RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 LPAP08519 4548 aa10.18□□□□□ -0.78
SMAD7-201ENST00000262158 CRIPTQ9P021 101 aa10.15□□□□□ -0.78
SMAD7-201ENST00000262158 H0YAA0 97 aa10.13□□□□□ -0.79
SMAD7-201ENST00000262158 Q5VSD8 79 aa10.13□□□□□ -0.79
SMAD7-201ENST00000262158 RYR1P21817 5038 aa10.08□□□□□ -0.8
SMAD7-201ENST00000262158 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
SMAD7-201ENST00000262158 COX6B2Q6YFQ2 88 aa10.01□□□□□ -0.81
SMAD7-201ENST00000262158 EPPK1P58107 5090 aaKnown RBP10□□□□□ -0.81
SMAD7-201ENST00000262158 LRP2P98164 4655 aa10□□□□□ -0.81
SMAD7-201ENST00000262158 A0A1B0GU33 70 aa10□□□□□ -0.81
SMAD7-201ENST00000262158 XP32Q5T750 250 aa9.94□□□□□ -0.82
SMAD7-201ENST00000262158 H1FX-AS1Q4G0G2 97 aa9.94□□□□□ -0.82
SMAD7-201ENST00000262158 ABCA13Q86UQ4 5058 aa9.93□□□□□ -0.82
SMAD7-201ENST00000262158 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
SMAD7-201ENST00000262158 RPL37P61927 97 aaKnown RBP9.87□□□□□ -0.83
SMAD7-201ENST00000262158 A0A0A0MQY5 61 aa9.83□□□□□ -0.84
SMAD7-201ENST00000262158 A0A0D9SG42 100 aa9.83□□□□□ -0.84
SMAD7-201ENST00000262158 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
SMAD7-201ENST00000262158 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
SMAD7-201ENST00000262158 KRTAP13-4Q3LI77 160 aa9.81□□□□□ -0.84
SMAD7-201ENST00000262158 KRTAP10-6P60371 365 aaPredicted RBP9.77□□□□□ -0.84
SMAD7-201ENST00000262158 P0C880 135 aa9.73□□□□□ -0.85
SMAD7-201ENST00000262158 S4R3F8 94 aa9.72□□□□□ -0.85
SMAD7-201ENST00000262158 K7ERS5 55 aa9.71□□□□□ -0.86
SMAD7-201ENST00000262158 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.86
SMAD7-201ENST00000262158 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
SMAD7-201ENST00000262158 ROMO1P60602 79 aa9.68□□□□□ -0.86
SMAD7-201ENST00000262158 C10orf95Q9H7T3 257 aa9.54□□□□□ -0.88
SMAD7-201ENST00000262158 SPINT4Q6UDR6 99 aa9.52□□□□□ -0.89
SMAD7-201ENST00000262158 MUC2Q02817 5179 aa9.49□□□□□ -0.89
SMAD7-201ENST00000262158 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
SMAD7-201ENST00000262158 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
SMAD7-201ENST00000262158 HERC2O95714 4834 aa9.35□□□□□ -0.91
SMAD7-201ENST00000262158 MUC17Q685J3 4493 aa9.32□□□□□ -0.92
SMAD7-201ENST00000262158 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
SMAD7-201ENST00000262158 KRTAP12-1P59990 96 aa9.28□□□□□ -0.92
SMAD7-201ENST00000262158 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
SMAD7-201ENST00000262158 NDUFAF8A1L188 74 aa9.22□□□□□ -0.93
SMAD7-201ENST00000262158 M0QZ58 72 aa9.17□□□□□ -0.94
SMAD7-201ENST00000262158 J3QL48 77 aa9.16□□□□□ -0.94
SMAD7-201ENST00000262158 HERC1Q15751 4861 aa9.14□□□□□ -0.95
SMAD7-201ENST00000262158 R4GN34 69 aa9.08□□□□□ -0.96
SMAD7-201ENST00000262158 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
SMAD7-201ENST00000262158 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
SMAD7-201ENST00000262158 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
SMAD7-201ENST00000262158 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
SMAD7-201ENST00000262158 KRTAP19-2Q3LHN2 52 aa8.92□□□□□ -0.98
SMAD7-201ENST00000262158 BIRC6Q9NR09 4857 aa8.84□□□□□ -0.99
SMAD7-201ENST00000262158 RNF213Q63HN8 5207 aa8.83□□□□□ -1
SMAD7-201ENST00000262158 HMCN2Q8NDA2 5059 aa8.76□□□□□ -1.01
SMAD7-201ENST00000262158 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
SMAD7-201ENST00000262158 LUZP6Q538Z0 58 aa8.69□□□□□ -1.02
SMAD7-201ENST00000262158 UBR4Q5T4S7 5183 aa8.66□□□□□ -1.02
SMAD7-201ENST00000262158 CAMK2N1Q7Z7J9 78 aa8.65□□□□□ -1.03
SMAD7-201ENST00000262158 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
SMAD7-201ENST00000262158 LCE2CQ5TA81 110 aa8.45□□□□□ -1.06
SMAD7-201ENST00000262158 M0R2T5 61 aa8.39□□□□□ -1.07
SMAD7-201ENST00000262158 KRTAP19-1Q8IUB9 90 aa8.23□□□□□ -1.09
SMAD7-201ENST00000262158 MT1HP80294 61 aa8.23□□□□□ -1.09
SMAD7-201ENST00000262158 TNP1P09430 55 aa8.17□□□□□ -1.1
SMAD7-201ENST00000262158 MT1FP04733 61 aa8.16□□□□□ -1.1
SMAD7-201ENST00000262158 KRTAP10-10P60014 251 aa8.15□□□□□ -1.11
SMAD7-201ENST00000262158 MT2AP02795 61 aa8.09□□□□□ -1.11
SMAD7-201ENST00000262158 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
SMAD7-201ENST00000262158 PP632Q6XCG6 107 aa8.09□□□□□ -1.12
SMAD7-201ENST00000262158 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
SMAD7-201ENST00000262158 LCE3AQ5TA76 89 aa7.94□□□□□ -1.14
SMAD7-201ENST00000262158 USH2AO75445 5202 aa7.93□□□□□ -1.14
SMAD7-201ENST00000262158 MT1BP07438 61 aa7.81□□□□□ -1.16
SMAD7-201ENST00000262158 KMT2DO14686 5537 aa7.76□□□□□ -1.17
SMAD7-201ENST00000262158 KRTAP10-5P60370 271 aa7.75□□□□□ -1.17
SMAD7-201ENST00000262158 MT1XP80297 61 aa7.75□□□□□ -1.17
SMAD7-201ENST00000262158 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
SMAD7-201ENST00000262158 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
SMAD7-201ENST00000262158 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
SMAD7-201ENST00000262158 KRTAP9-3Q9BYQ3 159 aa7.65□□□□□ -1.18
SMAD7-201ENST00000262158 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
SMAD7-201ENST00000262158 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
SMAD7-201ENST00000262158 KRTAP8-1Q8IUC2 63 aa7.49□□□□□ -1.21
SMAD7-201ENST00000262158 LCE2BO14633 110 aa7.49□□□□□ -1.21
SMAD7-201ENST00000262158 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
SMAD7-201ENST00000262158 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
SMAD7-201ENST00000262158 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
SMAD7-201ENST00000262158 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
SMAD7-201ENST00000262158 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
SMAD7-201ENST00000262158 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
SMAD7-201ENST00000262158 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
SMAD7-201ENST00000262158 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
SMAD7-201ENST00000262158 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
SMAD7-201ENST00000262158 LCE3CQ5T5A8 94 aa6.98□□□□□ -1.29
SMAD7-201ENST00000262158 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
SMAD7-201ENST00000262158 INE1O15225 51 aa6.94□□□□□ -1.3
SMAD7-201ENST00000262158 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
SMAD7-201ENST00000262158 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
SMAD7-201ENST00000262158 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
SMAD7-201ENST00000262158 DSTQ03001 7570 aaKnown RBP6.7□□□□□ -1.34
SMAD7-201ENST00000262158 MT1EP04732 61 aa6.66□□□□□ -1.34
SMAD7-201ENST00000262158 MT1LQ93083 61 aa6.66□□□□□ -1.34
SMAD7-201ENST00000262158 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
SMAD7-201ENST00000262158 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms