RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 DNAH1Q9P2D7 4330 aa2.99□□□□□ -1.93
CSMD2-201ENST00000241312 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
CSMD2-201ENST00000241312 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
CSMD2-201ENST00000241312 RYR1P21817 5038 aa2.95□□□□□ -1.94
CSMD2-201ENST00000241312 MT1HL1P0DM35 61 aa2.93□□□□□ -1.94
CSMD2-201ENST00000241312 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
CSMD2-201ENST00000241312 HECTD4Q9Y4D8 3996 aa2.91□□□□□ -1.94
CSMD2-201ENST00000241312 DNAH7Q8WXX0 4024 aa2.91□□□□□ -1.94
CSMD2-201ENST00000241312 DNAH2Q9P225 4427 aa2.9□□□□□ -1.95
CSMD2-201ENST00000241312 HUWE1Q7Z6Z7 4374 aaKnown RBP2.9□□□□□ -1.95
CSMD2-201ENST00000241312 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
CSMD2-201ENST00000241312 KMT2AQ03164 3969 aa2.86□□□□□ -1.95
CSMD2-201ENST00000241312 FRAS1Q86XX4 4008 aa2.85□□□□□ -1.95
CSMD2-201ENST00000241312 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
CSMD2-201ENST00000241312 KRTAP4-5Q9BYR2 181 aa2.84□□□□□ -1.95
CSMD2-201ENST00000241312 LORP23490 312 aaPredicted RBP2.84□□□□□ -1.96
CSMD2-201ENST00000241312 KRTAP10-4P60372 401 aaPredicted RBP2.83□□□□□ -1.96
CSMD2-201ENST00000241312 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
CSMD2-201ENST00000241312 DNAH10Q8IVF4 4471 aa2.79□□□□□ -1.96
CSMD2-201ENST00000241312 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
CSMD2-201ENST00000241312 KRTAP8-1Q8IUC2 63 aa2.78□□□□□ -1.96
CSMD2-201ENST00000241312 DNAH6Q9C0G6 4158 aa2.75□□□□□ -1.97
CSMD2-201ENST00000241312 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
CSMD2-201ENST00000241312 DNAH11Q96DT5 4516 aa2.7□□□□□ -1.98
CSMD2-201ENST00000241312 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
CSMD2-201ENST00000241312 DNAH9Q9NYC9 4486 aa2.67□□□□□ -1.98
CSMD2-201ENST00000241312 VPS13DQ5THJ4 4388 aa2.64□□□□□ -1.99
CSMD2-201ENST00000241312 SPRR2GQ9BYE4 73 aa2.63□□□□□ -1.99
CSMD2-201ENST00000241312 PLECQ15149 4684 aaKnown RBP2.62□□□□□ -1.99
CSMD2-201ENST00000241312 KRTAP4-1Q9BYQ7 146 aa2.62□□□□□ -1.99
CSMD2-201ENST00000241312 PRKDCP78527 4128 aaKnown RBP2.61□□□□□ -1.99
CSMD2-201ENST00000241312 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
CSMD2-201ENST00000241312 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
CSMD2-201ENST00000241312 DNAH17Q9UFH2 4485 aa2.6□□□□□ -1.99
CSMD2-201ENST00000241312 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
CSMD2-201ENST00000241312 FAT2Q9NYQ8 4349 aa2.59□□□□□ -2
CSMD2-201ENST00000241312 DNAH8Q96JB1 4490 aa2.59□□□□□ -2
CSMD2-201ENST00000241312 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
CSMD2-201ENST00000241312 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
CSMD2-201ENST00000241312 MT1HP80294 61 aa2.56□□□□□ -2
CSMD2-201ENST00000241312 MT2AP02795 61 aa2.55□□□□□ -2
CSMD2-201ENST00000241312 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
CSMD2-201ENST00000241312 DNHD1Q96M86 4753 aa2.54□□□□□ -2
CSMD2-201ENST00000241312 STARD9Q9P2P6 4700 aa2.54□□□□□ -2
CSMD2-201ENST00000241312 RYR3Q15413 4870 aa2.54□□□□□ -2
CSMD2-201ENST00000241312 HYDINQ4G0P3 5121 aa2.53□□□□□ -2
CSMD2-201ENST00000241312 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
CSMD2-201ENST00000241312 MT1FP04733 61 aa2.49□□□□□ -2.01
CSMD2-201ENST00000241312 FAT1Q14517 4588 aa2.49□□□□□ -2.01
CSMD2-201ENST00000241312 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
CSMD2-201ENST00000241312 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
CSMD2-201ENST00000241312 LRP1Q07954 4544 aaKnown RBP2.47□□□□□ -2.01
CSMD2-201ENST00000241312 APOBP04114 4563 aaKnown RBP2.45□□□□□ -2.02
CSMD2-201ENST00000241312 RYR2Q92736 4967 aa2.45□□□□□ -2.02
CSMD2-201ENST00000241312 LRP1BQ9NZR2 4599 aa2.44□□□□□ -2.02
CSMD2-201ENST00000241312 SACSQ9NZJ4 4579 aa2.43□□□□□ -2.02
CSMD2-201ENST00000241312 LCE3BQ5TA77 95 aa2.42□□□□□ -2.02
CSMD2-201ENST00000241312 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
CSMD2-201ENST00000241312 PKD1P98161 4303 aa2.42□□□□□ -2.02
CSMD2-201ENST00000241312 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
CSMD2-201ENST00000241312 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
CSMD2-201ENST00000241312 KRTAP19-8Q3LI54 63 aa2.38□□□□□ -2.03
CSMD2-201ENST00000241312 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
CSMD2-201ENST00000241312 FAT3Q8TDW7 4589 aa2.36□□□□□ -2.03
CSMD2-201ENST00000241312 HSPG2P98160 4391 aa2.35□□□□□ -2.03
CSMD2-201ENST00000241312 MT1XP80297 61 aa2.35□□□□□ -2.03
CSMD2-201ENST00000241312 MT1GP13640 62 aa2.34□□□□□ -2.03
CSMD2-201ENST00000241312 SPRR2EP22531 72 aa2.34□□□□□ -2.03
CSMD2-201ENST00000241312 SPRR2BP35325 72 aa2.34□□□□□ -2.03
CSMD2-201ENST00000241312 SPRR2AP35326 72 aa2.34□□□□□ -2.03
CSMD2-201ENST00000241312 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
CSMD2-201ENST00000241312 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
CSMD2-201ENST00000241312 KRTAP19-1Q8IUB9 90 aa2.33□□□□□ -2.04
CSMD2-201ENST00000241312 LCE2BO14633 110 aa2.3□□□□□ -2.04
CSMD2-201ENST00000241312 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
CSMD2-201ENST00000241312 HERC2O95714 4834 aa2.29□□□□□ -2.04
CSMD2-201ENST00000241312 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CSMD2-201ENST00000241312 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
CSMD2-201ENST00000241312 KRTAP17-1Q9BYP8 105 aa2.28□□□□□ -2.05
CSMD2-201ENST00000241312 HERC1Q15751 4861 aa2.27□□□□□ -2.05
CSMD2-201ENST00000241312 KRTAP4-8A0A0G2JLE6 195 aa2.27□□□□□ -2.05
CSMD2-201ENST00000241312 KRTAP4-8Q9BYQ9 185 aa2.27□□□□□ -2.05
CSMD2-201ENST00000241312 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
CSMD2-201ENST00000241312 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
CSMD2-201ENST00000241312 MT3P25713 68 aa2.26□□□□□ -2.05
CSMD2-201ENST00000241312 MT1BP07438 61 aa2.23□□□□□ -2.05
CSMD2-201ENST00000241312 UBR4Q5T4S7 5183 aa2.23□□□□□ -2.05
CSMD2-201ENST00000241312 TNXBP22105 4242 aa2.22□□□□□ -2.05
CSMD2-201ENST00000241312 KRTAP4-7Q9BYR0 210 aa2.21□□□□□ -2.06
CSMD2-201ENST00000241312 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
CSMD2-201ENST00000241312 KRTAP9-8Q9BYQ0 159 aa2.18□□□□□ -2.06
CSMD2-201ENST00000241312 KRTAP9-3Q9BYQ3 159 aa2.17□□□□□ -2.06
CSMD2-201ENST00000241312 MT1LQ93083 61 aa2.17□□□□□ -2.06
CSMD2-201ENST00000241312 LRP2P98164 4655 aa2.15□□□□□ -2.06
CSMD2-201ENST00000241312 LPAP08519 4548 aa2.15□□□□□ -2.07
CSMD2-201ENST00000241312 LCE2CQ5TA81 110 aa2.13□□□□□ -2.07
CSMD2-201ENST00000241312 KMT2CQ8NEZ4 4911 aaKnown RBP2.13□□□□□ -2.07
CSMD2-201ENST00000241312 LOC100996750A0A140TA64 210 aa2.12□□□□□ -2.07
CSMD2-201ENST00000241312 MT1EP04732 61 aa2.12□□□□□ -2.07
CSMD2-201ENST00000241312 PRM1P04553 51 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms