RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Setd2E9Q5F9 2537 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Igkv4-81A0A0G2JEY5 119 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1245A0A1L1SQJ6 307 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Rhox7bA6PW38 321 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Znf239P24399 201 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Arl14eplQ3UKZ7 152 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Pafah1b2Q61206 229 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 PpbpQ9EQI5 113 aa11.27□□□□□ -0.6
Nup88-202ENSMUST00000108530 Rnf212F6TQD1 307 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 A930003A15RikQ3U552 87 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Rasl10aQ8K5A4 203 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Atp6v0bQ91V37 205 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 EpcamQ99JW5 315 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Psmg3Q9CZH3 122 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ceacam11Q9D0Z8 303 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Them7Q9DCP4 223 aa11.27□□□□□ -0.61
Nup88-202ENSMUST00000108530 Trav7-5A0A0G2JFX6 112 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Scgb2a2J3KMP9 96 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Pex7P97865 318 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Defb26Q30KN7 186 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Wipf2Q6PEV3 440 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Muc15Q8C6Z1 331 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Mien1Q9CQ86 115 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Nat6Q9R123 314 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Bex1Q9R224 128 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ighv1-16A0A075B5U1 98 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ighv1-53A0A075B5W3 117 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm15056F6ZR08 88 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gosr1O88630 250 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 AW146154Q3TPQ7 468 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Q4KKZ1 196 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm5148Q8BGG2 154 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Lypd1Q8BLC3 141 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm10118Q8C8J5 116 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 3110018I06RikQ9CXS0 120 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Vmn1r63Q9EPT1 300 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 TroQ6DIC6 2087 aa11.26□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm21874J3QNZ6 232 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Cib3Q0P523 160 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Trdv2-2Q5R1A4 116 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Dpm3Q9D1Q4 92 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Mapk1ip1Q9D7G9 263 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 LfngO09010 378 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Acrv1P50289 261 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ang5Q5GAN1 145 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ifi27l2bQ8VC49 283 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Akap13E9Q394 2776 aa11.25□□□□□ -0.61
Nup88-202ENSMUST00000108530 Tmem141A2AJB2 108 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Vmn1r1E9PVR6 306 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Fam19a2Q7TPG7 131 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Obox8V9GWY9 217 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Trav6d-7A0A075B6B0 112 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ly86O88188 162 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Stxbp6Q8R3T5 210 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Olfr481Q8VGI5 312 aa11.24□□□□□ -0.61
Nup88-202ENSMUST00000108530 Tcrg-V6A0A075B5Y8 134 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Adam8Q05910 826 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Zfp248Q640N4 576 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Golt1bQ9CR60 138 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 AplnrQ9WV08 377 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Timm10bQ9WV96 100 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm9602J3QPD5 205 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Tnfrsf9P20334 256 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Shisal1Q0VBP7 198 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Tctex1d4Q8CDY7 219 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Cotl1Q9CQI6 142 aa11.23□□□□□ -0.61
Nup88-202ENSMUST00000108530 Igkv20-101-2A0A0G2JDU3 113 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Ighv1-62-3P01754 117 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 P01812 117 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Bri3P28662 125 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Cited1P97769 203 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Fam222aQ6PGH4 453 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Pla2g2eQ9QUL3 142 aa11.22□□□□□ -0.61
Nup88-202ENSMUST00000108530 Zfp930A0A1D5RM15 441 aa11.21□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm5878E9PUB3 99 aa11.21□□□□□ -0.61
Nup88-202ENSMUST00000108530 Srp14P16254 110 aaKnown RBP11.21□□□□□ -0.61
Nup88-202ENSMUST00000108530 Gm9944Q8C559 102 aa11.21□□□□□ -0.61
Nup88-202ENSMUST00000108530 Fhl1P97447 280 aaKnown RBP11.21□□□□□ -0.62
Nup88-202ENSMUST00000108530 ChtopQ9CY57 249 aaKnown RBP11.21□□□□□ -0.62
Nup88-202ENSMUST00000108530 Znf580Q9DB38 172 aa11.21□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm33815A0A087WNV3 176 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm29644A0A087WPG2 191 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Olfr984Q8VFN1 314 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ufc1Q9CR09 167 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Trav16nA0A075B634 117 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm3250E9Q1M3 230 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm11027G8JL69 66 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Odf1Q61999 247 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Jpt2Q6PGH2 190 aaKnown RBP11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Gm11733Q8BQP1 125 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 QrfpQ8CE23 124 aa11.2□□□□□ -0.62
Nup88-202ENSMUST00000108530 Ighv3-8A0A075B5T0 131 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 P01793 123 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 Mapk1ip1lQ8BH93 242 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 Q9CR34 168 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 UrahQ9CRB3 118 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 F2rl1P55086 399 aa11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 Timm8bP62077 83 aaKnown RBP11.19□□□□□ -0.62
Nup88-202ENSMUST00000108530 Wfdc15aQ8BH89 80 aa11.18□□□□□ -0.62
Nup88-202ENSMUST00000108530 Tmem177Q8BPE4 311 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms