RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
USP13-201ENST00000263966 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
USP13-201ENST00000263966 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
USP13-201ENST00000263966 DNAH1Q9P2D7 4330 aa6.82□□□□□ -1.32
USP13-201ENST00000263966 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
USP13-201ENST00000263966 LYSTQ99698 3801 aa6.69□□□□□ -1.34
USP13-201ENST00000263966 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
USP13-201ENST00000263966 CMYA5Q8N3K9 4069 aa6.62□□□□□ -1.35
USP13-201ENST00000263966 ANK3Q12955 4377 aaKnown RBP6.61□□□□□ -1.35
USP13-201ENST00000263966 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
USP13-201ENST00000263966 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
USP13-201ENST00000263966 ZNF469Q96JG9 3925 aaPredicted RBP6.51□□□□□ -1.37
USP13-201ENST00000263966 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
USP13-201ENST00000263966 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
USP13-201ENST00000263966 MT1HP80294 61 aa6.44□□□□□ -1.38
USP13-201ENST00000263966 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
USP13-201ENST00000263966 ANK2Q01484 3957 aa6.43□□□□□ -1.38
USP13-201ENST00000263966 SPRR2EP22531 72 aa6.41□□□□□ -1.38
USP13-201ENST00000263966 SPRR2BP35325 72 aa6.41□□□□□ -1.38
USP13-201ENST00000263966 SPRR2AP35326 72 aa6.41□□□□□ -1.38
USP13-201ENST00000263966 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
USP13-201ENST00000263966 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
USP13-201ENST00000263966 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
USP13-201ENST00000263966 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
USP13-201ENST00000263966 KMT2AQ03164 3969 aa6.29□□□□□ -1.4
USP13-201ENST00000263966 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
USP13-201ENST00000263966 SPRR2DP22532 72 aa6.25□□□□□ -1.41
USP13-201ENST00000263966 MT2AP02795 61 aa6.23□□□□□ -1.41
USP13-201ENST00000263966 LCE2BO14633 110 aa6.21□□□□□ -1.42
USP13-201ENST00000263966 FRAS1Q86XX4 4008 aa6.2□□□□□ -1.42
USP13-201ENST00000263966 DNAH6Q9C0G6 4158 aa6.19□□□□□ -1.42
USP13-201ENST00000263966 HECTD4Q9Y4D8 3996 aa6.16□□□□□ -1.42
USP13-201ENST00000263966 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
USP13-201ENST00000263966 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
USP13-201ENST00000263966 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
USP13-201ENST00000263966 MT1FP04733 61 aa6.03□□□□□ -1.44
USP13-201ENST00000263966 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
USP13-201ENST00000263966 DNAH9Q9NYC9 4486 aa5.91□□□□□ -1.46
USP13-201ENST00000263966 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
USP13-201ENST00000263966 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
USP13-201ENST00000263966 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
USP13-201ENST00000263966 DNAH10Q8IVF4 4471 aa5.77□□□□□ -1.49
USP13-201ENST00000263966 DNAH17Q9UFH2 4485 aa5.75□□□□□ -1.49
USP13-201ENST00000263966 MT1GP13640 62 aa5.75□□□□□ -1.49
USP13-201ENST00000263966 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
USP13-201ENST00000263966 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
USP13-201ENST00000263966 VPS13DQ5THJ4 4388 aa5.7□□□□□ -1.5
USP13-201ENST00000263966 KRTAP19-8Q3LI54 63 aa5.67□□□□□ -1.5
USP13-201ENST00000263966 DNAH11Q96DT5 4516 aa5.61□□□□□ -1.51
USP13-201ENST00000263966 PKHD1L1Q86WI1 4243 aa5.59□□□□□ -1.51
USP13-201ENST00000263966 DNAH8Q96JB1 4490 aa5.58□□□□□ -1.52
USP13-201ENST00000263966 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
USP13-201ENST00000263966 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
USP13-201ENST00000263966 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
USP13-201ENST00000263966 MT1XP80297 61 aa5.52□□□□□ -1.53
USP13-201ENST00000263966 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
USP13-201ENST00000263966 MT4P47944 62 aa5.47□□□□□ -1.53
USP13-201ENST00000263966 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
USP13-201ENST00000263966 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
USP13-201ENST00000263966 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
USP13-201ENST00000263966 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
USP13-201ENST00000263966 MT3P25713 68 aa5.36□□□□□ -1.55
USP13-201ENST00000263966 MT1LQ93083 61 aa5.33□□□□□ -1.56
USP13-201ENST00000263966 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
USP13-201ENST00000263966 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
USP13-201ENST00000263966 PLECQ15149 4684 aaKnown RBP5.28□□□□□ -1.56
USP13-201ENST00000263966 LCE1BQ5T7P3 118 aa5.28□□□□□ -1.56
USP13-201ENST00000263966 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
USP13-201ENST00000263966 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
USP13-201ENST00000263966 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
USP13-201ENST00000263966 MT1BP07438 61 aa5.26□□□□□ -1.57
USP13-201ENST00000263966 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
USP13-201ENST00000263966 KRTAP9-3Q9BYQ3 159 aa5.21□□□□□ -1.58
USP13-201ENST00000263966 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
USP13-201ENST00000263966 PKD1P98161 4303 aa5.18□□□□□ -1.58
USP13-201ENST00000263966 FAT1Q14517 4588 aa5.15□□□□□ -1.59
USP13-201ENST00000263966 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
USP13-201ENST00000263966 MT1EP04732 61 aa5.08□□□□□ -1.6
USP13-201ENST00000263966 DYNC1H1Q14204 4646 aaKnown RBP5.07□□□□□ -1.6
USP13-201ENST00000263966 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
USP13-201ENST00000263966 PRM1P04553 51 aa5.06□□□□□ -1.6
USP13-201ENST00000263966 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
USP13-201ENST00000263966 FAT3Q8TDW7 4589 aa5.02□□□□□ -1.61
USP13-201ENST00000263966 SACSQ9NZJ4 4579 aa5.02□□□□□ -1.61
USP13-201ENST00000263966 MT1MQ8N339 61 aa5□□□□□ -1.61
USP13-201ENST00000263966 HSPG2P98160 4391 aa4.99□□□□□ -1.61
USP13-201ENST00000263966 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
USP13-201ENST00000263966 TNXBP22105 4242 aa4.97□□□□□ -1.61
USP13-201ENST00000263966 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
USP13-201ENST00000263966 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
USP13-201ENST00000263966 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
USP13-201ENST00000263966 LCE1FQ5T754 118 aa4.83□□□□□ -1.64
USP13-201ENST00000263966 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
USP13-201ENST00000263966 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
USP13-201ENST00000263966 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
USP13-201ENST00000263966 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
USP13-201ENST00000263966 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
USP13-201ENST00000263966 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
USP13-201ENST00000263966 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
USP13-201ENST00000263966 MT1AP04731 61 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms