RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 K7ERS5 55 aa10.42□□□□□ -0.74
CACTIN-202ENST00000248420 KRTAP13-4Q3LI77 160 aa10.41□□□□□ -0.74
CACTIN-202ENST00000248420 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
CACTIN-202ENST00000248420 TNXBP22105 4242 aa10.37□□□□□ -0.75
CACTIN-202ENST00000248420 KRTAP10-6P60371 365 aaPredicted RBP10.37□□□□□ -0.75
CACTIN-202ENST00000248420 ROMO1P60602 79 aa10.36□□□□□ -0.75
CACTIN-202ENST00000248420 A0A1B0GVY2 172 aa10.36□□□□□ -0.75
CACTIN-202ENST00000248420 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
CACTIN-202ENST00000248420 KRTAP10-8P60410 259 aa10.34□□□□□ -0.75
CACTIN-202ENST00000248420 LPAP08519 4548 aa10.28□□□□□ -0.76
CACTIN-202ENST00000248420 RPL37P61927 97 aaKnown RBP10.28□□□□□ -0.76
CACTIN-202ENST00000248420 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
CACTIN-202ENST00000248420 RYR2Q92736 4967 aa10.26□□□□□ -0.77
CACTIN-202ENST00000248420 P0C880 135 aa10.23□□□□□ -0.77
CACTIN-202ENST00000248420 C10orf95Q9H7T3 257 aa10.2□□□□□ -0.78
CACTIN-202ENST00000248420 S4R3F8 94 aa10.2□□□□□ -0.78
CACTIN-202ENST00000248420 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
CACTIN-202ENST00000248420 XP32Q5T750 250 aa10.16□□□□□ -0.78
CACTIN-202ENST00000248420 KRTAP12-2P59991 146 aa10.07□□□□□ -0.8
CACTIN-202ENST00000248420 LRP2P98164 4655 aa10.06□□□□□ -0.8
CACTIN-202ENST00000248420 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
CACTIN-202ENST00000248420 Q5VSD8 79 aa10.04□□□□□ -0.8
CACTIN-202ENST00000248420 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
CACTIN-202ENST00000248420 KIAA1109Q2LD37 5005 aa9.93□□□□□ -0.82
CACTIN-202ENST00000248420 RYR3Q15413 4870 aa9.91□□□□□ -0.82
CACTIN-202ENST00000248420 KRTAP12-1P59990 96 aa9.9□□□□□ -0.82
CACTIN-202ENST00000248420 RYR1P21817 5038 aa9.9□□□□□ -0.82
CACTIN-202ENST00000248420 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
CACTIN-202ENST00000248420 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
CACTIN-202ENST00000248420 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
CACTIN-202ENST00000248420 KRTAP15-1Q3LI76 137 aa9.71□□□□□ -0.85
CACTIN-202ENST00000248420 M0QZ58 72 aa9.65□□□□□ -0.87
CACTIN-202ENST00000248420 EPPK1P58107 5090 aaKnown RBP9.58□□□□□ -0.88
CACTIN-202ENST00000248420 R4GN34 69 aa9.54□□□□□ -0.88
CACTIN-202ENST00000248420 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
CACTIN-202ENST00000248420 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
CACTIN-202ENST00000248420 MUC2Q02817 5179 aa9.4□□□□□ -0.9
CACTIN-202ENST00000248420 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
CACTIN-202ENST00000248420 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
CACTIN-202ENST00000248420 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
CACTIN-202ENST00000248420 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
CACTIN-202ENST00000248420 CAMK2N1Q7Z7J9 78 aa9.12□□□□□ -0.95
CACTIN-202ENST00000248420 HERC2O95714 4834 aa9.04□□□□□ -0.96
CACTIN-202ENST00000248420 KRTAP19-2Q3LHN2 52 aa9.03□□□□□ -0.96
CACTIN-202ENST00000248420 J3QL48 77 aa8.97□□□□□ -0.97
CACTIN-202ENST00000248420 PCLOQ9Y6V0 5065 aa8.96□□□□□ -0.97
CACTIN-202ENST00000248420 A0A0A0MQY5 61 aa8.96□□□□□ -0.98
CACTIN-202ENST00000248420 FLGP20930 4061 aaPredicted RBP8.9□□□□□ -0.98
CACTIN-202ENST00000248420 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
CACTIN-202ENST00000248420 PP632Q6XCG6 107 aa8.84□□□□□ -0.99
CACTIN-202ENST00000248420 LUZP6Q538Z0 58 aa8.81□□□□□ -1
CACTIN-202ENST00000248420 HERC1Q15751 4861 aa8.77□□□□□ -1
CACTIN-202ENST00000248420 BIRC6Q9NR09 4857 aa8.71□□□□□ -1.02
CACTIN-202ENST00000248420 TNP1P09430 55 aa8.7□□□□□ -1.02
CACTIN-202ENST00000248420 RNF213Q63HN8 5207 aa8.54□□□□□ -1.04
CACTIN-202ENST00000248420 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
CACTIN-202ENST00000248420 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
CACTIN-202ENST00000248420 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
CACTIN-202ENST00000248420 SPRR5A0A1B0GTR4 108 aa8.38□□□□□ -1.07
CACTIN-202ENST00000248420 M0R2T5 61 aa8.37□□□□□ -1.07
CACTIN-202ENST00000248420 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
CACTIN-202ENST00000248420 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
CACTIN-202ENST00000248420 SPRR2GQ9BYE4 73 aa8.33□□□□□ -1.08
CACTIN-202ENST00000248420 LCE3AQ5TA76 89 aa8.33□□□□□ -1.08
CACTIN-202ENST00000248420 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
CACTIN-202ENST00000248420 MT1FP04733 61 aa8.17□□□□□ -1.1
CACTIN-202ENST00000248420 MT1HP80294 61 aa8.17□□□□□ -1.1
CACTIN-202ENST00000248420 MT2AP02795 61 aa8.11□□□□□ -1.11
CACTIN-202ENST00000248420 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
CACTIN-202ENST00000248420 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
CACTIN-202ENST00000248420 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
CACTIN-202ENST00000248420 MT1XP80297 61 aa7.92□□□□□ -1.14
CACTIN-202ENST00000248420 MT1BP07438 61 aa7.91□□□□□ -1.14
CACTIN-202ENST00000248420 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
CACTIN-202ENST00000248420 KRTAP12-3P60328 96 aa7.85□□□□□ -1.15
CACTIN-202ENST00000248420 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
CACTIN-202ENST00000248420 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
CACTIN-202ENST00000248420 KMT2DO14686 5537 aa7.8□□□□□ -1.16
CACTIN-202ENST00000248420 USH2AO75445 5202 aa7.79□□□□□ -1.16
CACTIN-202ENST00000248420 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
CACTIN-202ENST00000248420 PRO2289Q9P1D8 64 aa7.63□□□□□ -1.19
CACTIN-202ENST00000248420 KRTAP19-5Q3LI72 72 aa7.51□□□□□ -1.21
CACTIN-202ENST00000248420 INE1O15225 51 aa7.5□□□□□ -1.21
CACTIN-202ENST00000248420 KRTAP4-8A0A0G2JLE6 195 aa7.39□□□□□ -1.23
CACTIN-202ENST00000248420 LCE2BO14633 110 aa7.39□□□□□ -1.23
CACTIN-202ENST00000248420 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
CACTIN-202ENST00000248420 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
CACTIN-202ENST00000248420 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
CACTIN-202ENST00000248420 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
CACTIN-202ENST00000248420 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
CACTIN-202ENST00000248420 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
CACTIN-202ENST00000248420 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
CACTIN-202ENST00000248420 KRTAP2-3P0C7H8 128 aa6.91□□□□□ -1.3
CACTIN-202ENST00000248420 KRTAP2-4Q9BYR9 128 aa6.91□□□□□ -1.3
CACTIN-202ENST00000248420 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
CACTIN-202ENST00000248420 MT1LQ93083 61 aa6.85□□□□□ -1.31
CACTIN-202ENST00000248420 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
CACTIN-202ENST00000248420 MT1EP04732 61 aa6.8□□□□□ -1.32
CACTIN-202ENST00000248420 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
CACTIN-202ENST00000248420 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms