RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 DNAH7Q8WXX0 4024 aa10.32□□□□□ -0.76
FMR1-201ENST00000218200 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
FMR1-201ENST00000218200 DNAH8Q96JB1 4490 aa10.3□□□□□ -0.76
FMR1-201ENST00000218200 KRTAP13-4Q3LI77 160 aa10.29□□□□□ -0.76
FMR1-201ENST00000218200 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
FMR1-201ENST00000218200 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
FMR1-201ENST00000218200 KRTAP12-1P59990 96 aa10.22□□□□□ -0.77
FMR1-201ENST00000218200 PP632Q6XCG6 107 aa10.22□□□□□ -0.77
FMR1-201ENST00000218200 ALMS1Q8TCU4 4167 aa10.19□□□□□ -0.78
FMR1-201ENST00000218200 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
FMR1-201ENST00000218200 KRTAP10-6P60371 365 aaPredicted RBP10.14□□□□□ -0.79
FMR1-201ENST00000218200 FAT1Q14517 4588 aa10.11□□□□□ -0.79
FMR1-201ENST00000218200 FRAS1Q86XX4 4008 aa10.1□□□□□ -0.79
FMR1-201ENST00000218200 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
FMR1-201ENST00000218200 DYNC1H1Q14204 4646 aaKnown RBP10.06□□□□□ -0.8
FMR1-201ENST00000218200 KRTAP10-10P60014 251 aa10.05□□□□□ -0.8
FMR1-201ENST00000218200 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
FMR1-201ENST00000218200 MT1HL1P0DM35 61 aa10□□□□□ -0.81
FMR1-201ENST00000218200 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
FMR1-201ENST00000218200 HYDINQ4G0P3 5121 aa9.84□□□□□ -0.83
FMR1-201ENST00000218200 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
FMR1-201ENST00000218200 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
FMR1-201ENST00000218200 SACSQ9NZJ4 4579 aa9.77□□□□□ -0.85
FMR1-201ENST00000218200 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
FMR1-201ENST00000218200 KRTAP4-5Q9BYR2 181 aa9.75□□□□□ -0.85
FMR1-201ENST00000218200 PKHD1P08F94 4074 aa9.65□□□□□ -0.86
FMR1-201ENST00000218200 APOBP04114 4563 aaKnown RBP9.6□□□□□ -0.87
FMR1-201ENST00000218200 KRTAP15-1Q3LI76 137 aa9.6□□□□□ -0.87
FMR1-201ENST00000218200 MYCBP2O75592 4640 aa9.59□□□□□ -0.87
FMR1-201ENST00000218200 KIAA1109Q2LD37 5005 aa9.56□□□□□ -0.88
FMR1-201ENST00000218200 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
FMR1-201ENST00000218200 RYR1P21817 5038 aa9.52□□□□□ -0.89
FMR1-201ENST00000218200 PKD1P98161 4303 aa9.49□□□□□ -0.89
FMR1-201ENST00000218200 RYR2Q92736 4967 aa9.44□□□□□ -0.9
FMR1-201ENST00000218200 RYR3Q15413 4870 aa9.43□□□□□ -0.9
FMR1-201ENST00000218200 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
FMR1-201ENST00000218200 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
FMR1-201ENST00000218200 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
FMR1-201ENST00000218200 KMT2CQ8NEZ4 4911 aaKnown RBP9.32□□□□□ -0.92
FMR1-201ENST00000218200 FAT3Q8TDW7 4589 aa9.3□□□□□ -0.92
FMR1-201ENST00000218200 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.95
FMR1-201ENST00000218200 HSPG2P98160 4391 aa9.14□□□□□ -0.95
FMR1-201ENST00000218200 LRP2P98164 4655 aa9.06□□□□□ -0.96
FMR1-201ENST00000218200 PKHD1L1Q86WI1 4243 aa8.92□□□□□ -0.98
FMR1-201ENST00000218200 LCE3AQ5TA76 89 aa8.88□□□□□ -0.99
FMR1-201ENST00000218200 TNXBP22105 4242 aa8.86□□□□□ -0.99
FMR1-201ENST00000218200 KRTAP10-12P60413 245 aa8.86□□□□□ -0.99
FMR1-201ENST00000218200 HERC2O95714 4834 aa8.83□□□□□ -1
FMR1-201ENST00000218200 CRCT1Q9UGL9 99 aa8.81□□□□□ -1
FMR1-201ENST00000218200 KRTAP12-3P60328 96 aa8.78□□□□□ -1
FMR1-201ENST00000218200 LPAP08519 4548 aa8.78□□□□□ -1
FMR1-201ENST00000218200 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
FMR1-201ENST00000218200 INE1O15225 51 aa8.61□□□□□ -1.03
FMR1-201ENST00000218200 ABCA13Q86UQ4 5058 aa8.52□□□□□ -1.05
FMR1-201ENST00000218200 MT1HP80294 61 aa8.46□□□□□ -1.05
FMR1-201ENST00000218200 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
FMR1-201ENST00000218200 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
FMR1-201ENST00000218200 SPRR2GQ9BYE4 73 aa8.35□□□□□ -1.07
FMR1-201ENST00000218200 MT2AP02795 61 aa8.35□□□□□ -1.07
FMR1-201ENST00000218200 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
FMR1-201ENST00000218200 MT1FP04733 61 aa8.29□□□□□ -1.08
FMR1-201ENST00000218200 HERC1Q15751 4861 aa8.24□□□□□ -1.09
FMR1-201ENST00000218200 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
FMR1-201ENST00000218200 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
FMR1-201ENST00000218200 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
FMR1-201ENST00000218200 MUC2Q02817 5179 aa8.13□□□□□ -1.11
FMR1-201ENST00000218200 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
FMR1-201ENST00000218200 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
FMR1-201ENST00000218200 FLGP20930 4061 aaPredicted RBP8.05□□□□□ -1.12
FMR1-201ENST00000218200 SYNE1Q8NF91 8797 aaKnown RBP8.02□□□□□ -1.13
FMR1-201ENST00000218200 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
FMR1-201ENST00000218200 KRTAP19-5Q3LI72 72 aa7.92□□□□□ -1.14
FMR1-201ENST00000218200 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
FMR1-201ENST00000218200 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
FMR1-201ENST00000218200 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
FMR1-201ENST00000218200 OBSCNQ5VST9 7968 aa7.86□□□□□ -1.15
FMR1-201ENST00000218200 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
FMR1-201ENST00000218200 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
FMR1-201ENST00000218200 MT1BP07438 61 aa7.81□□□□□ -1.16
FMR1-201ENST00000218200 KRTAP10-7P60409 375 aaPredicted RBP7.8□□□□□ -1.16
FMR1-201ENST00000218200 MT1XP80297 61 aa7.76□□□□□ -1.17
FMR1-201ENST00000218200 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
FMR1-201ENST00000218200 LCE3CQ5T5A8 94 aa7.71□□□□□ -1.17
FMR1-201ENST00000218200 FSIP2Q5CZC0 6907 aa7.7□□□□□ -1.18
FMR1-201ENST00000218200 KRTAP9-3Q9BYQ3 159 aa7.67□□□□□ -1.18
FMR1-201ENST00000218200 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
FMR1-201ENST00000218200 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
FMR1-201ENST00000218200 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.21
FMR1-201ENST00000218200 SPRR2FQ96RM1 72 aa7.44□□□□□ -1.22
FMR1-201ENST00000218200 LCE2BO14633 110 aa7.42□□□□□ -1.22
FMR1-201ENST00000218200 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
FMR1-201ENST00000218200 MT1GP13640 62 aa7.24□□□□□ -1.25
FMR1-201ENST00000218200 LCE3BQ5TA77 95 aa7.24□□□□□ -1.25
FMR1-201ENST00000218200 KRTAP12-4P60329 112 aa7.23□□□□□ -1.25
FMR1-201ENST00000218200 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
FMR1-201ENST00000218200 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
FMR1-201ENST00000218200 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
FMR1-201ENST00000218200 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
FMR1-201ENST00000218200 USH2AO75445 5202 aa6.92□□□□□ -1.3
FMR1-201ENST00000218200 MT1LQ93083 61 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms