RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 KMT2AQ03164 3969 aa2.57□□□□□ -2
CBX5-201ENST00000209875 KRTAP10-12P60413 245 aa2.56□□□□□ -2
CBX5-201ENST00000209875 LYSTQ99698 3801 aa2.56□□□□□ -2
CBX5-201ENST00000209875 DNAH6Q9C0G6 4158 aa2.54□□□□□ -2
CBX5-201ENST00000209875 DNAH10Q8IVF4 4471 aa2.53□□□□□ -2.01
CBX5-201ENST00000209875 SPENQ96T58 3664 aaKnown RBP2.51□□□□□ -2.01
CBX5-201ENST00000209875 SVEP1Q4LDE5 3571 aa2.51□□□□□ -2.01
CBX5-201ENST00000209875 SMG1Q96Q15 3661 aaKnown RBP2.51□□□□□ -2.01
CBX5-201ENST00000209875 HERC1Q15751 4861 aa2.51□□□□□ -2.01
CBX5-201ENST00000209875 DNAH2Q9P225 4427 aa2.5□□□□□ -2.01
CBX5-201ENST00000209875 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
CBX5-201ENST00000209875 KRTAP12-3P60328 96 aa2.49□□□□□ -2.01
CBX5-201ENST00000209875 PRKDCP78527 4128 aaKnown RBP2.49□□□□□ -2.01
CBX5-201ENST00000209875 CSMD2Q7Z408 3487 aa2.49□□□□□ -2.01
CBX5-201ENST00000209875 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
CBX5-201ENST00000209875 CUBNO60494 3623 aa2.46□□□□□ -2.02
CBX5-201ENST00000209875 ANK3Q12955 4377 aaKnown RBP2.44□□□□□ -2.02
CBX5-201ENST00000209875 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
CBX5-201ENST00000209875 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
CBX5-201ENST00000209875 MYCBP2O75592 4640 aa2.4□□□□□ -2.02
CBX5-201ENST00000209875 PLECQ15149 4684 aaKnown RBP2.4□□□□□ -2.03
CBX5-201ENST00000209875 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
CBX5-201ENST00000209875 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
CBX5-201ENST00000209875 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
CBX5-201ENST00000209875 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
CBX5-201ENST00000209875 KRTAP4-5Q9BYR2 181 aa2.35□□□□□ -2.03
CBX5-201ENST00000209875 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
CBX5-201ENST00000209875 RYR1P21817 5038 aa2.35□□□□□ -2.03
CBX5-201ENST00000209875 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
CBX5-201ENST00000209875 HSPG2P98160 4391 aa2.33□□□□□ -2.04
CBX5-201ENST00000209875 RYR2Q92736 4967 aa2.32□□□□□ -2.04
CBX5-201ENST00000209875 DNAH1Q9P2D7 4330 aa2.3□□□□□ -2.04
CBX5-201ENST00000209875 MT1HP80294 61 aa2.29□□□□□ -2.04
CBX5-201ENST00000209875 MT2AP02795 61 aa2.29□□□□□ -2.04
CBX5-201ENST00000209875 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
CBX5-201ENST00000209875 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
CBX5-201ENST00000209875 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
CBX5-201ENST00000209875 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
CBX5-201ENST00000209875 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
CBX5-201ENST00000209875 KRTAP10-5P60370 271 aa2.26□□□□□ -2.05
CBX5-201ENST00000209875 VPS13DQ5THJ4 4388 aa2.25□□□□□ -2.05
CBX5-201ENST00000209875 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
CBX5-201ENST00000209875 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
CBX5-201ENST00000209875 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
CBX5-201ENST00000209875 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
CBX5-201ENST00000209875 DNAH8Q96JB1 4490 aa2.21□□□□□ -2.06
CBX5-201ENST00000209875 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.06
CBX5-201ENST00000209875 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
CBX5-201ENST00000209875 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
CBX5-201ENST00000209875 RYR3Q15413 4870 aa2.19□□□□□ -2.06
CBX5-201ENST00000209875 MT1FP04733 61 aa2.18□□□□□ -2.06
CBX5-201ENST00000209875 KMT2CQ8NEZ4 4911 aaKnown RBP2.18□□□□□ -2.06
CBX5-201ENST00000209875 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
CBX5-201ENST00000209875 KRTAP10-7P60409 375 aaPredicted RBP2.17□□□□□ -2.06
CBX5-201ENST00000209875 FAT1Q14517 4588 aa2.15□□□□□ -2.06
CBX5-201ENST00000209875 DNHD1Q96M86 4753 aa2.15□□□□□ -2.07
CBX5-201ENST00000209875 DYNC2H1Q8NCM8 4307 aaKnown RBP2.14□□□□□ -2.07
CBX5-201ENST00000209875 KRTAP19-1Q8IUB9 90 aa2.14□□□□□ -2.07
CBX5-201ENST00000209875 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
CBX5-201ENST00000209875 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
CBX5-201ENST00000209875 HERC2O95714 4834 aa2.1□□□□□ -2.07
CBX5-201ENST00000209875 MT1GP13640 62 aa2.1□□□□□ -2.07
CBX5-201ENST00000209875 FAT2Q9NYQ8 4349 aa2.09□□□□□ -2.07
CBX5-201ENST00000209875 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
CBX5-201ENST00000209875 PKHD1L1Q86WI1 4243 aa2.07□□□□□ -2.08
CBX5-201ENST00000209875 LRP2P98164 4655 aa2.06□□□□□ -2.08
CBX5-201ENST00000209875 STARD9Q9P2P6 4700 aa2.06□□□□□ -2.08
CBX5-201ENST00000209875 MT1XP80297 61 aa2.06□□□□□ -2.08
CBX5-201ENST00000209875 KRTAP17-1Q9BYP8 105 aa2.06□□□□□ -2.08
CBX5-201ENST00000209875 MT1BP07438 61 aa2.06□□□□□ -2.08
CBX5-201ENST00000209875 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
CBX5-201ENST00000209875 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
CBX5-201ENST00000209875 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
CBX5-201ENST00000209875 TNXBP22105 4242 aa2.02□□□□□ -2.09
CBX5-201ENST00000209875 KRTAP12-4P60329 112 aa2□□□□□ -2.09
CBX5-201ENST00000209875 PKD1P98161 4303 aa2□□□□□ -2.09
CBX5-201ENST00000209875 LCE2CQ5TA81 110 aa2□□□□□ -2.09
CBX5-201ENST00000209875 MT1LQ93083 61 aa2□□□□□ -2.09
CBX5-201ENST00000209875 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
CBX5-201ENST00000209875 ABCA13Q86UQ4 5058 aa1.97□□□□□ -2.09
CBX5-201ENST00000209875 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
CBX5-201ENST00000209875 KRTAP19-3Q7Z4W3 81 aa1.95□□□□□ -2.1
CBX5-201ENST00000209875 MT1EP04732 61 aa1.95□□□□□ -2.1
CBX5-201ENST00000209875 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 HYDINQ4G0P3 5121 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 MUC17Q685J3 4493 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 KRTAP19-2Q3LHN2 52 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 KRTAP19-6Q3LI70 58 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 LCE2BO14633 110 aa1.94□□□□□ -2.1
CBX5-201ENST00000209875 SPRR2EP22531 72 aa1.93□□□□□ -2.1
CBX5-201ENST00000209875 SPRR2BP35325 72 aa1.93□□□□□ -2.1
CBX5-201ENST00000209875 SPRR2AP35326 72 aa1.93□□□□□ -2.1
CBX5-201ENST00000209875 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CBX5-201ENST00000209875 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
CBX5-201ENST00000209875 LCE3BQ5TA77 95 aa1.9□□□□□ -2.11
CBX5-201ENST00000209875 RNF213Q63HN8 5207 aa1.9□□□□□ -2.11
CBX5-201ENST00000209875 UBR4Q5T4S7 5183 aa1.86□□□□□ -2.11
CBX5-201ENST00000209875 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.11
CBX5-201ENST00000209875 MT1MQ8N339 61 aa1.84□□□□□ -2.12
CBX5-201ENST00000209875 HMCN2Q8NDA2 5059 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms