RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
YIPF4-201ENST00000238831 OTOGQ6ZRI0 2925 aa3.61□□□□□ -1.83
YIPF4-201ENST00000238831 HUWE1Q7Z6Z7 4374 aaKnown RBP3.59□□□□□ -1.83
YIPF4-201ENST00000238831 ANK3Q12955 4377 aaKnown RBP3.59□□□□□ -1.83
YIPF4-201ENST00000238831 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
YIPF4-201ENST00000238831 DNAH3Q8TD57 4116 aa3.53□□□□□ -1.84
YIPF4-201ENST00000238831 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
YIPF4-201ENST00000238831 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
YIPF4-201ENST00000238831 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
YIPF4-201ENST00000238831 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
YIPF4-201ENST00000238831 DYNC1H1Q14204 4646 aaKnown RBP3.48□□□□□ -1.85
YIPF4-201ENST00000238831 DNAH11Q96DT5 4516 aa3.48□□□□□ -1.85
YIPF4-201ENST00000238831 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
YIPF4-201ENST00000238831 BSNQ9UPA5 3926 aa3.46□□□□□ -1.86
YIPF4-201ENST00000238831 DNAH6Q9C0G6 4158 aa3.43□□□□□ -1.86
YIPF4-201ENST00000238831 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
YIPF4-201ENST00000238831 MYCBP2O75592 4640 aa3.4□□□□□ -1.86
YIPF4-201ENST00000238831 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.87
YIPF4-201ENST00000238831 MT1HP80294 61 aa3.39□□□□□ -1.87
YIPF4-201ENST00000238831 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
YIPF4-201ENST00000238831 RYR1P21817 5038 aa3.38□□□□□ -1.87
YIPF4-201ENST00000238831 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
YIPF4-201ENST00000238831 SPRR2EP22531 72 aa3.34□□□□□ -1.87
YIPF4-201ENST00000238831 SPRR2BP35325 72 aa3.34□□□□□ -1.87
YIPF4-201ENST00000238831 SPRR2AP35326 72 aa3.34□□□□□ -1.87
YIPF4-201ENST00000238831 DNAH17Q9UFH2 4485 aa3.33□□□□□ -1.88
YIPF4-201ENST00000238831 RYR2Q92736 4967 aa3.33□□□□□ -1.88
YIPF4-201ENST00000238831 DYNC2H1Q8NCM8 4307 aaKnown RBP3.32□□□□□ -1.88
YIPF4-201ENST00000238831 ANK2Q01484 3957 aa3.32□□□□□ -1.88
YIPF4-201ENST00000238831 KRTAP4-1Q9BYQ7 146 aa3.31□□□□□ -1.88
YIPF4-201ENST00000238831 MT2AP02795 61 aa3.3□□□□□ -1.88
YIPF4-201ENST00000238831 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
YIPF4-201ENST00000238831 DNAH7Q8WXX0 4024 aa3.29□□□□□ -1.88
YIPF4-201ENST00000238831 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
YIPF4-201ENST00000238831 HECTD4Q9Y4D8 3996 aa3.26□□□□□ -1.89
YIPF4-201ENST00000238831 HERC1Q15751 4861 aa3.26□□□□□ -1.89
YIPF4-201ENST00000238831 FAT2Q9NYQ8 4349 aa3.25□□□□□ -1.89
YIPF4-201ENST00000238831 ZNF469Q96JG9 3925 aaPredicted RBP3.25□□□□□ -1.89
YIPF4-201ENST00000238831 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
YIPF4-201ENST00000238831 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
YIPF4-201ENST00000238831 MT1FP04733 61 aa3.23□□□□□ -1.89
YIPF4-201ENST00000238831 DNAH5Q8TE73 4624 aa3.23□□□□□ -1.89
YIPF4-201ENST00000238831 SPRR2DP22532 72 aa3.23□□□□□ -1.89
YIPF4-201ENST00000238831 DNAH8Q96JB1 4490 aa3.22□□□□□ -1.89
YIPF4-201ENST00000238831 VPS13BQ7Z7G8 4022 aa3.21□□□□□ -1.9
YIPF4-201ENST00000238831 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
YIPF4-201ENST00000238831 LYSTQ99698 3801 aa3.2□□□□□ -1.9
YIPF4-201ENST00000238831 DNAH9Q9NYC9 4486 aa3.19□□□□□ -1.9
YIPF4-201ENST00000238831 KMT2CQ8NEZ4 4911 aaKnown RBP3.19□□□□□ -1.9
YIPF4-201ENST00000238831 RYR3Q15413 4870 aa3.19□□□□□ -1.9
YIPF4-201ENST00000238831 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
YIPF4-201ENST00000238831 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
YIPF4-201ENST00000238831 LCE2BO14633 110 aa3.17□□□□□ -1.9
YIPF4-201ENST00000238831 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
YIPF4-201ENST00000238831 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
YIPF4-201ENST00000238831 KMT2AQ03164 3969 aa3.14□□□□□ -1.91
YIPF4-201ENST00000238831 SACSQ9NZJ4 4579 aa3.14□□□□□ -1.91
YIPF4-201ENST00000238831 MT1GP13640 62 aa3.13□□□□□ -1.91
YIPF4-201ENST00000238831 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
YIPF4-201ENST00000238831 PKHD1P08F94 4074 aa3.11□□□□□ -1.91
YIPF4-201ENST00000238831 HSPG2P98160 4391 aa3.11□□□□□ -1.91
YIPF4-201ENST00000238831 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.91
YIPF4-201ENST00000238831 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
YIPF4-201ENST00000238831 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
YIPF4-201ENST00000238831 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
YIPF4-201ENST00000238831 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
YIPF4-201ENST00000238831 LCE2CQ5TA81 110 aa3.02□□□□□ -1.93
YIPF4-201ENST00000238831 LRP1Q07954 4544 aaKnown RBP2.99□□□□□ -1.93
YIPF4-201ENST00000238831 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
YIPF4-201ENST00000238831 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
YIPF4-201ENST00000238831 FAT1Q14517 4588 aa2.98□□□□□ -1.93
YIPF4-201ENST00000238831 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
YIPF4-201ENST00000238831 LCE2DQ5TA82 110 aaPredicted RBP2.97□□□□□ -1.93
YIPF4-201ENST00000238831 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
YIPF4-201ENST00000238831 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
YIPF4-201ENST00000238831 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
YIPF4-201ENST00000238831 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
YIPF4-201ENST00000238831 KRTAP4-8Q9BYQ9 185 aa2.94□□□□□ -1.94
YIPF4-201ENST00000238831 MT4P47944 62 aa2.93□□□□□ -1.94
YIPF4-201ENST00000238831 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
YIPF4-201ENST00000238831 MT1XP80297 61 aa2.93□□□□□ -1.94
YIPF4-201ENST00000238831 FAT3Q8TDW7 4589 aa2.92□□□□□ -1.94
YIPF4-201ENST00000238831 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.94
YIPF4-201ENST00000238831 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.94
YIPF4-201ENST00000238831 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.95
YIPF4-201ENST00000238831 HERC2O95714 4834 aa2.88□□□□□ -1.95
YIPF4-201ENST00000238831 PKD1P98161 4303 aa2.85□□□□□ -1.95
YIPF4-201ENST00000238831 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
YIPF4-201ENST00000238831 MT1BP07438 61 aa2.82□□□□□ -1.96
YIPF4-201ENST00000238831 LRP2P98164 4655 aa2.82□□□□□ -1.96
YIPF4-201ENST00000238831 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
YIPF4-201ENST00000238831 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
YIPF4-201ENST00000238831 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
YIPF4-201ENST00000238831 KRTAP9-8Q9BYQ0 159 aa2.79□□□□□ -1.96
YIPF4-201ENST00000238831 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
YIPF4-201ENST00000238831 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
YIPF4-201ENST00000238831 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
YIPF4-201ENST00000238831 PRM1P04553 51 aa2.76□□□□□ -1.97
YIPF4-201ENST00000238831 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
YIPF4-201ENST00000238831 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms