RNA–Protein interactions for RNA: ENST00000007722.11

ITGA3-201, Transcript of integrin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ITGA3, Length 3,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-201ENST00000007722 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
ITGA3-201ENST00000007722 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
ITGA3-201ENST00000007722 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
ITGA3-201ENST00000007722 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
ITGA3-201ENST00000007722 KRTAP10-8P60410 259 aa6.64□□□□□ -1.35
ITGA3-201ENST00000007722 PKD1P98161 4303 aa6.62□□□□□ -1.35
ITGA3-201ENST00000007722 FAT1Q14517 4588 aa6.61□□□□□ -1.35
ITGA3-201ENST00000007722 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
ITGA3-201ENST00000007722 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
ITGA3-201ENST00000007722 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
ITGA3-201ENST00000007722 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
ITGA3-201ENST00000007722 XP32Q5T750 250 aa6.49□□□□□ -1.37
ITGA3-201ENST00000007722 M0QZ58 72 aa6.46□□□□□ -1.38
ITGA3-201ENST00000007722 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
ITGA3-201ENST00000007722 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
ITGA3-201ENST00000007722 LUZP6Q538Z0 58 aa6.4□□□□□ -1.39
ITGA3-201ENST00000007722 R4GN34 69 aa6.39□□□□□ -1.39
ITGA3-201ENST00000007722 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
ITGA3-201ENST00000007722 Q5VSD8 79 aa6.38□□□□□ -1.39
ITGA3-201ENST00000007722 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
ITGA3-201ENST00000007722 HSPG2P98160 4391 aa6.37□□□□□ -1.39
ITGA3-201ENST00000007722 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
ITGA3-201ENST00000007722 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
ITGA3-201ENST00000007722 J3QL48 77 aa6.34□□□□□ -1.39
ITGA3-201ENST00000007722 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
ITGA3-201ENST00000007722 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
ITGA3-201ENST00000007722 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
ITGA3-201ENST00000007722 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
ITGA3-201ENST00000007722 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
ITGA3-201ENST00000007722 LPAP08519 4548 aa6.15□□□□□ -1.42
ITGA3-201ENST00000007722 RYR2Q92736 4967 aa6.15□□□□□ -1.43
ITGA3-201ENST00000007722 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
ITGA3-201ENST00000007722 RYR3Q15413 4870 aa6.13□□□□□ -1.43
ITGA3-201ENST00000007722 LRP2P98164 4655 aa6.11□□□□□ -1.43
ITGA3-201ENST00000007722 TNXBP22105 4242 aa6.09□□□□□ -1.43
ITGA3-201ENST00000007722 KRTAP4-5Q9BYR2 181 aa6.06□□□□□ -1.44
ITGA3-201ENST00000007722 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
ITGA3-201ENST00000007722 RYR1P21817 5038 aa6.03□□□□□ -1.44
ITGA3-201ENST00000007722 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
ITGA3-201ENST00000007722 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
ITGA3-201ENST00000007722 MT1HL1P0DM35 61 aa6□□□□□ -1.45
ITGA3-201ENST00000007722 PP632Q6XCG6 107 aa6□□□□□ -1.45
ITGA3-201ENST00000007722 TNP1P09430 55 aa5.87□□□□□ -1.47
ITGA3-201ENST00000007722 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
ITGA3-201ENST00000007722 HERC2O95714 4834 aa5.75□□□□□ -1.49
ITGA3-201ENST00000007722 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
ITGA3-201ENST00000007722 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
ITGA3-201ENST00000007722 BIRC6Q9NR09 4857 aa5.56□□□□□ -1.52
ITGA3-201ENST00000007722 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
ITGA3-201ENST00000007722 HERC1Q15751 4861 aa5.56□□□□□ -1.52
ITGA3-201ENST00000007722 M0R2T5 61 aa5.55□□□□□ -1.52
ITGA3-201ENST00000007722 MUC2Q02817 5179 aa5.53□□□□□ -1.52
ITGA3-201ENST00000007722 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
ITGA3-201ENST00000007722 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
ITGA3-201ENST00000007722 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
ITGA3-201ENST00000007722 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
ITGA3-201ENST00000007722 PRO2289Q9P1D8 64 aa5.48□□□□□ -1.53
ITGA3-201ENST00000007722 RNF213Q63HN8 5207 aa5.42□□□□□ -1.54
ITGA3-201ENST00000007722 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.56
ITGA3-201ENST00000007722 FLGP20930 4061 aaPredicted RBP5.32□□□□□ -1.56
ITGA3-201ENST00000007722 INE1O15225 51 aa5.32□□□□□ -1.56
ITGA3-201ENST00000007722 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
ITGA3-201ENST00000007722 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
ITGA3-201ENST00000007722 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
ITGA3-201ENST00000007722 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
ITGA3-201ENST00000007722 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
ITGA3-201ENST00000007722 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
ITGA3-201ENST00000007722 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.58
ITGA3-201ENST00000007722 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
ITGA3-201ENST00000007722 MT1FP04733 61 aa5.09□□□□□ -1.59
ITGA3-201ENST00000007722 LCE2CQ5TA81 110 aa5.09□□□□□ -1.6
ITGA3-201ENST00000007722 MT2AP02795 61 aa5.05□□□□□ -1.6
ITGA3-201ENST00000007722 MT1HP80294 61 aa5.01□□□□□ -1.61
ITGA3-201ENST00000007722 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
ITGA3-201ENST00000007722 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
ITGA3-201ENST00000007722 MT1XP80297 61 aa5□□□□□ -1.61
ITGA3-201ENST00000007722 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
ITGA3-201ENST00000007722 MT1BP07438 61 aa4.93□□□□□ -1.62
ITGA3-201ENST00000007722 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
ITGA3-201ENST00000007722 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
ITGA3-201ENST00000007722 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
ITGA3-201ENST00000007722 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
ITGA3-201ENST00000007722 KMT2DO14686 5537 aa4.76□□□□□ -1.65
ITGA3-201ENST00000007722 USH2AO75445 5202 aa4.73□□□□□ -1.65
ITGA3-201ENST00000007722 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
ITGA3-201ENST00000007722 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
ITGA3-201ENST00000007722 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
ITGA3-201ENST00000007722 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
ITGA3-201ENST00000007722 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
ITGA3-201ENST00000007722 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
ITGA3-201ENST00000007722 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
ITGA3-201ENST00000007722 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
ITGA3-201ENST00000007722 LCE2BO14633 110 aa4.5□□□□□ -1.69
ITGA3-201ENST00000007722 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
ITGA3-201ENST00000007722 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
ITGA3-201ENST00000007722 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
ITGA3-201ENST00000007722 MT1LQ93083 61 aa4.35□□□□□ -1.71
ITGA3-201ENST00000007722 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
ITGA3-201ENST00000007722 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
ITGA3-201ENST00000007722 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms