RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
APOBEC3D-201ENST00000216099 FAT1Q14517 4588 aa5.82□□□□□ -1.48
APOBEC3D-201ENST00000216099 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
APOBEC3D-201ENST00000216099 ACYP2P14621 99 aa5.8□□□□□ -1.48
APOBEC3D-201ENST00000216099 Q5VSD8 79 aa5.8□□□□□ -1.48
APOBEC3D-201ENST00000216099 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
APOBEC3D-201ENST00000216099 A0A1B0GU69 56 aa5.78□□□□□ -1.48
APOBEC3D-201ENST00000216099 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
APOBEC3D-201ENST00000216099 FLG2Q5D862 2391 aaPredicted RBP5.76□□□□□ -1.49
APOBEC3D-201ENST00000216099 HSPG2P98160 4391 aa5.75□□□□□ -1.49
APOBEC3D-201ENST00000216099 UQCR11O14957 56 aa5.74□□□□□ -1.49
APOBEC3D-201ENST00000216099 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
APOBEC3D-201ENST00000216099 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
APOBEC3D-201ENST00000216099 RYR3Q15413 4870 aa5.69□□□□□ -1.5
APOBEC3D-201ENST00000216099 RYR1P21817 5038 aa5.69□□□□□ -1.5
APOBEC3D-201ENST00000216099 TNXBP22105 4242 aa5.69□□□□□ -1.5
APOBEC3D-201ENST00000216099 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
APOBEC3D-201ENST00000216099 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
APOBEC3D-201ENST00000216099 A0A1B0GU33 70 aa5.64□□□□□ -1.51
APOBEC3D-201ENST00000216099 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
APOBEC3D-201ENST00000216099 R4GN34 69 aa5.6□□□□□ -1.51
APOBEC3D-201ENST00000216099 LRP1Q07954 4544 aaKnown RBP5.6□□□□□ -1.51
APOBEC3D-201ENST00000216099 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
APOBEC3D-201ENST00000216099 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
APOBEC3D-201ENST00000216099 KIAA1109Q2LD37 5005 aa5.55□□□□□ -1.52
APOBEC3D-201ENST00000216099 XP32Q5T750 250 aa5.54□□□□□ -1.52
APOBEC3D-201ENST00000216099 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
APOBEC3D-201ENST00000216099 COX6B2Q6YFQ2 88 aa5.5□□□□□ -1.53
APOBEC3D-201ENST00000216099 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
APOBEC3D-201ENST00000216099 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
APOBEC3D-201ENST00000216099 EPPK1P58107 5090 aaKnown RBP5.48□□□□□ -1.53
APOBEC3D-201ENST00000216099 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
APOBEC3D-201ENST00000216099 H0YAA0 97 aa5.44□□□□□ -1.54
APOBEC3D-201ENST00000216099 CRIPTQ9P021 101 aa5.44□□□□□ -1.54
APOBEC3D-201ENST00000216099 MYCBP2O75592 4640 aa5.43□□□□□ -1.54
APOBEC3D-201ENST00000216099 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
APOBEC3D-201ENST00000216099 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
APOBEC3D-201ENST00000216099 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
APOBEC3D-201ENST00000216099 S4R3F8 94 aa5.31□□□□□ -1.56
APOBEC3D-201ENST00000216099 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
APOBEC3D-201ENST00000216099 HERC2O95714 4834 aa5.26□□□□□ -1.57
APOBEC3D-201ENST00000216099 KRTAP9-9Q9BYP9 154 aa5.25□□□□□ -1.57
APOBEC3D-201ENST00000216099 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
APOBEC3D-201ENST00000216099 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
APOBEC3D-201ENST00000216099 LRP2P98164 4655 aa5.23□□□□□ -1.57
APOBEC3D-201ENST00000216099 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
APOBEC3D-201ENST00000216099 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
APOBEC3D-201ENST00000216099 LPAP08519 4548 aa5.19□□□□□ -1.58
APOBEC3D-201ENST00000216099 KRTAP9-6A0A140TA67 174 aa5.18□□□□□ -1.58
APOBEC3D-201ENST00000216099 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
APOBEC3D-201ENST00000216099 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
APOBEC3D-201ENST00000216099 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
APOBEC3D-201ENST00000216099 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
APOBEC3D-201ENST00000216099 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
APOBEC3D-201ENST00000216099 KRTAP19-2Q3LHN2 52 aa5.06□□□□□ -1.6
APOBEC3D-201ENST00000216099 KRTAP13-4Q3LI77 160 aa5.06□□□□□ -1.6
APOBEC3D-201ENST00000216099 A0A0D9SG42 100 aa5.05□□□□□ -1.6
APOBEC3D-201ENST00000216099 M0QZ58 72 aa5.01□□□□□ -1.61
APOBEC3D-201ENST00000216099 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
APOBEC3D-201ENST00000216099 HERC1Q15751 4861 aa4.93□□□□□ -1.62
APOBEC3D-201ENST00000216099 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
APOBEC3D-201ENST00000216099 KRTAP12-1P59990 96 aa4.9□□□□□ -1.62
APOBEC3D-201ENST00000216099 KRTAP12-2P59991 146 aa4.9□□□□□ -1.62
APOBEC3D-201ENST00000216099 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
APOBEC3D-201ENST00000216099 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
APOBEC3D-201ENST00000216099 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
APOBEC3D-201ENST00000216099 MT1HP80294 61 aa4.72□□□□□ -1.65
APOBEC3D-201ENST00000216099 MUC2Q02817 5179 aa4.71□□□□□ -1.66
APOBEC3D-201ENST00000216099 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
APOBEC3D-201ENST00000216099 INE1O15225 51 aa4.68□□□□□ -1.66
APOBEC3D-201ENST00000216099 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
APOBEC3D-201ENST00000216099 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
APOBEC3D-201ENST00000216099 RNF213Q63HN8 5207 aa4.67□□□□□ -1.66
APOBEC3D-201ENST00000216099 M0R2T5 61 aa4.65□□□□□ -1.66
APOBEC3D-201ENST00000216099 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
APOBEC3D-201ENST00000216099 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
APOBEC3D-201ENST00000216099 MT2AP02795 61 aa4.6□□□□□ -1.67
APOBEC3D-201ENST00000216099 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
APOBEC3D-201ENST00000216099 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
APOBEC3D-201ENST00000216099 MT1FP04733 61 aa4.56□□□□□ -1.68
APOBEC3D-201ENST00000216099 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
APOBEC3D-201ENST00000216099 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
APOBEC3D-201ENST00000216099 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
APOBEC3D-201ENST00000216099 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
APOBEC3D-201ENST00000216099 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
APOBEC3D-201ENST00000216099 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
APOBEC3D-201ENST00000216099 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.69
APOBEC3D-201ENST00000216099 TNP1P09430 55 aa4.43□□□□□ -1.7
APOBEC3D-201ENST00000216099 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
APOBEC3D-201ENST00000216099 MT1BP07438 61 aa4.39□□□□□ -1.71
APOBEC3D-201ENST00000216099 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
APOBEC3D-201ENST00000216099 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
APOBEC3D-201ENST00000216099 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
APOBEC3D-201ENST00000216099 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
APOBEC3D-201ENST00000216099 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
APOBEC3D-201ENST00000216099 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
APOBEC3D-201ENST00000216099 MT1XP80297 61 aa4.29□□□□□ -1.72
APOBEC3D-201ENST00000216099 MT3P25713 68 aa4.28□□□□□ -1.72
APOBEC3D-201ENST00000216099 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
APOBEC3D-201ENST00000216099 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms