RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 DNAH1Q9P2D7 4330 aa7.47□□□□□ -1.21
SORT1-201ENST00000256637 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.21
SORT1-201ENST00000256637 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
SORT1-201ENST00000256637 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
SORT1-201ENST00000256637 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.22
SORT1-201ENST00000256637 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
SORT1-201ENST00000256637 ANK2Q01484 3957 aa7.36□□□□□ -1.23
SORT1-201ENST00000256637 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
SORT1-201ENST00000256637 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
SORT1-201ENST00000256637 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
SORT1-201ENST00000256637 LYSTQ99698 3801 aa7.27□□□□□ -1.25
SORT1-201ENST00000256637 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
SORT1-201ENST00000256637 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
SORT1-201ENST00000256637 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.25
SORT1-201ENST00000256637 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
SORT1-201ENST00000256637 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
SORT1-201ENST00000256637 MT1HP80294 61 aa7.16□□□□□ -1.26
SORT1-201ENST00000256637 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.26
SORT1-201ENST00000256637 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
SORT1-201ENST00000256637 PRKDCP78527 4128 aaKnown RBP7.12□□□□□ -1.27
SORT1-201ENST00000256637 SPRR2FQ96RM1 72 aa7.11□□□□□ -1.27
SORT1-201ENST00000256637 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
SORT1-201ENST00000256637 STARD9Q9P2P6 4700 aa7.03□□□□□ -1.28
SORT1-201ENST00000256637 DNAH11Q96DT5 4516 aa6.99□□□□□ -1.29
SORT1-201ENST00000256637 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
SORT1-201ENST00000256637 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
SORT1-201ENST00000256637 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
SORT1-201ENST00000256637 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
SORT1-201ENST00000256637 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
SORT1-201ENST00000256637 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
SORT1-201ENST00000256637 SPRR2EP22531 72 aa6.86□□□□□ -1.31
SORT1-201ENST00000256637 SPRR2BP35325 72 aa6.86□□□□□ -1.31
SORT1-201ENST00000256637 SPRR2AP35326 72 aa6.86□□□□□ -1.31
SORT1-201ENST00000256637 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
SORT1-201ENST00000256637 MT2AP02795 61 aa6.83□□□□□ -1.32
SORT1-201ENST00000256637 INE1O15225 51 aa6.78□□□□□ -1.32
SORT1-201ENST00000256637 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
SORT1-201ENST00000256637 MT1FP04733 61 aa6.77□□□□□ -1.33
SORT1-201ENST00000256637 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
SORT1-201ENST00000256637 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
SORT1-201ENST00000256637 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
SORT1-201ENST00000256637 SACSQ9NZJ4 4579 aa6.6□□□□□ -1.35
SORT1-201ENST00000256637 SPRR2DP22532 72 aa6.59□□□□□ -1.35
SORT1-201ENST00000256637 FAT1Q14517 4588 aa6.59□□□□□ -1.35
SORT1-201ENST00000256637 LPAP08519 4548 aa6.53□□□□□ -1.36
SORT1-201ENST00000256637 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
SORT1-201ENST00000256637 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
SORT1-201ENST00000256637 HSPG2P98160 4391 aa6.47□□□□□ -1.37
SORT1-201ENST00000256637 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
SORT1-201ENST00000256637 LCE2BO14633 110 aa6.38□□□□□ -1.39
SORT1-201ENST00000256637 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
SORT1-201ENST00000256637 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
SORT1-201ENST00000256637 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
SORT1-201ENST00000256637 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
SORT1-201ENST00000256637 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
SORT1-201ENST00000256637 PKD1P98161 4303 aa6.28□□□□□ -1.4
SORT1-201ENST00000256637 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
SORT1-201ENST00000256637 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
SORT1-201ENST00000256637 MT1GP13640 62 aa6.27□□□□□ -1.41
SORT1-201ENST00000256637 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
SORT1-201ENST00000256637 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
SORT1-201ENST00000256637 RYR1P21817 5038 aa6.21□□□□□ -1.42
SORT1-201ENST00000256637 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
SORT1-201ENST00000256637 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
SORT1-201ENST00000256637 TNXBP22105 4242 aa6.18□□□□□ -1.42
SORT1-201ENST00000256637 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.42
SORT1-201ENST00000256637 MT4P47944 62 aa6.1□□□□□ -1.43
SORT1-201ENST00000256637 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
SORT1-201ENST00000256637 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
SORT1-201ENST00000256637 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
SORT1-201ENST00000256637 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
SORT1-201ENST00000256637 MT1XP80297 61 aa5.99□□□□□ -1.45
SORT1-201ENST00000256637 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
SORT1-201ENST00000256637 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
SORT1-201ENST00000256637 RYR3Q15413 4870 aa5.96□□□□□ -1.46
SORT1-201ENST00000256637 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
SORT1-201ENST00000256637 MT1BP07438 61 aa5.88□□□□□ -1.47
SORT1-201ENST00000256637 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
SORT1-201ENST00000256637 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
SORT1-201ENST00000256637 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
SORT1-201ENST00000256637 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
SORT1-201ENST00000256637 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
SORT1-201ENST00000256637 LCE1BQ5T7P3 118 aa5.65□□□□□ -1.51
SORT1-201ENST00000256637 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
SORT1-201ENST00000256637 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
SORT1-201ENST00000256637 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
SORT1-201ENST00000256637 LRP2P98164 4655 aa5.58□□□□□ -1.52
SORT1-201ENST00000256637 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
SORT1-201ENST00000256637 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
SORT1-201ENST00000256637 LCE1DQ5T752 114 aa5.55□□□□□ -1.52
SORT1-201ENST00000256637 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
SORT1-201ENST00000256637 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
SORT1-201ENST00000256637 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
SORT1-201ENST00000256637 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
SORT1-201ENST00000256637 MT1LQ93083 61 aa5.39□□□□□ -1.55
SORT1-201ENST00000256637 MT1EP04732 61 aa5.38□□□□□ -1.55
SORT1-201ENST00000256637 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
SORT1-201ENST00000256637 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SORT1-201ENST00000256637 RYR2Q92736 4967 aa5.34□□□□□ -1.55
SORT1-201ENST00000256637 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms