RNA–Protein interactions for RNA: ENST00000238855.11

AFTPH-201, Transcript of aftiphilin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene AFTPH, Length 4,113 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-201ENST00000238855 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
AFTPH-201ENST00000238855 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
AFTPH-201ENST00000238855 M0QZ58 72 aa8.35□□□□□ -1.07
AFTPH-201ENST00000238855 R4GN34 69 aa8.35□□□□□ -1.07
AFTPH-201ENST00000238855 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
AFTPH-201ENST00000238855 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
AFTPH-201ENST00000238855 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
AFTPH-201ENST00000238855 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
AFTPH-201ENST00000238855 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.09
AFTPH-201ENST00000238855 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.09
AFTPH-201ENST00000238855 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
AFTPH-201ENST00000238855 KMT2CQ8NEZ4 4911 aaKnown RBP8.17□□□□□ -1.1
AFTPH-201ENST00000238855 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
AFTPH-201ENST00000238855 XP32Q5T750 250 aa8.16□□□□□ -1.1
AFTPH-201ENST00000238855 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
AFTPH-201ENST00000238855 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
AFTPH-201ENST00000238855 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
AFTPH-201ENST00000238855 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
AFTPH-201ENST00000238855 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
AFTPH-201ENST00000238855 APOBP04114 4563 aaKnown RBP8.09□□□□□ -1.11
AFTPH-201ENST00000238855 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
AFTPH-201ENST00000238855 PKD1P98161 4303 aa8.06□□□□□ -1.12
AFTPH-201ENST00000238855 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
AFTPH-201ENST00000238855 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
AFTPH-201ENST00000238855 RYR2Q92736 4967 aa8□□□□□ -1.13
AFTPH-201ENST00000238855 RYR3Q15413 4870 aa7.98□□□□□ -1.13
AFTPH-201ENST00000238855 RYR1P21817 5038 aa7.95□□□□□ -1.14
AFTPH-201ENST00000238855 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
AFTPH-201ENST00000238855 KRTAP4-5Q9BYR2 181 aa7.93□□□□□ -1.14
AFTPH-201ENST00000238855 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
AFTPH-201ENST00000238855 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
AFTPH-201ENST00000238855 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
AFTPH-201ENST00000238855 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
AFTPH-201ENST00000238855 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
AFTPH-201ENST00000238855 HSPG2P98160 4391 aa7.72□□□□□ -1.17
AFTPH-201ENST00000238855 M0R2T5 61 aa7.65□□□□□ -1.18
AFTPH-201ENST00000238855 EPPK1P58107 5090 aaKnown RBP7.63□□□□□ -1.19
AFTPH-201ENST00000238855 LRP2P98164 4655 aa7.62□□□□□ -1.19
AFTPH-201ENST00000238855 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
AFTPH-201ENST00000238855 TNP1P09430 55 aa7.6□□□□□ -1.19
AFTPH-201ENST00000238855 PKHD1L1Q86WI1 4243 aa7.57□□□□□ -1.2
AFTPH-201ENST00000238855 LPAP08519 4548 aa7.49□□□□□ -1.21
AFTPH-201ENST00000238855 HERC2O95714 4834 aa7.46□□□□□ -1.21
AFTPH-201ENST00000238855 TNXBP22105 4242 aa7.46□□□□□ -1.22
AFTPH-201ENST00000238855 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
AFTPH-201ENST00000238855 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
AFTPH-201ENST00000238855 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
AFTPH-201ENST00000238855 MUC2Q02817 5179 aa7.2□□□□□ -1.26
AFTPH-201ENST00000238855 HERC1Q15751 4861 aa7.09□□□□□ -1.27
AFTPH-201ENST00000238855 KRTAP10-10P60014 251 aa7.09□□□□□ -1.27
AFTPH-201ENST00000238855 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
AFTPH-201ENST00000238855 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
AFTPH-201ENST00000238855 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
AFTPH-201ENST00000238855 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.31
AFTPH-201ENST00000238855 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
AFTPH-201ENST00000238855 UBR4Q5T4S7 5183 aa6.78□□□□□ -1.32
AFTPH-201ENST00000238855 LCE3AQ5TA76 89 aa6.77□□□□□ -1.33
AFTPH-201ENST00000238855 INE1O15225 51 aa6.75□□□□□ -1.33
AFTPH-201ENST00000238855 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
AFTPH-201ENST00000238855 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
AFTPH-201ENST00000238855 MT1HP80294 61 aa6.7□□□□□ -1.34
AFTPH-201ENST00000238855 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
AFTPH-201ENST00000238855 FLGP20930 4061 aaPredicted RBP6.61□□□□□ -1.35
AFTPH-201ENST00000238855 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
AFTPH-201ENST00000238855 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
AFTPH-201ENST00000238855 MT1FP04733 61 aa6.57□□□□□ -1.36
AFTPH-201ENST00000238855 MT2AP02795 61 aa6.57□□□□□ -1.36
AFTPH-201ENST00000238855 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
AFTPH-201ENST00000238855 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
AFTPH-201ENST00000238855 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
AFTPH-201ENST00000238855 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
AFTPH-201ENST00000238855 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
AFTPH-201ENST00000238855 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
AFTPH-201ENST00000238855 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
AFTPH-201ENST00000238855 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
AFTPH-201ENST00000238855 MT1BP07438 61 aa6.17□□□□□ -1.42
AFTPH-201ENST00000238855 USH2AO75445 5202 aa6.13□□□□□ -1.43
AFTPH-201ENST00000238855 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
AFTPH-201ENST00000238855 MT1XP80297 61 aa6.11□□□□□ -1.43
AFTPH-201ENST00000238855 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
AFTPH-201ENST00000238855 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
AFTPH-201ENST00000238855 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.44
AFTPH-201ENST00000238855 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
AFTPH-201ENST00000238855 LCE2BO14633 110 aa5.98□□□□□ -1.45
AFTPH-201ENST00000238855 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
AFTPH-201ENST00000238855 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
AFTPH-201ENST00000238855 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
AFTPH-201ENST00000238855 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
AFTPH-201ENST00000238855 OBSCNQ5VST9 7968 aa5.88□□□□□ -1.47
AFTPH-201ENST00000238855 KMT2DO14686 5537 aa5.88□□□□□ -1.47
AFTPH-201ENST00000238855 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
AFTPH-201ENST00000238855 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
AFTPH-201ENST00000238855 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
AFTPH-201ENST00000238855 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
AFTPH-201ENST00000238855 DSTQ03001 7570 aaKnown RBP5.48□□□□□ -1.53
AFTPH-201ENST00000238855 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
AFTPH-201ENST00000238855 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
AFTPH-201ENST00000238855 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
AFTPH-201ENST00000238855 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
AFTPH-201ENST00000238855 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms