RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
LTBR-201ENST00000228918 ROMO1P60602 79 aa8.49□□□□□ -1.05
LTBR-201ENST00000228918 HSPG2P98160 4391 aa8.45□□□□□ -1.06
LTBR-201ENST00000228918 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
LTBR-201ENST00000228918 Q5VSD8 79 aa8.42□□□□□ -1.06
LTBR-201ENST00000228918 XP32Q5T750 250 aa8.38□□□□□ -1.07
LTBR-201ENST00000228918 EPPK1P58107 5090 aaKnown RBP8.37□□□□□ -1.07
LTBR-201ENST00000228918 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
LTBR-201ENST00000228918 RYR1P21817 5038 aa8.34□□□□□ -1.07
LTBR-201ENST00000228918 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
LTBR-201ENST00000228918 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
LTBR-201ENST00000228918 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
LTBR-201ENST00000228918 K7ERS5 55 aa8.29□□□□□ -1.08
LTBR-201ENST00000228918 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
LTBR-201ENST00000228918 S4R3F8 94 aa8.28□□□□□ -1.08
LTBR-201ENST00000228918 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
LTBR-201ENST00000228918 P0C880 135 aa8.26□□□□□ -1.09
LTBR-201ENST00000228918 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
LTBR-201ENST00000228918 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
LTBR-201ENST00000228918 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
LTBR-201ENST00000228918 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
LTBR-201ENST00000228918 A0A0D9SG42 100 aa8.13□□□□□ -1.11
LTBR-201ENST00000228918 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
LTBR-201ENST00000228918 TPRXLQ17RH7 258 aa8.08□□□□□ -1.12
LTBR-201ENST00000228918 LPAP08519 4548 aa8.07□□□□□ -1.12
LTBR-201ENST00000228918 LRP2P98164 4655 aa8.05□□□□□ -1.12
LTBR-201ENST00000228918 SPINT4Q6UDR6 99 aa8.02□□□□□ -1.13
LTBR-201ENST00000228918 KRTAP12-2P59991 146 aa7.95□□□□□ -1.14
LTBR-201ENST00000228918 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
LTBR-201ENST00000228918 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
LTBR-201ENST00000228918 HERC2O95714 4834 aa7.93□□□□□ -1.14
LTBR-201ENST00000228918 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
LTBR-201ENST00000228918 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
LTBR-201ENST00000228918 M0QZ58 72 aa7.87□□□□□ -1.15
LTBR-201ENST00000228918 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
LTBR-201ENST00000228918 ABCA13Q86UQ4 5058 aa7.86□□□□□ -1.15
LTBR-201ENST00000228918 PCLOQ9Y6V0 5065 aa7.77□□□□□ -1.17
LTBR-201ENST00000228918 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
LTBR-201ENST00000228918 SEC61BP60468 96 aaKnown RBP7.73□□□□□ -1.17
LTBR-201ENST00000228918 R4GN34 69 aa7.67□□□□□ -1.18
LTBR-201ENST00000228918 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
LTBR-201ENST00000228918 J3QL48 77 aa7.61□□□□□ -1.19
LTBR-201ENST00000228918 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
LTBR-201ENST00000228918 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
LTBR-201ENST00000228918 HERC1Q15751 4861 aa7.48□□□□□ -1.21
LTBR-201ENST00000228918 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
LTBR-201ENST00000228918 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
LTBR-201ENST00000228918 MUC2Q02817 5179 aa7.29□□□□□ -1.24
LTBR-201ENST00000228918 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
LTBR-201ENST00000228918 A0A0A0MQY5 61 aa7.25□□□□□ -1.25
LTBR-201ENST00000228918 HMCN2Q8NDA2 5059 aa7.24□□□□□ -1.25
LTBR-201ENST00000228918 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
LTBR-201ENST00000228918 PP632Q6XCG6 107 aa7.18□□□□□ -1.26
LTBR-201ENST00000228918 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
LTBR-201ENST00000228918 UBR4Q5T4S7 5183 aa7.06□□□□□ -1.28
LTBR-201ENST00000228918 TNP1P09430 55 aa7.02□□□□□ -1.29
LTBR-201ENST00000228918 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
LTBR-201ENST00000228918 FAT4Q6V0I7 4981 aa6.97□□□□□ -1.29
LTBR-201ENST00000228918 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
LTBR-201ENST00000228918 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
LTBR-201ENST00000228918 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
LTBR-201ENST00000228918 MT1HP80294 61 aa6.87□□□□□ -1.31
LTBR-201ENST00000228918 M0R2T5 61 aa6.85□□□□□ -1.31
LTBR-201ENST00000228918 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
LTBR-201ENST00000228918 MT2AP02795 61 aa6.78□□□□□ -1.32
LTBR-201ENST00000228918 MT1FP04733 61 aa6.78□□□□□ -1.32
LTBR-201ENST00000228918 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
LTBR-201ENST00000228918 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.33
LTBR-201ENST00000228918 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
LTBR-201ENST00000228918 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
LTBR-201ENST00000228918 MT1BP07438 61 aa6.57□□□□□ -1.36
LTBR-201ENST00000228918 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
LTBR-201ENST00000228918 MT1XP80297 61 aa6.52□□□□□ -1.37
LTBR-201ENST00000228918 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
LTBR-201ENST00000228918 PRO2289Q9P1D8 64 aa6.47□□□□□ -1.37
LTBR-201ENST00000228918 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
LTBR-201ENST00000228918 LCE2AQ5TA79 106 aaPredicted RBP6.41□□□□□ -1.38
LTBR-201ENST00000228918 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
LTBR-201ENST00000228918 INE1O15225 51 aa6.34□□□□□ -1.39
LTBR-201ENST00000228918 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
LTBR-201ENST00000228918 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
LTBR-201ENST00000228918 LCE2BO14633 110 aa6.17□□□□□ -1.42
LTBR-201ENST00000228918 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
LTBR-201ENST00000228918 USH2AO75445 5202 aa5.99□□□□□ -1.45
LTBR-201ENST00000228918 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.45
LTBR-201ENST00000228918 FSIP2Q5CZC0 6907 aa5.96□□□□□ -1.46
LTBR-201ENST00000228918 KRTAP9-2Q9BYQ4 174 aa5.95□□□□□ -1.46
LTBR-201ENST00000228918 KMT2DO14686 5537 aa5.93□□□□□ -1.46
LTBR-201ENST00000228918 LCE2DQ5TA82 110 aaPredicted RBP5.93□□□□□ -1.46
LTBR-201ENST00000228918 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
LTBR-201ENST00000228918 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
LTBR-201ENST00000228918 KRTAP19-7Q3SYF9 63 aa5.81□□□□□ -1.48
LTBR-201ENST00000228918 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
LTBR-201ENST00000228918 SSPOA2VEC9 5147 aa5.69□□□□□ -1.5
LTBR-201ENST00000228918 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
LTBR-201ENST00000228918 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
LTBR-201ENST00000228918 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
LTBR-201ENST00000228918 MT1EP04732 61 aa5.64□□□□□ -1.51
LTBR-201ENST00000228918 MT1LQ93083 61 aa5.64□□□□□ -1.51
LTBR-201ENST00000228918 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 313 ms