RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 USMG5Q96IX5 58 aa1.03□□□□□ -2.24
HMGB1P5-201ENST00000255320 ANK2Q01484 3957 aa1.03□□□□□ -2.25
HMGB1P5-201ENST00000255320 NBASA2RRP1 2371 aa1.03□□□□□ -2.25
HMGB1P5-201ENST00000255320 DEFB130BP0DP73 79 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 DEFB130AP0DP74 79 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 CLPSL2Q6UWE3 100 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 WFDC10BQ8IUB3 73 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 UBE2DNLQ8IWF7 75 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 KAAG1Q9UBP8 84 aa1.02□□□□□ -2.25
HMGB1P5-201ENST00000255320 PRKDCP78527 4128 aaKnown RBP1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 DEFB109BQ30KR1 87 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 RPL39P5Q59GN2 51 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 APC2O95996 2303 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 KNL1Q8NG31 2342 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 URB1O60287 2271 aaKnown RBP1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 TACC2O95359 2948 aa1.01□□□□□ -2.25
HMGB1P5-201ENST00000255320 FAT4Q6V0I7 4981 aa1□□□□□ -2.25
HMGB1P5-201ENST00000255320 LELP1Q5T871 98 aa1□□□□□ -2.25
HMGB1P5-201ENST00000255320 COL7A1Q02388 2944 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 A8MTW9 85 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 SPRR1AP35321 89 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 SMR3AQ99954 134 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 GPR98Q8WXG9 6306 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 ACACAQ13085 2346 aa0.99□□□□□ -2.25
HMGB1P5-201ENST00000255320 RNF213Q63HN8 5207 aa0.98□□□□□ -2.25
HMGB1P5-201ENST00000255320 Q5VSD8 79 aa0.98□□□□□ -2.25
HMGB1P5-201ENST00000255320 ASCC3Q8N3C0 2202 aaKnown RBP0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 CNTRLQ7Z7A1 2325 aa0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 STAB2Q8WWQ8 2551 aa0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 H3BUA1 57 aa0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 SPRR1BP22528 89 aa0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 DEFB124Q8NES8 71 aa0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 SONP18583 2426 aaKnown RBP0.97□□□□□ -2.25
HMGB1P5-201ENST00000255320 DEFB108AA8MXU0 73 aa0.96□□□□□ -2.26
HMGB1P5-201ENST00000255320 DYNC2H1Q8NCM8 4307 aaKnown RBP0.95□□□□□ -2.26
HMGB1P5-201ENST00000255320 COX14Q96I36 57 aa0.95□□□□□ -2.26
HMGB1P5-201ENST00000255320 TOMM7Q9P0U1 55 aa0.95□□□□□ -2.26
HMGB1P5-201ENST00000255320 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P5-201ENST00000255320 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P5-201ENST00000255320 SACSQ9NZJ4 4579 aa0.94□□□□□ -2.26
HMGB1P5-201ENST00000255320 TRRAPQ9Y4A5 3859 aa0.94□□□□□ -2.26
HMGB1P5-201ENST00000255320 WNK2Q9Y3S1 2297 aa0.94□□□□□ -2.26
HMGB1P5-201ENST00000255320 DEFB104AQ8WTQ1 72 aa0.94□□□□□ -2.26
HMGB1P5-201ENST00000255320 S4R3F8 94 aa0.94□□□□□ -2.26
HMGB1P5-201ENST00000255320 NEBP20929 6669 aa0.93□□□□□ -2.26
HMGB1P5-201ENST00000255320 HECTD4Q9Y4D8 3996 aa0.93□□□□□ -2.26
HMGB1P5-201ENST00000255320 SRRM2Q9UQ35 2752 aaKnown RBP0.93□□□□□ -2.26
HMGB1P5-201ENST00000255320 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
HMGB1P5-201ENST00000255320 KRTAP20-1Q3LI63 56 aa0.92□□□□□ -2.26
HMGB1P5-201ENST00000255320 H0YGG7 62 aa0.91□□□□□ -2.26
HMGB1P5-201ENST00000255320 DNAH1Q9P2D7 4330 aa0.91□□□□□ -2.26
HMGB1P5-201ENST00000255320 CSMD3Q7Z407 3707 aa0.91□□□□□ -2.26
HMGB1P5-201ENST00000255320 KMT2AQ03164 3969 aa0.9□□□□□ -2.26
HMGB1P5-201ENST00000255320 PKDREJQ9NTG1 2253 aa0.9□□□□□ -2.26
HMGB1P5-201ENST00000255320 DEFB105AQ8NG35 78 aa0.9□□□□□ -2.27
HMGB1P5-201ENST00000255320 SYNE2Q8WXH0 6885 aaKnown RBP0.9□□□□□ -2.27
HMGB1P5-201ENST00000255320 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
HMGB1P5-201ENST00000255320 CMYA5Q8N3K9 4069 aa0.89□□□□□ -2.27
HMGB1P5-201ENST00000255320 PRO0255Q9UI72 69 aa0.89□□□□□ -2.27
HMGB1P5-201ENST00000255320 APLNQ9ULZ1 77 aa0.89□□□□□ -2.27
HMGB1P5-201ENST00000255320 SSPOA2VEC9 5147 aa0.88□□□□□ -2.27
HMGB1P5-201ENST00000255320 AKAP6Q13023 2319 aa0.88□□□□□ -2.27
HMGB1P5-201ENST00000255320 HMCN2Q8NDA2 5059 aa0.88□□□□□ -2.27
HMGB1P5-201ENST00000255320 STATHP02808 62 aa0.88□□□□□ -2.27
HMGB1P5-201ENST00000255320 MYCBP2O75592 4640 aa0.87□□□□□ -2.27
HMGB1P5-201ENST00000255320 H3BUX3 64 aa0.87□□□□□ -2.27
HMGB1P5-201ENST00000255320 PRLHP81277 87 aa0.87□□□□□ -2.27
HMGB1P5-201ENST00000255320 NOP10Q9NPE3 64 aaKnown RBP0.87□□□□□ -2.27
HMGB1P5-201ENST00000255320 LYSTQ99698 3801 aa0.86□□□□□ -2.27
HMGB1P5-201ENST00000255320 DNAH11Q96DT5 4516 aa0.86□□□□□ -2.27
HMGB1P5-201ENST00000255320 PKHD1P08F94 4074 aa0.85□□□□□ -2.27
HMGB1P5-201ENST00000255320 VPS13DQ5THJ4 4388 aa0.85□□□□□ -2.27
HMGB1P5-201ENST00000255320 HSPG2P98160 4391 aa0.85□□□□□ -2.27
HMGB1P5-201ENST00000255320 DEFB1P60022 68 aa0.85□□□□□ -2.27
HMGB1P5-201ENST00000255320 ANK3Q12955 4377 aaKnown RBP0.84□□□□□ -2.27
HMGB1P5-201ENST00000255320 M0QZ58 72 aa0.84□□□□□ -2.27
HMGB1P5-201ENST00000255320 APELAP0DMC3 54 aa0.84□□□□□ -2.27
HMGB1P5-201ENST00000255320 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
HMGB1P5-201ENST00000255320 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
HMGB1P5-201ENST00000255320 DNAH9Q9NYC9 4486 aa0.83□□□□□ -2.28
HMGB1P5-201ENST00000255320 DNAH8Q96JB1 4490 aa0.82□□□□□ -2.28
HMGB1P5-201ENST00000255320 A0A0D9SG42 100 aa0.82□□□□□ -2.28
HMGB1P5-201ENST00000255320 SPINK1P00995 79 aa0.82□□□□□ -2.28
HMGB1P5-201ENST00000255320 DYNC1H1Q14204 4646 aaKnown RBP0.82□□□□□ -2.28
HMGB1P5-201ENST00000255320 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
HMGB1P5-201ENST00000255320 FAT3Q8TDW7 4589 aa0.81□□□□□ -2.28
HMGB1P5-201ENST00000255320 FAT2Q9NYQ8 4349 aa0.8□□□□□ -2.28
HMGB1P5-201ENST00000255320 DNAH7Q8WXX0 4024 aa0.8□□□□□ -2.28
HMGB1P5-201ENST00000255320 LRP2P98164 4655 aa0.8□□□□□ -2.28
HMGB1P5-201ENST00000255320 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
HMGB1P5-201ENST00000255320 KMT2DO14686 5537 aa0.8□□□□□ -2.28
HMGB1P5-201ENST00000255320 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
HMGB1P5-201ENST00000255320 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
HMGB1P5-201ENST00000255320 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
HMGB1P5-201ENST00000255320 HUWE1Q7Z6Z7 4374 aaKnown RBP0.78□□□□□ -2.28
HMGB1P5-201ENST00000255320 PKD1P98161 4303 aa0.78□□□□□ -2.29
HMGB1P5-201ENST00000255320 FAT1Q14517 4588 aa0.77□□□□□ -2.29
HMGB1P5-201ENST00000255320 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
HMGB1P5-201ENST00000255320 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms