RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 NDUFAF8A1L188 74 aa8.14□□□□□ -1.11
TGFB1-201ENST00000221930 FAT3Q8TDW7 4589 aa8.11□□□□□ -1.11
TGFB1-201ENST00000221930 TNXBP22105 4242 aa8.1□□□□□ -1.11
TGFB1-201ENST00000221930 HSPG2P98160 4391 aa8.09□□□□□ -1.11
TGFB1-201ENST00000221930 KRTAP10-8P60410 259 aa8.09□□□□□ -1.11
TGFB1-201ENST00000221930 Q5VSD8 79 aa8.09□□□□□ -1.11
TGFB1-201ENST00000221930 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
TGFB1-201ENST00000221930 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
TGFB1-201ENST00000221930 KIAA1109Q2LD37 5005 aa8.06□□□□□ -1.12
TGFB1-201ENST00000221930 KRTAP15-1Q3LI76 137 aa8.04□□□□□ -1.12
TGFB1-201ENST00000221930 K7ERS5 55 aa8.01□□□□□ -1.13
TGFB1-201ENST00000221930 A0A1B0GU33 70 aa8□□□□□ -1.13
TGFB1-201ENST00000221930 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
TGFB1-201ENST00000221930 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
TGFB1-201ENST00000221930 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
TGFB1-201ENST00000221930 H1FX-AS1Q4G0G2 97 aa7.94□□□□□ -1.14
TGFB1-201ENST00000221930 RYR1P21817 5038 aa7.91□□□□□ -1.14
TGFB1-201ENST00000221930 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
TGFB1-201ENST00000221930 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
TGFB1-201ENST00000221930 XP32Q5T750 250 aa7.86□□□□□ -1.15
TGFB1-201ENST00000221930 LPAP08519 4548 aa7.85□□□□□ -1.15
TGFB1-201ENST00000221930 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
TGFB1-201ENST00000221930 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
TGFB1-201ENST00000221930 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
TGFB1-201ENST00000221930 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.16
TGFB1-201ENST00000221930 LRP2P98164 4655 aa7.76□□□□□ -1.17
TGFB1-201ENST00000221930 KRTAP10-6P60371 365 aaPredicted RBP7.76□□□□□ -1.17
TGFB1-201ENST00000221930 BIRC6Q9NR09 4857 aa7.76□□□□□ -1.17
TGFB1-201ENST00000221930 S4R3F8 94 aa7.74□□□□□ -1.17
TGFB1-201ENST00000221930 KRTAP13-4Q3LI77 160 aa7.71□□□□□ -1.17
TGFB1-201ENST00000221930 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
TGFB1-201ENST00000221930 A0A0D9SG42 100 aa7.7□□□□□ -1.18
TGFB1-201ENST00000221930 KRTAP4-5Q9BYR2 181 aa7.68□□□□□ -1.18
TGFB1-201ENST00000221930 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
TGFB1-201ENST00000221930 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
TGFB1-201ENST00000221930 HERC2O95714 4834 aa7.52□□□□□ -1.2
TGFB1-201ENST00000221930 MUC2Q02817 5179 aa7.5□□□□□ -1.21
TGFB1-201ENST00000221930 KRTAP12-2P59991 146 aa7.46□□□□□ -1.21
TGFB1-201ENST00000221930 J3QL48 77 aa7.42□□□□□ -1.22
TGFB1-201ENST00000221930 KRTAP12-1P59990 96 aa7.37□□□□□ -1.23
TGFB1-201ENST00000221930 HERC1Q15751 4861 aa7.33□□□□□ -1.24
TGFB1-201ENST00000221930 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
TGFB1-201ENST00000221930 M0QZ58 72 aa7.31□□□□□ -1.24
TGFB1-201ENST00000221930 PCLOQ9Y6V0 5065 aa7.28□□□□□ -1.24
TGFB1-201ENST00000221930 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
TGFB1-201ENST00000221930 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
TGFB1-201ENST00000221930 R4GN34 69 aa7.21□□□□□ -1.25
TGFB1-201ENST00000221930 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
TGFB1-201ENST00000221930 LCE2DQ5TA82 110 aaPredicted RBP7.16□□□□□ -1.26
TGFB1-201ENST00000221930 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
TGFB1-201ENST00000221930 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
TGFB1-201ENST00000221930 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
TGFB1-201ENST00000221930 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
TGFB1-201ENST00000221930 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.29
TGFB1-201ENST00000221930 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
TGFB1-201ENST00000221930 HMCN2Q8NDA2 5059 aa6.93□□□□□ -1.3
TGFB1-201ENST00000221930 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
TGFB1-201ENST00000221930 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
TGFB1-201ENST00000221930 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
TGFB1-201ENST00000221930 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
TGFB1-201ENST00000221930 INE1O15225 51 aa6.58□□□□□ -1.36
TGFB1-201ENST00000221930 MT1HP80294 61 aa6.57□□□□□ -1.36
TGFB1-201ENST00000221930 M0R2T5 61 aa6.55□□□□□ -1.36
TGFB1-201ENST00000221930 TNP1P09430 55 aa6.55□□□□□ -1.36
TGFB1-201ENST00000221930 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
TGFB1-201ENST00000221930 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
TGFB1-201ENST00000221930 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
TGFB1-201ENST00000221930 MT1FP04733 61 aa6.39□□□□□ -1.39
TGFB1-201ENST00000221930 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
TGFB1-201ENST00000221930 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
TGFB1-201ENST00000221930 MT2AP02795 61 aa6.38□□□□□ -1.39
TGFB1-201ENST00000221930 USH2AO75445 5202 aa6.31□□□□□ -1.4
TGFB1-201ENST00000221930 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
TGFB1-201ENST00000221930 LCE3AQ5TA76 89 aa6.25□□□□□ -1.41
TGFB1-201ENST00000221930 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
TGFB1-201ENST00000221930 MT1BP07438 61 aa6.15□□□□□ -1.42
TGFB1-201ENST00000221930 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
TGFB1-201ENST00000221930 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
TGFB1-201ENST00000221930 MT1XP80297 61 aa6.12□□□□□ -1.43
TGFB1-201ENST00000221930 KMT2DO14686 5537 aa6.1□□□□□ -1.43
TGFB1-201ENST00000221930 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
TGFB1-201ENST00000221930 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
TGFB1-201ENST00000221930 LCE2BO14633 110 aa6.02□□□□□ -1.45
TGFB1-201ENST00000221930 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
TGFB1-201ENST00000221930 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
TGFB1-201ENST00000221930 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
TGFB1-201ENST00000221930 KRTAP9-2Q9BYQ4 174 aa5.79□□□□□ -1.48
TGFB1-201ENST00000221930 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
TGFB1-201ENST00000221930 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
TGFB1-201ENST00000221930 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
TGFB1-201ENST00000221930 KRTAP9-6A0A140TA67 174 aa5.61□□□□□ -1.51
TGFB1-201ENST00000221930 SSPOA2VEC9 5147 aa5.59□□□□□ -1.52
TGFB1-201ENST00000221930 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
TGFB1-201ENST00000221930 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
TGFB1-201ENST00000221930 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
TGFB1-201ENST00000221930 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
TGFB1-201ENST00000221930 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
TGFB1-201ENST00000221930 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
TGFB1-201ENST00000221930 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
TGFB1-201ENST00000221930 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms