RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
SCARB1-201ENST00000261693 K7ERS5 55 aa9.98□□□□□ -0.81
SCARB1-201ENST00000261693 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
SCARB1-201ENST00000261693 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
SCARB1-201ENST00000261693 KRTAP10-8P60410 259 aa9.93□□□□□ -0.82
SCARB1-201ENST00000261693 A0A0D9SG42 100 aa9.9□□□□□ -0.82
SCARB1-201ENST00000261693 RPL37P61927 97 aaKnown RBP9.9□□□□□ -0.82
SCARB1-201ENST00000261693 KRTAP13-4Q3LI77 160 aa9.9□□□□□ -0.82
SCARB1-201ENST00000261693 XP32Q5T750 250 aa9.87□□□□□ -0.83
SCARB1-201ENST00000261693 KRTAP21-3Q3LHN1 58 aa9.87□□□□□ -0.83
SCARB1-201ENST00000261693 Q5VSD8 79 aa9.85□□□□□ -0.83
SCARB1-201ENST00000261693 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
SCARB1-201ENST00000261693 S4R3F8 94 aa9.85□□□□□ -0.83
SCARB1-201ENST00000261693 ROMO1P60602 79 aa9.79□□□□□ -0.84
SCARB1-201ENST00000261693 P0C880 135 aa9.77□□□□□ -0.85
SCARB1-201ENST00000261693 LPAP08519 4548 aa9.73□□□□□ -0.85
SCARB1-201ENST00000261693 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
SCARB1-201ENST00000261693 RYR1P21817 5038 aa9.69□□□□□ -0.86
SCARB1-201ENST00000261693 H3BS24 57 aa9.65□□□□□ -0.86
SCARB1-201ENST00000261693 RYR3Q15413 4870 aa9.65□□□□□ -0.86
SCARB1-201ENST00000261693 LRP2P98164 4655 aa9.63□□□□□ -0.87
SCARB1-201ENST00000261693 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
SCARB1-201ENST00000261693 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
SCARB1-201ENST00000261693 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
SCARB1-201ENST00000261693 C10orf95Q9H7T3 257 aa9.58□□□□□ -0.88
SCARB1-201ENST00000261693 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
SCARB1-201ENST00000261693 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
SCARB1-201ENST00000261693 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
SCARB1-201ENST00000261693 ABCA13Q86UQ4 5058 aa9.42□□□□□ -0.9
SCARB1-201ENST00000261693 M0QZ58 72 aa9.34□□□□□ -0.91
SCARB1-201ENST00000261693 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
SCARB1-201ENST00000261693 R4GN34 69 aa9.18□□□□□ -0.94
SCARB1-201ENST00000261693 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
SCARB1-201ENST00000261693 KRTAP4-5Q9BYR2 181 aa9.15□□□□□ -0.95
SCARB1-201ENST00000261693 MUC17Q685J3 4493 aa9.1□□□□□ -0.95
SCARB1-201ENST00000261693 LORP23490 312 aaPredicted RBP9.09□□□□□ -0.95
SCARB1-201ENST00000261693 NDUFAF8A1L188 74 aa9.06□□□□□ -0.96
SCARB1-201ENST00000261693 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.96
SCARB1-201ENST00000261693 SEC61BP60468 96 aaKnown RBP9.02□□□□□ -0.97
SCARB1-201ENST00000261693 MUC2Q02817 5179 aa8.9□□□□□ -0.98
SCARB1-201ENST00000261693 J3QL48 77 aa8.83□□□□□ -1
SCARB1-201ENST00000261693 KRTAP19-2Q3LHN2 52 aa8.81□□□□□ -1
SCARB1-201ENST00000261693 HERC2O95714 4834 aa8.8□□□□□ -1
SCARB1-201ENST00000261693 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
SCARB1-201ENST00000261693 PLAC4Q8WY50 150 aa8.74□□□□□ -1.01
SCARB1-201ENST00000261693 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
SCARB1-201ENST00000261693 PCLOQ9Y6V0 5065 aa8.56□□□□□ -1.04
SCARB1-201ENST00000261693 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
SCARB1-201ENST00000261693 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
SCARB1-201ENST00000261693 HERC1Q15751 4861 aa8.46□□□□□ -1.06
SCARB1-201ENST00000261693 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
SCARB1-201ENST00000261693 TNP1P09430 55 aa8.37□□□□□ -1.07
SCARB1-201ENST00000261693 LUZP6Q538Z0 58 aa8.34□□□□□ -1.07
SCARB1-201ENST00000261693 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
SCARB1-201ENST00000261693 LCE2CQ5TA81 110 aa8.23□□□□□ -1.09
SCARB1-201ENST00000261693 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
SCARB1-201ENST00000261693 KRTAP23-1A1A580 65 aa8.16□□□□□ -1.1
SCARB1-201ENST00000261693 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.11
SCARB1-201ENST00000261693 M0R2T5 61 aa8.14□□□□□ -1.11
SCARB1-201ENST00000261693 SPRR2GQ9BYE4 73 aa8.14□□□□□ -1.11
SCARB1-201ENST00000261693 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
SCARB1-201ENST00000261693 SPRR5A0A1B0GTR4 108 aa8.02□□□□□ -1.12
SCARB1-201ENST00000261693 MT1HP80294 61 aa8□□□□□ -1.13
SCARB1-201ENST00000261693 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
SCARB1-201ENST00000261693 A0A0A0MQY5 61 aa7.97□□□□□ -1.13
SCARB1-201ENST00000261693 KRTAP10-10P60014 251 aa7.97□□□□□ -1.13
SCARB1-201ENST00000261693 MT1FP04733 61 aa7.96□□□□□ -1.14
SCARB1-201ENST00000261693 MT2AP02795 61 aa7.93□□□□□ -1.14
SCARB1-201ENST00000261693 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
SCARB1-201ENST00000261693 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
SCARB1-201ENST00000261693 KRTAP10-5P60370 271 aa7.7□□□□□ -1.18
SCARB1-201ENST00000261693 MT1BP07438 61 aa7.69□□□□□ -1.18
SCARB1-201ENST00000261693 MT1XP80297 61 aa7.68□□□□□ -1.18
SCARB1-201ENST00000261693 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
SCARB1-201ENST00000261693 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
SCARB1-201ENST00000261693 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
SCARB1-201ENST00000261693 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
SCARB1-201ENST00000261693 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
SCARB1-201ENST00000261693 USH2AO75445 5202 aa7.35□□□□□ -1.23
SCARB1-201ENST00000261693 KMT2DO14686 5537 aa7.32□□□□□ -1.24
SCARB1-201ENST00000261693 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
SCARB1-201ENST00000261693 KRTAP19-5Q3LI72 72 aa7.23□□□□□ -1.25
SCARB1-201ENST00000261693 LCE2BO14633 110 aa7.22□□□□□ -1.25
SCARB1-201ENST00000261693 INE1O15225 51 aa7.14□□□□□ -1.27
SCARB1-201ENST00000261693 LCE3CQ5T5A8 94 aa7.12□□□□□ -1.27
SCARB1-201ENST00000261693 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
SCARB1-201ENST00000261693 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
SCARB1-201ENST00000261693 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
SCARB1-201ENST00000261693 LCE2AQ5TA79 106 aaPredicted RBP6.89□□□□□ -1.31
SCARB1-201ENST00000261693 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
SCARB1-201ENST00000261693 KRTAP19-7Q3SYF9 63 aa6.84□□□□□ -1.31
SCARB1-201ENST00000261693 MT1LQ93083 61 aa6.65□□□□□ -1.34
SCARB1-201ENST00000261693 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
SCARB1-201ENST00000261693 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
SCARB1-201ENST00000261693 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
SCARB1-201ENST00000261693 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
SCARB1-201ENST00000261693 MT1EP04732 61 aa6.62□□□□□ -1.35
SCARB1-201ENST00000261693 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
SCARB1-201ENST00000261693 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
SCARB1-201ENST00000261693 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms