RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 NBEAL1Q6ZS30 2694 aa2.08□□□□□ -2.08
CFTR-201ENST00000003084 C10orf95Q9H7T3 257 aa2.08□□□□□ -2.08
CFTR-201ENST00000003084 NOTCH1P46531 2555 aa2.06□□□□□ -2.08
CFTR-201ENST00000003084 FBN3Q75N90 2809 aa2.06□□□□□ -2.08
CFTR-201ENST00000003084 NBEAL2Q6ZNJ1 2754 aa2.06□□□□□ -2.08
CFTR-201ENST00000003084 LCE5AQ5TCM9 118 aa2.05□□□□□ -2.08
CFTR-201ENST00000003084 TENM1Q9UKZ4 2725 aa2.05□□□□□ -2.08
CFTR-201ENST00000003084 DNAH3Q8TD57 4116 aa2.05□□□□□ -2.08
CFTR-201ENST00000003084 MT1HL1P0DM35 61 aa2.05□□□□□ -2.08
CFTR-201ENST00000003084 KRTAP19-1Q8IUB9 90 aa2.05□□□□□ -2.08
CFTR-201ENST00000003084 KRTAP9-7A8MTY7 169 aa2.02□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP4-8A0A0G2JLE6 195 aa2.02□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP13-4Q3LI77 160 aa2.02□□□□□ -2.09
CFTR-201ENST00000003084 DNAH1Q9P2D7 4330 aa2.02□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP10-4P60372 401 aaPredicted RBP2.02□□□□□ -2.09
CFTR-201ENST00000003084 MEGF8Q7Z7M0 2845 aa2.01□□□□□ -2.09
CFTR-201ENST00000003084 DMBT1Q9UGM3 2413 aaPredicted RBP2□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP9-1A8MXZ3 250 aaPredicted RBP2□□□□□ -2.09
CFTR-201ENST00000003084 TENM2Q9NT68 2774 aa2□□□□□ -2.09
CFTR-201ENST00000003084 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
CFTR-201ENST00000003084 STAB2Q8WWQ8 2551 aa1.97□□□□□ -2.09
CFTR-201ENST00000003084 KRTAP4-5Q9BYR2 181 aa1.96□□□□□ -2.1
CFTR-201ENST00000003084 DNAH9Q9NYC9 4486 aa1.96□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
CFTR-201ENST00000003084 DNAH2Q9P225 4427 aa1.95□□□□□ -2.1
CFTR-201ENST00000003084 DNAH10Q8IVF4 4471 aa1.95□□□□□ -2.1
CFTR-201ENST00000003084 DYNC2H1Q8NCM8 4307 aaKnown RBP1.95□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP4-7Q9BYR0 210 aa1.94□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP9-4Q9BYQ2 154 aa1.94□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP10-6P60371 365 aaPredicted RBP1.93□□□□□ -2.1
CFTR-201ENST00000003084 PRKDCP78527 4128 aaKnown RBP1.92□□□□□ -2.1
CFTR-201ENST00000003084 FRAS1Q86XX4 4008 aa1.92□□□□□ -2.1
CFTR-201ENST00000003084 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
CFTR-201ENST00000003084 KRTAP4-9Q9BYQ8 210 aa1.92□□□□□ -2.1
CFTR-201ENST00000003084 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
CFTR-201ENST00000003084 FAT2Q9NYQ8 4349 aa1.91□□□□□ -2.1
CFTR-201ENST00000003084 TENM3Q9P273 2699 aa1.9□□□□□ -2.11
CFTR-201ENST00000003084 HECTD4Q9Y4D8 3996 aa1.89□□□□□ -2.11
CFTR-201ENST00000003084 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
CFTR-201ENST00000003084 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
CFTR-201ENST00000003084 PLECQ15149 4684 aaKnown RBP1.88□□□□□ -2.11
CFTR-201ENST00000003084 STARD9Q9P2P6 4700 aa1.88□□□□□ -2.11
CFTR-201ENST00000003084 DNAH11Q96DT5 4516 aa1.88□□□□□ -2.11
CFTR-201ENST00000003084 TGP01266 2768 aa1.88□□□□□ -2.11
CFTR-201ENST00000003084 KRTAP10-12P60413 245 aa1.88□□□□□ -2.11
CFTR-201ENST00000003084 DYNC1H1Q14204 4646 aaKnown RBP1.87□□□□□ -2.11
CFTR-201ENST00000003084 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
CFTR-201ENST00000003084 KRTAP9-3Q9BYQ3 159 aa1.85□□□□□ -2.11
CFTR-201ENST00000003084 DNAH17Q9UFH2 4485 aa1.85□□□□□ -2.11
CFTR-201ENST00000003084 DNAH8Q96JB1 4490 aa1.83□□□□□ -2.12
CFTR-201ENST00000003084 INE1O15225 51 aa1.83□□□□□ -2.12
CFTR-201ENST00000003084 DNHD1Q96M86 4753 aa1.83□□□□□ -2.12
CFTR-201ENST00000003084 PKD1P98161 4303 aa1.82□□□□□ -2.12
CFTR-201ENST00000003084 DNAH5Q8TE73 4624 aa1.81□□□□□ -2.12
CFTR-201ENST00000003084 HYDINQ4G0P3 5121 aa1.81□□□□□ -2.12
CFTR-201ENST00000003084 MT1HP80294 61 aa1.8□□□□□ -2.12
CFTR-201ENST00000003084 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
CFTR-201ENST00000003084 PKHD1P08F94 4074 aa1.79□□□□□ -2.12
CFTR-201ENST00000003084 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.13
CFTR-201ENST00000003084 HERC1Q15751 4861 aa1.78□□□□□ -2.13
CFTR-201ENST00000003084 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
CFTR-201ENST00000003084 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
CFTR-201ENST00000003084 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
CFTR-201ENST00000003084 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
CFTR-201ENST00000003084 KRTAP9-8Q9BYQ0 159 aa1.75□□□□□ -2.13
CFTR-201ENST00000003084 PKHD1L1Q86WI1 4243 aa1.75□□□□□ -2.13
CFTR-201ENST00000003084 RYR2Q92736 4967 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 MT2AP02795 61 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 HSPG2P98160 4391 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 LCE3CQ5T5A8 94 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 RYR3Q15413 4870 aa1.74□□□□□ -2.13
CFTR-201ENST00000003084 LRP1BQ9NZR2 4599 aa1.73□□□□□ -2.13
CFTR-201ENST00000003084 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
CFTR-201ENST00000003084 OBSCNQ5VST9 7968 aa1.71□□□□□ -2.14
CFTR-201ENST00000003084 FAT1Q14517 4588 aa1.71□□□□□ -2.14
CFTR-201ENST00000003084 RYR1P21817 5038 aa1.71□□□□□ -2.14
CFTR-201ENST00000003084 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
CFTR-201ENST00000003084 MT1FP04733 61 aa1.69□□□□□ -2.14
CFTR-201ENST00000003084 APOBP04114 4563 aaKnown RBP1.69□□□□□ -2.14
CFTR-201ENST00000003084 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
CFTR-201ENST00000003084 TNXBP22105 4242 aa1.68□□□□□ -2.14
CFTR-201ENST00000003084 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
CFTR-201ENST00000003084 MUC17Q685J3 4493 aa1.65□□□□□ -2.15
CFTR-201ENST00000003084 KRTAP19-8Q3LI54 63 aa1.64□□□□□ -2.15
CFTR-201ENST00000003084 PCLOQ9Y6V0 5065 aa1.64□□□□□ -2.15
CFTR-201ENST00000003084 SPRR2FQ96RM1 72 aa1.63□□□□□ -2.15
CFTR-201ENST00000003084 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
CFTR-201ENST00000003084 ABCA13Q86UQ4 5058 aa1.62□□□□□ -2.15
CFTR-201ENST00000003084 KRTAP2-2Q9BYT5 123 aa1.62□□□□□ -2.15
CFTR-201ENST00000003084 MUC2Q02817 5179 aa1.61□□□□□ -2.15
CFTR-201ENST00000003084 BIRC6Q9NR09 4857 aa1.61□□□□□ -2.15
CFTR-201ENST00000003084 KRTAP10-5P60370 271 aa1.61□□□□□ -2.15
CFTR-201ENST00000003084 LPAP08519 4548 aa1.61□□□□□ -2.15
CFTR-201ENST00000003084 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
CFTR-201ENST00000003084 SPRR2EP22531 72 aa1.59□□□□□ -2.16
CFTR-201ENST00000003084 SPRR2BP35325 72 aa1.59□□□□□ -2.16
CFTR-201ENST00000003084 SPRR2AP35326 72 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms