RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
SLF1-201ENST00000265140 VPS13DQ5THJ4 4388 aa3.21□□□□□ -1.9
SLF1-201ENST00000265140 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
SLF1-201ENST00000265140 DNAH10Q8IVF4 4471 aa3.2□□□□□ -1.9
SLF1-201ENST00000265140 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
SLF1-201ENST00000265140 DNAH17Q9UFH2 4485 aa3.18□□□□□ -1.9
SLF1-201ENST00000265140 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.9
SLF1-201ENST00000265140 MT1HL1P0DM35 61 aa3.15□□□□□ -1.91
SLF1-201ENST00000265140 KRTAP3-2Q9BYR7 98 aa3.15□□□□□ -1.91
SLF1-201ENST00000265140 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.91
SLF1-201ENST00000265140 KRTAP3-3Q9BYR6 98 aa3.14□□□□□ -1.91
SLF1-201ENST00000265140 DNAH8Q96JB1 4490 aa3.12□□□□□ -1.91
SLF1-201ENST00000265140 STARD9Q9P2P6 4700 aa3.12□□□□□ -1.91
SLF1-201ENST00000265140 DNAH2Q9P225 4427 aa3.11□□□□□ -1.91
SLF1-201ENST00000265140 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
SLF1-201ENST00000265140 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
SLF1-201ENST00000265140 DNAH5Q8TE73 4624 aa3.1□□□□□ -1.91
SLF1-201ENST00000265140 KRTAP10-12P60413 245 aa3.09□□□□□ -1.92
SLF1-201ENST00000265140 FAT1Q14517 4588 aa3.08□□□□□ -1.92
SLF1-201ENST00000265140 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
SLF1-201ENST00000265140 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
SLF1-201ENST00000265140 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
SLF1-201ENST00000265140 LYSTQ99698 3801 aa3.05□□□□□ -1.92
SLF1-201ENST00000265140 RYR1P21817 5038 aa3.03□□□□□ -1.92
SLF1-201ENST00000265140 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
SLF1-201ENST00000265140 KMT2AQ03164 3969 aa3□□□□□ -1.93
SLF1-201ENST00000265140 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
SLF1-201ENST00000265140 FRAS1Q86XX4 4008 aa2.99□□□□□ -1.93
SLF1-201ENST00000265140 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
SLF1-201ENST00000265140 KRTAP4-5Q9BYR2 181 aa2.98□□□□□ -1.93
SLF1-201ENST00000265140 SACSQ9NZJ4 4579 aa2.98□□□□□ -1.93
SLF1-201ENST00000265140 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
SLF1-201ENST00000265140 KRTAP17-1Q9BYP8 105 aa2.96□□□□□ -1.94
SLF1-201ENST00000265140 DYNC1H1Q14204 4646 aaKnown RBP2.95□□□□□ -1.94
SLF1-201ENST00000265140 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
SLF1-201ENST00000265140 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
SLF1-201ENST00000265140 PKD1P98161 4303 aa2.92□□□□□ -1.94
SLF1-201ENST00000265140 LORP23490 312 aaPredicted RBP2.92□□□□□ -1.94
SLF1-201ENST00000265140 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
SLF1-201ENST00000265140 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
SLF1-201ENST00000265140 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
SLF1-201ENST00000265140 APOBP04114 4563 aaKnown RBP2.88□□□□□ -1.95
SLF1-201ENST00000265140 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
SLF1-201ENST00000265140 KRTAP8-1Q8IUC2 63 aa2.86□□□□□ -1.95
SLF1-201ENST00000265140 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
SLF1-201ENST00000265140 RYR3Q15413 4870 aa2.85□□□□□ -1.95
SLF1-201ENST00000265140 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
SLF1-201ENST00000265140 RYR2Q92736 4967 aa2.82□□□□□ -1.96
SLF1-201ENST00000265140 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
SLF1-201ENST00000265140 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
SLF1-201ENST00000265140 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
SLF1-201ENST00000265140 LRP2P98164 4655 aa2.78□□□□□ -1.96
SLF1-201ENST00000265140 KMT2CQ8NEZ4 4911 aaKnown RBP2.77□□□□□ -1.97
SLF1-201ENST00000265140 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
SLF1-201ENST00000265140 TNXBP22105 4242 aa2.75□□□□□ -1.97
SLF1-201ENST00000265140 HERC2O95714 4834 aa2.74□□□□□ -1.97
SLF1-201ENST00000265140 HSPG2P98160 4391 aa2.73□□□□□ -1.97
SLF1-201ENST00000265140 SPRR2GQ9BYE4 73 aa2.69□□□□□ -1.98
SLF1-201ENST00000265140 MT2AP02795 61 aa2.66□□□□□ -1.98
SLF1-201ENST00000265140 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
SLF1-201ENST00000265140 MT1HP80294 61 aa2.64□□□□□ -1.99
SLF1-201ENST00000265140 MT1FP04733 61 aa2.62□□□□□ -1.99
SLF1-201ENST00000265140 KRTAP19-1Q8IUB9 90 aa2.61□□□□□ -1.99
SLF1-201ENST00000265140 MUC17Q685J3 4493 aa2.6□□□□□ -1.99
SLF1-201ENST00000265140 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
SLF1-201ENST00000265140 EPPK1P58107 5090 aaKnown RBP2.59□□□□□ -1.99
SLF1-201ENST00000265140 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
SLF1-201ENST00000265140 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
SLF1-201ENST00000265140 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
SLF1-201ENST00000265140 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
SLF1-201ENST00000265140 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2.01
SLF1-201ENST00000265140 FSIP2Q5CZC0 6907 aa2.51□□□□□ -2.01
SLF1-201ENST00000265140 HERC1Q15751 4861 aa2.5□□□□□ -2.01
SLF1-201ENST00000265140 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
SLF1-201ENST00000265140 LCE3BQ5TA77 95 aa2.49□□□□□ -2.01
SLF1-201ENST00000265140 BIRC6Q9NR09 4857 aa2.49□□□□□ -2.01
SLF1-201ENST00000265140 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
SLF1-201ENST00000265140 LCE2CQ5TA81 110 aa2.47□□□□□ -2.01
SLF1-201ENST00000265140 SPRR2EP22531 72 aa2.47□□□□□ -2.01
SLF1-201ENST00000265140 SPRR2BP35325 72 aa2.47□□□□□ -2.01
SLF1-201ENST00000265140 SPRR2AP35326 72 aa2.47□□□□□ -2.01
SLF1-201ENST00000265140 LPAP08519 4548 aa2.46□□□□□ -2.02
SLF1-201ENST00000265140 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
SLF1-201ENST00000265140 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.02
SLF1-201ENST00000265140 MT1BP07438 61 aa2.46□□□□□ -2.02
SLF1-201ENST00000265140 KRTAP12-4P60329 112 aa2.46□□□□□ -2.02
SLF1-201ENST00000265140 MT1XP80297 61 aa2.45□□□□□ -2.02
SLF1-201ENST00000265140 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
SLF1-201ENST00000265140 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
SLF1-201ENST00000265140 SPRR2DP22532 72 aa2.4□□□□□ -2.02
SLF1-201ENST00000265140 MUC2Q02817 5179 aa2.4□□□□□ -2.03
SLF1-201ENST00000265140 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
SLF1-201ENST00000265140 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
SLF1-201ENST00000265140 KRTAP9-3Q9BYQ3 159 aa2.37□□□□□ -2.03
SLF1-201ENST00000265140 LCE2BO14633 110 aa2.36□□□□□ -2.03
SLF1-201ENST00000265140 KRTAP4-8A0A0G2JLE6 195 aa2.35□□□□□ -2.03
SLF1-201ENST00000265140 KRTAP4-8Q9BYQ9 185 aa2.35□□□□□ -2.03
SLF1-201ENST00000265140 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SLF1-201ENST00000265140 MT1GP13640 62 aa2.35□□□□□ -2.03
SLF1-201ENST00000265140 MT3P25713 68 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms