00000265896 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
SQLE-201ENST00000265896 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
SQLE-201ENST00000265896 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SQLE-201ENST00000265896 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
SQLE-201ENST00000265896 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
SQLE-201ENST00000265896 KRTAP8-1Q8IUC2 63 aa6.54□□□□□ -1.36
SQLE-201ENST00000265896 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
SQLE-201ENST00000265896 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
SQLE-201ENST00000265896 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
SQLE-201ENST00000265896 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
SQLE-201ENST00000265896 LCE2BO14633 110 aa6.32□□□□□ -1.4
SQLE-201ENST00000265896 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
SQLE-201ENST00000265896 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
SQLE-201ENST00000265896 LCE2AQ5TA79 106 aaPredicted RBP6.19□□□□□ -1.42
SQLE-201ENST00000265896 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
SQLE-201ENST00000265896 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
SQLE-201ENST00000265896 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
SQLE-201ENST00000265896 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
SQLE-201ENST00000265896 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
SQLE-201ENST00000265896 INE1O15225 51 aa5.98□□□□□ -1.45
SQLE-201ENST00000265896 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
SQLE-201ENST00000265896 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
SQLE-201ENST00000265896 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
SQLE-201ENST00000265896 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
SQLE-201ENST00000265896 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms