RNA–Protein interactions for RNA: ENST00000264938.7

SLC9A3-201, Transcript of solute carrier family 9 member A3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC9A3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3-201ENST00000264938 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
SLC9A3-201ENST00000264938 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
SLC9A3-201ENST00000264938 KRTAP3-2Q9BYR7 98 aa11.97□□□□□ -0.49
SLC9A3-201ENST00000264938 C10orf95Q9H7T3 257 aa11.96□□□□□ -0.49
SLC9A3-201ENST00000264938 SPINT4Q6UDR6 99 aa11.94□□□□□ -0.5
SLC9A3-201ENST00000264938 HSPG2P98160 4391 aa11.88□□□□□ -0.51
SLC9A3-201ENST00000264938 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
SLC9A3-201ENST00000264938 FAT3Q8TDW7 4589 aa11.82□□□□□ -0.52
SLC9A3-201ENST00000264938 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
SLC9A3-201ENST00000264938 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
SLC9A3-201ENST00000264938 KRTAP12-2P59991 146 aa11.74□□□□□ -0.53
SLC9A3-201ENST00000264938 S4R3F8 94 aa11.74□□□□□ -0.53
SLC9A3-201ENST00000264938 KRTAP15-1Q3LI76 137 aa11.74□□□□□ -0.53
SLC9A3-201ENST00000264938 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
SLC9A3-201ENST00000264938 NDUFAF8A1L188 74 aa11.69□□□□□ -0.54
SLC9A3-201ENST00000264938 TNXBP22105 4242 aa11.65□□□□□ -0.54
SLC9A3-201ENST00000264938 KRTAP12-1P59990 96 aa11.58□□□□□ -0.56
SLC9A3-201ENST00000264938 A0A1B0GVY2 172 aa11.53□□□□□ -0.56
SLC9A3-201ENST00000264938 KRTAP21-3Q3LHN1 58 aa11.53□□□□□ -0.56
SLC9A3-201ENST00000264938 XP32Q5T750 250 aa11.52□□□□□ -0.57
SLC9A3-201ENST00000264938 LPAP08519 4548 aa11.43□□□□□ -0.58
SLC9A3-201ENST00000264938 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
SLC9A3-201ENST00000264938 M0QZ58 72 aa11.26□□□□□ -0.61
SLC9A3-201ENST00000264938 RYR2Q92736 4967 aa11.18□□□□□ -0.62
SLC9A3-201ENST00000264938 LRP2P98164 4655 aa11.17□□□□□ -0.62
SLC9A3-201ENST00000264938 Q5VSD8 79 aa11.1□□□□□ -0.63
SLC9A3-201ENST00000264938 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
SLC9A3-201ENST00000264938 PLAC4Q8WY50 150 aa10.94□□□□□ -0.66
SLC9A3-201ENST00000264938 R4GN34 69 aa10.94□□□□□ -0.66
SLC9A3-201ENST00000264938 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
SLC9A3-201ENST00000264938 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
SLC9A3-201ENST00000264938 RYR1P21817 5038 aa10.87□□□□□ -0.67
SLC9A3-201ENST00000264938 KIAA1109Q2LD37 5005 aa10.72□□□□□ -0.69
SLC9A3-201ENST00000264938 RYR3Q15413 4870 aa10.69□□□□□ -0.7
SLC9A3-201ENST00000264938 MUC17Q685J3 4493 aa10.64□□□□□ -0.71
SLC9A3-201ENST00000264938 ABCA13Q86UQ4 5058 aa10.63□□□□□ -0.71
SLC9A3-201ENST00000264938 LUZP6Q538Z0 58 aa10.59□□□□□ -0.71
SLC9A3-201ENST00000264938 A0A0A0MQY5 61 aa10.54□□□□□ -0.72
SLC9A3-201ENST00000264938 PP632Q6XCG6 107 aa10.48□□□□□ -0.73
SLC9A3-201ENST00000264938 CAMK2N1Q7Z7J9 78 aa10.46□□□□□ -0.74
SLC9A3-201ENST00000264938 KRTAP4-1Q9BYQ7 146 aa10.43□□□□□ -0.74
SLC9A3-201ENST00000264938 SEC61BP60468 96 aaKnown RBP10.31□□□□□ -0.76
SLC9A3-201ENST00000264938 KRTAP19-2Q3LHN2 52 aa10.27□□□□□ -0.77
SLC9A3-201ENST00000264938 EPPK1P58107 5090 aaKnown RBP10.2□□□□□ -0.78
SLC9A3-201ENST00000264938 KRTAP4-5Q9BYR2 181 aa10.19□□□□□ -0.78
SLC9A3-201ENST00000264938 MUC2Q02817 5179 aa10.11□□□□□ -0.79
SLC9A3-201ENST00000264938 TNP1P09430 55 aa10.1□□□□□ -0.79
SLC9A3-201ENST00000264938 SPRR5A0A1B0GTR4 108 aa10.08□□□□□ -0.8
SLC9A3-201ENST00000264938 FLGP20930 4061 aaPredicted RBP10.04□□□□□ -0.8
SLC9A3-201ENST00000264938 KRTAP23-1A1A580 65 aa9.97□□□□□ -0.81
SLC9A3-201ENST00000264938 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
SLC9A3-201ENST00000264938 HERC1Q15751 4861 aa9.86□□□□□ -0.83
SLC9A3-201ENST00000264938 J3QL48 77 aa9.74□□□□□ -0.85
SLC9A3-201ENST00000264938 HERC2O95714 4834 aa9.69□□□□□ -0.86
SLC9A3-201ENST00000264938 BIRC6Q9NR09 4857 aa9.64□□□□□ -0.87
SLC9A3-201ENST00000264938 LCE3AQ5TA76 89 aa9.61□□□□□ -0.87
SLC9A3-201ENST00000264938 FAT4Q6V0I7 4981 aa9.58□□□□□ -0.88
SLC9A3-201ENST00000264938 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
SLC9A3-201ENST00000264938 SPRR2GQ9BYE4 73 aa9.54□□□□□ -0.88
SLC9A3-201ENST00000264938 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
SLC9A3-201ENST00000264938 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
SLC9A3-201ENST00000264938 KRTAP8-1Q8IUC2 63 aa9.27□□□□□ -0.92
SLC9A3-201ENST00000264938 HMCN2Q8NDA2 5059 aa9.26□□□□□ -0.93
SLC9A3-201ENST00000264938 UBR4Q5T4S7 5183 aa9.2□□□□□ -0.94
SLC9A3-201ENST00000264938 INE1O15225 51 aa9.2□□□□□ -0.94
SLC9A3-201ENST00000264938 M0R2T5 61 aa9.19□□□□□ -0.94
SLC9A3-201ENST00000264938 MT1FP04733 61 aa9.16□□□□□ -0.94
SLC9A3-201ENST00000264938 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
SLC9A3-201ENST00000264938 MT2AP02795 61 aa9.1□□□□□ -0.95
SLC9A3-201ENST00000264938 MT1HP80294 61 aa9.09□□□□□ -0.95
SLC9A3-201ENST00000264938 KRTAP12-3P60328 96 aa9.07□□□□□ -0.96
SLC9A3-201ENST00000264938 KRTAP10-5P60370 271 aa9.06□□□□□ -0.96
SLC9A3-201ENST00000264938 MT1XP80297 61 aa9.03□□□□□ -0.96
SLC9A3-201ENST00000264938 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
SLC9A3-201ENST00000264938 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
SLC9A3-201ENST00000264938 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
SLC9A3-201ENST00000264938 KRTAP9-8Q9BYQ0 159 aa8.99□□□□□ -0.97
SLC9A3-201ENST00000264938 MT1BP07438 61 aa8.96□□□□□ -0.97
SLC9A3-201ENST00000264938 KRTAP10-7P60409 375 aaPredicted RBP8.88□□□□□ -0.99
SLC9A3-201ENST00000264938 KRTAP19-5Q3LI72 72 aa8.57□□□□□ -1.04
SLC9A3-201ENST00000264938 LCE3CQ5T5A8 94 aa8.57□□□□□ -1.04
SLC9A3-201ENST00000264938 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
SLC9A3-201ENST00000264938 KMT2DO14686 5537 aa8.5□□□□□ -1.05
SLC9A3-201ENST00000264938 KRTAP9-6A8MVA2 160 aa8.43□□□□□ -1.06
SLC9A3-201ENST00000264938 USH2AO75445 5202 aa8.3□□□□□ -1.08
SLC9A3-201ENST00000264938 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
SLC9A3-201ENST00000264938 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
SLC9A3-201ENST00000264938 KRTAP2-3P0C7H8 128 aa8.21□□□□□ -1.1
SLC9A3-201ENST00000264938 KRTAP2-4Q9BYR9 128 aa8.21□□□□□ -1.1
SLC9A3-201ENST00000264938 KRTAP2-1Q9BYU5 128 aa8.21□□□□□ -1.1
SLC9A3-201ENST00000264938 LCE2BO14633 110 aa8.19□□□□□ -1.1
SLC9A3-201ENST00000264938 KRTAP4-7Q9BYR0 210 aa8.18□□□□□ -1.1
SLC9A3-201ENST00000264938 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
SLC9A3-201ENST00000264938 MT1LQ93083 61 aa7.83□□□□□ -1.16
SLC9A3-201ENST00000264938 MT1EP04732 61 aa7.74□□□□□ -1.17
SLC9A3-201ENST00000264938 KRTAP19-4Q3LI73 84 aa7.66□□□□□ -1.18
SLC9A3-201ENST00000264938 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
SLC9A3-201ENST00000264938 LCE2AQ5TA79 106 aaPredicted RBP7.61□□□□□ -1.19
SLC9A3-201ENST00000264938 KRTAP4-3Q9BYR4 195 aa7.52□□□□□ -1.21
SLC9A3-201ENST00000264938 MT1GP13640 62 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms