RNA–Protein interactions for RNA: ENST00000052569.10

GOPC-201, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GOPC, Length 4,590 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-201ENST00000052569 FAT1Q14517 4588 aa6.74□□□□□ -1.33
GOPC-201ENST00000052569 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.33
GOPC-201ENST00000052569 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.33
GOPC-201ENST00000052569 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
GOPC-201ENST00000052569 KRTAP10-4P60372 401 aaPredicted RBP6.68□□□□□ -1.34
GOPC-201ENST00000052569 LYSTQ99698 3801 aa6.67□□□□□ -1.34
GOPC-201ENST00000052569 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.34
GOPC-201ENST00000052569 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.35
GOPC-201ENST00000052569 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
GOPC-201ENST00000052569 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
GOPC-201ENST00000052569 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
GOPC-201ENST00000052569 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
GOPC-201ENST00000052569 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
GOPC-201ENST00000052569 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
GOPC-201ENST00000052569 FRAS1Q86XX4 4008 aa6.53□□□□□ -1.36
GOPC-201ENST00000052569 RYR1P21817 5038 aa6.51□□□□□ -1.37
GOPC-201ENST00000052569 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
GOPC-201ENST00000052569 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.37
GOPC-201ENST00000052569 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.38
GOPC-201ENST00000052569 ALMS1Q8TCU4 4167 aa6.44□□□□□ -1.38
GOPC-201ENST00000052569 DNAH7Q8WXX0 4024 aa6.43□□□□□ -1.38
GOPC-201ENST00000052569 DNAH17Q9UFH2 4485 aa6.42□□□□□ -1.38
GOPC-201ENST00000052569 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
GOPC-201ENST00000052569 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
GOPC-201ENST00000052569 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
GOPC-201ENST00000052569 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
GOPC-201ENST00000052569 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
GOPC-201ENST00000052569 SACSQ9NZJ4 4579 aa6.32□□□□□ -1.4
GOPC-201ENST00000052569 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
GOPC-201ENST00000052569 DNAH6Q9C0G6 4158 aa6.26□□□□□ -1.41
GOPC-201ENST00000052569 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
GOPC-201ENST00000052569 RYR3Q15413 4870 aa6.24□□□□□ -1.41
GOPC-201ENST00000052569 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
GOPC-201ENST00000052569 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
GOPC-201ENST00000052569 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
GOPC-201ENST00000052569 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
GOPC-201ENST00000052569 APOBP04114 4563 aaKnown RBP6.17□□□□□ -1.42
GOPC-201ENST00000052569 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
GOPC-201ENST00000052569 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
GOPC-201ENST00000052569 FAT2Q9NYQ8 4349 aa6.1□□□□□ -1.43
GOPC-201ENST00000052569 INE1O15225 51 aa6.09□□□□□ -1.43
GOPC-201ENST00000052569 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
GOPC-201ENST00000052569 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
GOPC-201ENST00000052569 LRP2P98164 4655 aa6.06□□□□□ -1.44
GOPC-201ENST00000052569 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
GOPC-201ENST00000052569 KMT2CQ8NEZ4 4911 aaKnown RBP6.03□□□□□ -1.44
GOPC-201ENST00000052569 RYR2Q92736 4967 aa5.96□□□□□ -1.45
GOPC-201ENST00000052569 HERC2O95714 4834 aa5.9□□□□□ -1.46
GOPC-201ENST00000052569 MT1HP80294 61 aa5.84□□□□□ -1.48
GOPC-201ENST00000052569 MT2AP02795 61 aa5.83□□□□□ -1.48
GOPC-201ENST00000052569 PKD1P98161 4303 aa5.82□□□□□ -1.48
GOPC-201ENST00000052569 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
GOPC-201ENST00000052569 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
GOPC-201ENST00000052569 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
GOPC-201ENST00000052569 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
GOPC-201ENST00000052569 LPAP08519 4548 aa5.74□□□□□ -1.49
GOPC-201ENST00000052569 MT1FP04733 61 aa5.74□□□□□ -1.49
GOPC-201ENST00000052569 EPPK1P58107 5090 aaKnown RBP5.69□□□□□ -1.5
GOPC-201ENST00000052569 HSPG2P98160 4391 aa5.67□□□□□ -1.5
GOPC-201ENST00000052569 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
GOPC-201ENST00000052569 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
GOPC-201ENST00000052569 BIRC6Q9NR09 4857 aa5.55□□□□□ -1.52
GOPC-201ENST00000052569 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
GOPC-201ENST00000052569 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
GOPC-201ENST00000052569 PKHD1L1Q86WI1 4243 aa5.47□□□□□ -1.53
GOPC-201ENST00000052569 MUC2Q02817 5179 aa5.47□□□□□ -1.53
GOPC-201ENST00000052569 RNF213Q63HN8 5207 aa5.45□□□□□ -1.54
GOPC-201ENST00000052569 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
GOPC-201ENST00000052569 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
GOPC-201ENST00000052569 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.55
GOPC-201ENST00000052569 TNXBP22105 4242 aa5.37□□□□□ -1.55
GOPC-201ENST00000052569 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
GOPC-201ENST00000052569 HERC1Q15751 4861 aa5.37□□□□□ -1.55
GOPC-201ENST00000052569 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
GOPC-201ENST00000052569 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
GOPC-201ENST00000052569 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
GOPC-201ENST00000052569 MT1XP80297 61 aa5.3□□□□□ -1.56
GOPC-201ENST00000052569 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
GOPC-201ENST00000052569 MT1BP07438 61 aa5.27□□□□□ -1.57
GOPC-201ENST00000052569 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
GOPC-201ENST00000052569 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
GOPC-201ENST00000052569 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
GOPC-201ENST00000052569 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
GOPC-201ENST00000052569 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
GOPC-201ENST00000052569 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
GOPC-201ENST00000052569 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
GOPC-201ENST00000052569 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
GOPC-201ENST00000052569 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
GOPC-201ENST00000052569 MT1GP13640 62 aa5.07□□□□□ -1.6
GOPC-201ENST00000052569 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
GOPC-201ENST00000052569 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
GOPC-201ENST00000052569 HMCN2Q8NDA2 5059 aa5.02□□□□□ -1.61
GOPC-201ENST00000052569 KRTAP12-4P60329 112 aa5□□□□□ -1.61
GOPC-201ENST00000052569 LCE2BO14633 110 aa4.95□□□□□ -1.62
GOPC-201ENST00000052569 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
GOPC-201ENST00000052569 SPRR2EP22531 72 aa4.93□□□□□ -1.62
GOPC-201ENST00000052569 SPRR2BP35325 72 aa4.93□□□□□ -1.62
GOPC-201ENST00000052569 SPRR2AP35326 72 aa4.93□□□□□ -1.62
GOPC-201ENST00000052569 DSTQ03001 7570 aaKnown RBP4.85□□□□□ -1.63
GOPC-201ENST00000052569 USH2AO75445 5202 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms