RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
TMEM260-201ENST00000261556 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
TMEM260-201ENST00000261556 STARD9Q9P2P6 4700 aa6.22□□□□□ -1.41
TMEM260-201ENST00000261556 LYSTQ99698 3801 aa6.17□□□□□ -1.42
TMEM260-201ENST00000261556 KMT2AQ03164 3969 aa6.09□□□□□ -1.44
TMEM260-201ENST00000261556 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
TMEM260-201ENST00000261556 VPS13DQ5THJ4 4388 aa6.05□□□□□ -1.44
TMEM260-201ENST00000261556 DNAH1Q9P2D7 4330 aa6.04□□□□□ -1.44
TMEM260-201ENST00000261556 MT1HL1P0DM35 61 aa6□□□□□ -1.45
TMEM260-201ENST00000261556 INE1O15225 51 aa5.98□□□□□ -1.45
TMEM260-201ENST00000261556 DNAH8Q96JB1 4490 aa5.96□□□□□ -1.45
TMEM260-201ENST00000261556 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
TMEM260-201ENST00000261556 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
TMEM260-201ENST00000261556 HYDINQ4G0P3 5121 aa5.93□□□□□ -1.46
TMEM260-201ENST00000261556 DNAH11Q96DT5 4516 aa5.92□□□□□ -1.46
TMEM260-201ENST00000261556 FRAS1Q86XX4 4008 aa5.91□□□□□ -1.46
TMEM260-201ENST00000261556 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
TMEM260-201ENST00000261556 DNAH2Q9P225 4427 aa5.9□□□□□ -1.46
TMEM260-201ENST00000261556 SACSQ9NZJ4 4579 aa5.88□□□□□ -1.47
TMEM260-201ENST00000261556 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
TMEM260-201ENST00000261556 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
TMEM260-201ENST00000261556 KRTAP10-4P60372 401 aaPredicted RBP5.85□□□□□ -1.47
TMEM260-201ENST00000261556 DNAH6Q9C0G6 4158 aa5.8□□□□□ -1.48
TMEM260-201ENST00000261556 RYR2Q92736 4967 aa5.79□□□□□ -1.48
TMEM260-201ENST00000261556 LRP1BQ9NZR2 4599 aa5.79□□□□□ -1.48
TMEM260-201ENST00000261556 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
TMEM260-201ENST00000261556 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
TMEM260-201ENST00000261556 FAT1Q14517 4588 aa5.76□□□□□ -1.49
TMEM260-201ENST00000261556 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
TMEM260-201ENST00000261556 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
TMEM260-201ENST00000261556 FAT2Q9NYQ8 4349 aa5.71□□□□□ -1.5
TMEM260-201ENST00000261556 RYR3Q15413 4870 aa5.69□□□□□ -1.5
TMEM260-201ENST00000261556 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
TMEM260-201ENST00000261556 PKD1P98161 4303 aa5.63□□□□□ -1.51
TMEM260-201ENST00000261556 VPS13BQ7Z7G8 4022 aa5.62□□□□□ -1.51
TMEM260-201ENST00000261556 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
TMEM260-201ENST00000261556 APOBP04114 4563 aaKnown RBP5.6□□□□□ -1.51
TMEM260-201ENST00000261556 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
TMEM260-201ENST00000261556 EPPK1P58107 5090 aaKnown RBP5.56□□□□□ -1.52
TMEM260-201ENST00000261556 RYR1P21817 5038 aa5.53□□□□□ -1.52
TMEM260-201ENST00000261556 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
TMEM260-201ENST00000261556 HSPG2P98160 4391 aa5.48□□□□□ -1.53
TMEM260-201ENST00000261556 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
TMEM260-201ENST00000261556 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
TMEM260-201ENST00000261556 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
TMEM260-201ENST00000261556 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
TMEM260-201ENST00000261556 HERC2O95714 4834 aa5.36□□□□□ -1.55
TMEM260-201ENST00000261556 KRTAP23-1A1A580 65 aa5.34□□□□□ -1.55
TMEM260-201ENST00000261556 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
TMEM260-201ENST00000261556 FAT3Q8TDW7 4589 aa5.32□□□□□ -1.56
TMEM260-201ENST00000261556 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
TMEM260-201ENST00000261556 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
TMEM260-201ENST00000261556 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
TMEM260-201ENST00000261556 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
TMEM260-201ENST00000261556 TNXBP22105 4242 aa5.15□□□□□ -1.58
TMEM260-201ENST00000261556 MT1HP80294 61 aa5.15□□□□□ -1.58
TMEM260-201ENST00000261556 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-201ENST00000261556 LRP2P98164 4655 aa5.11□□□□□ -1.59
TMEM260-201ENST00000261556 MT2AP02795 61 aa5.09□□□□□ -1.59
TMEM260-201ENST00000261556 LPAP08519 4548 aa5.09□□□□□ -1.59
TMEM260-201ENST00000261556 HERC1Q15751 4861 aa5.08□□□□□ -1.6
TMEM260-201ENST00000261556 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
TMEM260-201ENST00000261556 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
TMEM260-201ENST00000261556 MT1FP04733 61 aa5□□□□□ -1.61
TMEM260-201ENST00000261556 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
TMEM260-201ENST00000261556 KRTAP10-5P60370 271 aa4.86□□□□□ -1.63
TMEM260-201ENST00000261556 MUC2Q02817 5179 aa4.85□□□□□ -1.63
TMEM260-201ENST00000261556 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
TMEM260-201ENST00000261556 UBR4Q5T4S7 5183 aa4.83□□□□□ -1.64
TMEM260-201ENST00000261556 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
TMEM260-201ENST00000261556 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
TMEM260-201ENST00000261556 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
TMEM260-201ENST00000261556 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
TMEM260-201ENST00000261556 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
TMEM260-201ENST00000261556 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
TMEM260-201ENST00000261556 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
TMEM260-201ENST00000261556 FAT4Q6V0I7 4981 aa4.67□□□□□ -1.66
TMEM260-201ENST00000261556 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
TMEM260-201ENST00000261556 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-201ENST00000261556 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
TMEM260-201ENST00000261556 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
TMEM260-201ENST00000261556 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
TMEM260-201ENST00000261556 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
TMEM260-201ENST00000261556 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
TMEM260-201ENST00000261556 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
TMEM260-201ENST00000261556 MT1BP07438 61 aa4.56□□□□□ -1.68
TMEM260-201ENST00000261556 MT1XP80297 61 aa4.55□□□□□ -1.68
TMEM260-201ENST00000261556 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
TMEM260-201ENST00000261556 KRTAP9-3Q9BYQ3 159 aa4.48□□□□□ -1.69
TMEM260-201ENST00000261556 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
TMEM260-201ENST00000261556 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
TMEM260-201ENST00000261556 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
TMEM260-201ENST00000261556 SPRR2EP22531 72 aa4.42□□□□□ -1.7
TMEM260-201ENST00000261556 SPRR2BP35325 72 aa4.42□□□□□ -1.7
TMEM260-201ENST00000261556 SPRR2AP35326 72 aa4.42□□□□□ -1.7
TMEM260-201ENST00000261556 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
TMEM260-201ENST00000261556 LCE2BO14633 110 aa4.35□□□□□ -1.71
TMEM260-201ENST00000261556 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
TMEM260-201ENST00000261556 MT1GP13640 62 aa4.31□□□□□ -1.72
TMEM260-201ENST00000261556 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms