RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
SEC23B-201ENST00000262544 ROMO1P60602 79 aa6.8□□□□□ -1.32
SEC23B-201ENST00000262544 RYR2Q92736 4967 aa6.79□□□□□ -1.32
SEC23B-201ENST00000262544 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
SEC23B-201ENST00000262544 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
SEC23B-201ENST00000262544 Q5VSD8 79 aa6.78□□□□□ -1.32
SEC23B-201ENST00000262544 LPAP08519 4548 aa6.73□□□□□ -1.33
SEC23B-201ENST00000262544 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
SEC23B-201ENST00000262544 K7ERS5 55 aa6.72□□□□□ -1.33
SEC23B-201ENST00000262544 RYR3Q15413 4870 aa6.7□□□□□ -1.34
SEC23B-201ENST00000262544 LRP2P98164 4655 aa6.68□□□□□ -1.34
SEC23B-201ENST00000262544 XP32Q5T750 250 aa6.65□□□□□ -1.34
SEC23B-201ENST00000262544 RYR1P21817 5038 aa6.65□□□□□ -1.35
SEC23B-201ENST00000262544 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
SEC23B-201ENST00000262544 S4R3F8 94 aa6.64□□□□□ -1.35
SEC23B-201ENST00000262544 P0C880 135 aa6.63□□□□□ -1.35
SEC23B-201ENST00000262544 TNXBP22105 4242 aa6.62□□□□□ -1.35
SEC23B-201ENST00000262544 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
SEC23B-201ENST00000262544 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
SEC23B-201ENST00000262544 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
SEC23B-201ENST00000262544 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
SEC23B-201ENST00000262544 KRTAP10-6P60371 365 aaPredicted RBP6.57□□□□□ -1.36
SEC23B-201ENST00000262544 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
SEC23B-201ENST00000262544 ABCA13Q86UQ4 5058 aa6.55□□□□□ -1.36
SEC23B-201ENST00000262544 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
SEC23B-201ENST00000262544 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
SEC23B-201ENST00000262544 TPRXLQ17RH7 258 aa6.48□□□□□ -1.37
SEC23B-201ENST00000262544 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
SEC23B-201ENST00000262544 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
SEC23B-201ENST00000262544 MUC2Q02817 5179 aa6.41□□□□□ -1.38
SEC23B-201ENST00000262544 KRTAP4-5Q9BYR2 181 aa6.38□□□□□ -1.39
SEC23B-201ENST00000262544 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
SEC23B-201ENST00000262544 A0A0A0MQY5 61 aa6.36□□□□□ -1.39
SEC23B-201ENST00000262544 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.4
SEC23B-201ENST00000262544 M0QZ58 72 aa6.33□□□□□ -1.4
SEC23B-201ENST00000262544 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
SEC23B-201ENST00000262544 R4GN34 69 aa6.29□□□□□ -1.4
SEC23B-201ENST00000262544 J3QL48 77 aa6.24□□□□□ -1.41
SEC23B-201ENST00000262544 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
SEC23B-201ENST00000262544 HERC2O95714 4834 aa6.18□□□□□ -1.42
SEC23B-201ENST00000262544 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
SEC23B-201ENST00000262544 SEC61BP60468 96 aaKnown RBP6.11□□□□□ -1.43
SEC23B-201ENST00000262544 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
SEC23B-201ENST00000262544 HERC1Q15751 4861 aa6.06□□□□□ -1.44
SEC23B-201ENST00000262544 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
SEC23B-201ENST00000262544 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
SEC23B-201ENST00000262544 RNF213Q63HN8 5207 aa5.99□□□□□ -1.45
SEC23B-201ENST00000262544 BIRC6Q9NR09 4857 aa5.97□□□□□ -1.45
SEC23B-201ENST00000262544 PCLOQ9Y6V0 5065 aa5.92□□□□□ -1.46
SEC23B-201ENST00000262544 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
SEC23B-201ENST00000262544 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
SEC23B-201ENST00000262544 M0R2T5 61 aa5.81□□□□□ -1.48
SEC23B-201ENST00000262544 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
SEC23B-201ENST00000262544 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
SEC23B-201ENST00000262544 FLGP20930 4061 aaPredicted RBP5.72□□□□□ -1.49
SEC23B-201ENST00000262544 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
SEC23B-201ENST00000262544 TNP1P09430 55 aa5.64□□□□□ -1.51
SEC23B-201ENST00000262544 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
SEC23B-201ENST00000262544 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
SEC23B-201ENST00000262544 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
SEC23B-201ENST00000262544 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
SEC23B-201ENST00000262544 MT1HP80294 61 aa5.41□□□□□ -1.54
SEC23B-201ENST00000262544 USH2AO75445 5202 aa5.4□□□□□ -1.54
SEC23B-201ENST00000262544 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.55
SEC23B-201ENST00000262544 MT1FP04733 61 aa5.39□□□□□ -1.55
SEC23B-201ENST00000262544 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
SEC23B-201ENST00000262544 MT2AP02795 61 aa5.34□□□□□ -1.55
SEC23B-201ENST00000262544 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
SEC23B-201ENST00000262544 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
SEC23B-201ENST00000262544 KMT2DO14686 5537 aa5.3□□□□□ -1.56
SEC23B-201ENST00000262544 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
SEC23B-201ENST00000262544 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
SEC23B-201ENST00000262544 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
SEC23B-201ENST00000262544 MT1BP07438 61 aa5.13□□□□□ -1.59
SEC23B-201ENST00000262544 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
SEC23B-201ENST00000262544 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
SEC23B-201ENST00000262544 MT1XP80297 61 aa5.12□□□□□ -1.59
SEC23B-201ENST00000262544 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
SEC23B-201ENST00000262544 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
SEC23B-201ENST00000262544 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
SEC23B-201ENST00000262544 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
SEC23B-201ENST00000262544 INE1O15225 51 aa5.01□□□□□ -1.61
SEC23B-201ENST00000262544 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
SEC23B-201ENST00000262544 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
SEC23B-201ENST00000262544 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
SEC23B-201ENST00000262544 LCE2BO14633 110 aa4.9□□□□□ -1.63
SEC23B-201ENST00000262544 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
SEC23B-201ENST00000262544 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
SEC23B-201ENST00000262544 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
SEC23B-201ENST00000262544 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
SEC23B-201ENST00000262544 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SEC23B-201ENST00000262544 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
SEC23B-201ENST00000262544 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
SEC23B-201ENST00000262544 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
SEC23B-201ENST00000262544 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
SEC23B-201ENST00000262544 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
SEC23B-201ENST00000262544 KRTAP19-7Q3SYF9 63 aa4.55□□□□□ -1.68
SEC23B-201ENST00000262544 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
SEC23B-201ENST00000262544 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
SEC23B-201ENST00000262544 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms