RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 A0A1B0GVY2 172 aa8.71□□□□□ -1.02
PTPN18-201ENST00000175756 J3QL48 77 aa8.71□□□□□ -1.02
PTPN18-201ENST00000175756 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
PTPN18-201ENST00000175756 KRTAP10-6P60371 365 aaPredicted RBP8.69□□□□□ -1.02
PTPN18-201ENST00000175756 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
PTPN18-201ENST00000175756 M0QZ58 72 aa8.67□□□□□ -1.02
PTPN18-201ENST00000175756 R4GN34 69 aa8.66□□□□□ -1.02
PTPN18-201ENST00000175756 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
PTPN18-201ENST00000175756 TPRXLQ17RH7 258 aa8.64□□□□□ -1.03
PTPN18-201ENST00000175756 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
PTPN18-201ENST00000175756 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
PTPN18-201ENST00000175756 FAT2Q9NYQ8 4349 aa8.61□□□□□ -1.03
PTPN18-201ENST00000175756 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
PTPN18-201ENST00000175756 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
PTPN18-201ENST00000175756 KMT2CQ8NEZ4 4911 aaKnown RBP8.54□□□□□ -1.04
PTPN18-201ENST00000175756 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
PTPN18-201ENST00000175756 SACSQ9NZJ4 4579 aa8.52□□□□□ -1.05
PTPN18-201ENST00000175756 PKD1P98161 4303 aa8.51□□□□□ -1.05
PTPN18-201ENST00000175756 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
PTPN18-201ENST00000175756 CAMK2N1Q7Z7J9 78 aa8.46□□□□□ -1.06
PTPN18-201ENST00000175756 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
PTPN18-201ENST00000175756 FAT3Q8TDW7 4589 aa8.44□□□□□ -1.06
PTPN18-201ENST00000175756 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
PTPN18-201ENST00000175756 RYR1P21817 5038 aa8.33□□□□□ -1.08
PTPN18-201ENST00000175756 RYR3Q15413 4870 aa8.32□□□□□ -1.08
PTPN18-201ENST00000175756 SEC61BP60468 96 aaKnown RBP8.31□□□□□ -1.08
PTPN18-201ENST00000175756 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
PTPN18-201ENST00000175756 MT1HL1P0DM35 61 aa8.25□□□□□ -1.09
PTPN18-201ENST00000175756 HSPG2P98160 4391 aa8.22□□□□□ -1.09
PTPN18-201ENST00000175756 LUZP6Q538Z0 58 aa8.21□□□□□ -1.09
PTPN18-201ENST00000175756 LRP2P98164 4655 aa8.15□□□□□ -1.1
PTPN18-201ENST00000175756 RYR2Q92736 4967 aa8.14□□□□□ -1.11
PTPN18-201ENST00000175756 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
PTPN18-201ENST00000175756 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
PTPN18-201ENST00000175756 KRTAP17-1Q9BYP8 105 aa8.1□□□□□ -1.11
PTPN18-201ENST00000175756 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
PTPN18-201ENST00000175756 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
PTPN18-201ENST00000175756 M0R2T5 61 aa7.99□□□□□ -1.13
PTPN18-201ENST00000175756 EPPK1P58107 5090 aaKnown RBP7.97□□□□□ -1.13
PTPN18-201ENST00000175756 LPAP08519 4548 aa7.94□□□□□ -1.14
PTPN18-201ENST00000175756 TNXBP22105 4242 aa7.87□□□□□ -1.15
PTPN18-201ENST00000175756 TNP1P09430 55 aa7.83□□□□□ -1.16
PTPN18-201ENST00000175756 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
PTPN18-201ENST00000175756 HERC2O95714 4834 aa7.79□□□□□ -1.16
PTPN18-201ENST00000175756 KRTAP4-1Q9BYQ7 146 aa7.79□□□□□ -1.16
PTPN18-201ENST00000175756 PP632Q6XCG6 107 aa7.78□□□□□ -1.16
PTPN18-201ENST00000175756 ABCA13Q86UQ4 5058 aa7.69□□□□□ -1.18
PTPN18-201ENST00000175756 MUC2Q02817 5179 aa7.69□□□□□ -1.18
PTPN18-201ENST00000175756 HERC1Q15751 4861 aa7.52□□□□□ -1.21
PTPN18-201ENST00000175756 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
PTPN18-201ENST00000175756 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
PTPN18-201ENST00000175756 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
PTPN18-201ENST00000175756 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
PTPN18-201ENST00000175756 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
PTPN18-201ENST00000175756 UBR4Q5T4S7 5183 aa7.25□□□□□ -1.25
PTPN18-201ENST00000175756 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
PTPN18-201ENST00000175756 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
PTPN18-201ENST00000175756 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
PTPN18-201ENST00000175756 FSIP2Q5CZC0 6907 aa7.02□□□□□ -1.29
PTPN18-201ENST00000175756 FLGP20930 4061 aaPredicted RBP7.01□□□□□ -1.29
PTPN18-201ENST00000175756 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
PTPN18-201ENST00000175756 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
PTPN18-201ENST00000175756 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
PTPN18-201ENST00000175756 MT1FP04733 61 aa6.94□□□□□ -1.3
PTPN18-201ENST00000175756 MT1HP80294 61 aa6.93□□□□□ -1.3
PTPN18-201ENST00000175756 MT2AP02795 61 aa6.91□□□□□ -1.3
PTPN18-201ENST00000175756 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
PTPN18-201ENST00000175756 HMCN2Q8NDA2 5059 aa6.89□□□□□ -1.31
PTPN18-201ENST00000175756 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
PTPN18-201ENST00000175756 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
PTPN18-201ENST00000175756 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
PTPN18-201ENST00000175756 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
PTPN18-201ENST00000175756 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
PTPN18-201ENST00000175756 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
PTPN18-201ENST00000175756 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
PTPN18-201ENST00000175756 USH2AO75445 5202 aa6.62□□□□□ -1.35
PTPN18-201ENST00000175756 MT1XP80297 61 aa6.62□□□□□ -1.35
PTPN18-201ENST00000175756 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
PTPN18-201ENST00000175756 MT1BP07438 61 aa6.6□□□□□ -1.35
PTPN18-201ENST00000175756 INE1O15225 51 aa6.55□□□□□ -1.36
PTPN18-201ENST00000175756 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
PTPN18-201ENST00000175756 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
PTPN18-201ENST00000175756 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
PTPN18-201ENST00000175756 KMT2DO14686 5537 aa6.35□□□□□ -1.39
PTPN18-201ENST00000175756 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
PTPN18-201ENST00000175756 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
PTPN18-201ENST00000175756 LCE3CQ5T5A8 94 aa6.32□□□□□ -1.4
PTPN18-201ENST00000175756 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
PTPN18-201ENST00000175756 LCE2BO14633 110 aa6.19□□□□□ -1.42
PTPN18-201ENST00000175756 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
PTPN18-201ENST00000175756 OBSCNQ5VST9 7968 aa6.14□□□□□ -1.43
PTPN18-201ENST00000175756 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
PTPN18-201ENST00000175756 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
PTPN18-201ENST00000175756 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
PTPN18-201ENST00000175756 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
PTPN18-201ENST00000175756 LCE2AQ5TA79 106 aaPredicted RBP5.85□□□□□ -1.47
PTPN18-201ENST00000175756 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.48
PTPN18-201ENST00000175756 MT1LQ93083 61 aa5.78□□□□□ -1.48
PTPN18-201ENST00000175756 MT1GP13640 62 aa5.76□□□□□ -1.49
PTPN18-201ENST00000175756 MUC12Q9UKN1 5478 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms