RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 P0C880 135 aa10.37□□□□□ -0.75
HOXA11-201ENST00000006015 RYR3Q15413 4870 aa10.36□□□□□ -0.75
HOXA11-201ENST00000006015 HSPG2P98160 4391 aa10.33□□□□□ -0.76
HOXA11-201ENST00000006015 RPL37P61927 97 aaKnown RBP10.32□□□□□ -0.76
HOXA11-201ENST00000006015 TNXBP22105 4242 aa10.3□□□□□ -0.76
HOXA11-201ENST00000006015 FAT3Q8TDW7 4589 aa10.25□□□□□ -0.77
HOXA11-201ENST00000006015 KRTAP10-6P60371 365 aaPredicted RBP10.22□□□□□ -0.77
HOXA11-201ENST00000006015 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
HOXA11-201ENST00000006015 TPRXLQ17RH7 258 aa10.19□□□□□ -0.78
HOXA11-201ENST00000006015 MYCBP2O75592 4640 aa10.18□□□□□ -0.78
HOXA11-201ENST00000006015 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
HOXA11-201ENST00000006015 Q5VSD8 79 aa10.16□□□□□ -0.78
HOXA11-201ENST00000006015 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
HOXA11-201ENST00000006015 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
HOXA11-201ENST00000006015 RYR1P21817 5038 aa10.15□□□□□ -0.78
HOXA11-201ENST00000006015 A0A0D9SG42 100 aa10.14□□□□□ -0.79
HOXA11-201ENST00000006015 KRTAP3-3Q9BYR6 98 aa10.12□□□□□ -0.79
HOXA11-201ENST00000006015 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
HOXA11-201ENST00000006015 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
HOXA11-201ENST00000006015 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
HOXA11-201ENST00000006015 C10orf95Q9H7T3 257 aa10.04□□□□□ -0.8
HOXA11-201ENST00000006015 KRTAP15-1Q3LI76 137 aa10.01□□□□□ -0.81
HOXA11-201ENST00000006015 S4R3F8 94 aa10□□□□□ -0.81
HOXA11-201ENST00000006015 EPPK1P58107 5090 aaKnown RBP9.99□□□□□ -0.81
HOXA11-201ENST00000006015 NDUFAF8A1L188 74 aa9.93□□□□□ -0.82
HOXA11-201ENST00000006015 KRTAP12-2P59991 146 aa9.9□□□□□ -0.82
HOXA11-201ENST00000006015 XP32Q5T750 250 aa9.86□□□□□ -0.83
HOXA11-201ENST00000006015 MT1HL1P0DM35 61 aa9.86□□□□□ -0.83
HOXA11-201ENST00000006015 LPAP08519 4548 aa9.86□□□□□ -0.83
HOXA11-201ENST00000006015 KRTAP12-1P59990 96 aa9.81□□□□□ -0.84
HOXA11-201ENST00000006015 LRP2P98164 4655 aa9.77□□□□□ -0.85
HOXA11-201ENST00000006015 ABCA13Q86UQ4 5058 aa9.74□□□□□ -0.85
HOXA11-201ENST00000006015 KRTAP4-5Q9BYR2 181 aa9.68□□□□□ -0.86
HOXA11-201ENST00000006015 M0QZ58 72 aa9.67□□□□□ -0.86
HOXA11-201ENST00000006015 HERC2O95714 4834 aa9.39□□□□□ -0.91
HOXA11-201ENST00000006015 PLAC4Q8WY50 150 aa9.33□□□□□ -0.92
HOXA11-201ENST00000006015 R4GN34 69 aa9.29□□□□□ -0.92
HOXA11-201ENST00000006015 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
HOXA11-201ENST00000006015 J3QL48 77 aa9.25□□□□□ -0.93
HOXA11-201ENST00000006015 KRTAP4-1Q9BYQ7 146 aa9.19□□□□□ -0.94
HOXA11-201ENST00000006015 MUC2Q02817 5179 aa9.18□□□□□ -0.94
HOXA11-201ENST00000006015 SEC61BP60468 96 aaKnown RBP9.14□□□□□ -0.95
HOXA11-201ENST00000006015 LUZP6Q538Z0 58 aa9.14□□□□□ -0.95
HOXA11-201ENST00000006015 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
HOXA11-201ENST00000006015 A0A0A0MQY5 61 aa9.1□□□□□ -0.95
HOXA11-201ENST00000006015 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
HOXA11-201ENST00000006015 HERC1Q15751 4861 aa9.04□□□□□ -0.96
HOXA11-201ENST00000006015 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.96
HOXA11-201ENST00000006015 PCLOQ9Y6V0 5065 aa8.96□□□□□ -0.98
HOXA11-201ENST00000006015 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
HOXA11-201ENST00000006015 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
HOXA11-201ENST00000006015 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
HOXA11-201ENST00000006015 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
HOXA11-201ENST00000006015 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
HOXA11-201ENST00000006015 KRTAP23-1A1A580 65 aa8.67□□□□□ -1.02
HOXA11-201ENST00000006015 SPRR5A0A1B0GTR4 108 aa8.65□□□□□ -1.03
HOXA11-201ENST00000006015 TNP1P09430 55 aa8.64□□□□□ -1.03
HOXA11-201ENST00000006015 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
HOXA11-201ENST00000006015 UBR4Q5T4S7 5183 aa8.55□□□□□ -1.04
HOXA11-201ENST00000006015 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
HOXA11-201ENST00000006015 M0R2T5 61 aa8.31□□□□□ -1.08
HOXA11-201ENST00000006015 MT1HP80294 61 aa8.27□□□□□ -1.09
HOXA11-201ENST00000006015 KRTAP19-1Q8IUB9 90 aa8.17□□□□□ -1.1
HOXA11-201ENST00000006015 PRO2289Q9P1D8 64 aa8.17□□□□□ -1.1
HOXA11-201ENST00000006015 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
HOXA11-201ENST00000006015 MT1FP04733 61 aa8.1□□□□□ -1.11
HOXA11-201ENST00000006015 MT2AP02795 61 aa8.09□□□□□ -1.11
HOXA11-201ENST00000006015 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
HOXA11-201ENST00000006015 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
HOXA11-201ENST00000006015 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
HOXA11-201ENST00000006015 INE1O15225 51 aa8.04□□□□□ -1.12
HOXA11-201ENST00000006015 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
HOXA11-201ENST00000006015 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
HOXA11-201ENST00000006015 MT1BP07438 61 aa7.76□□□□□ -1.17
HOXA11-201ENST00000006015 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.17
HOXA11-201ENST00000006015 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
HOXA11-201ENST00000006015 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
HOXA11-201ENST00000006015 MT1XP80297 61 aa7.66□□□□□ -1.18
HOXA11-201ENST00000006015 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
HOXA11-201ENST00000006015 USH2AO75445 5202 aa7.6□□□□□ -1.19
HOXA11-201ENST00000006015 LCE2BO14633 110 aa7.48□□□□□ -1.21
HOXA11-201ENST00000006015 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
HOXA11-201ENST00000006015 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
HOXA11-201ENST00000006015 KMT2DO14686 5537 aa7.37□□□□□ -1.23
HOXA11-201ENST00000006015 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
HOXA11-201ENST00000006015 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
HOXA11-201ENST00000006015 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
HOXA11-201ENST00000006015 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
HOXA11-201ENST00000006015 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
HOXA11-201ENST00000006015 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
HOXA11-201ENST00000006015 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
HOXA11-201ENST00000006015 SSPOA2VEC9 5147 aa7□□□□□ -1.29
HOXA11-201ENST00000006015 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
HOXA11-201ENST00000006015 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
HOXA11-201ENST00000006015 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
HOXA11-201ENST00000006015 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
HOXA11-201ENST00000006015 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
HOXA11-201ENST00000006015 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
HOXA11-201ENST00000006015 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
HOXA11-201ENST00000006015 MT1EP04732 61 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms