RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
PHGDH-233ENST00000642021 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
PHGDH-233ENST00000642021 Q8N9P0 234 aaPredicted RBP8.27□□□□□ -1.09
PHGDH-233ENST00000642021 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
PHGDH-233ENST00000642021 A0A087X002 238 aa8.26□□□□□ -1.09
PHGDH-233ENST00000642021 NOTCH2NLQ7Z3S9 236 aa8.26□□□□□ -1.09
PHGDH-233ENST00000642021 PRKDCP78527 4128 aaKnown RBP8.25□□□□□ -1.09
PHGDH-233ENST00000642021 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
PHGDH-233ENST00000642021 IGLV5-52A0A0A0MRZ9 124 aa8.25□□□□□ -1.09
PHGDH-233ENST00000642021 LINC01554Q52M75 96 aa8.24□□□□□ -1.09
PHGDH-233ENST00000642021 RTL8CO15255 209 aa8.24□□□□□ -1.09
PHGDH-233ENST00000642021 LIMD2Q9BT23 127 aa8.24□□□□□ -1.09
PHGDH-233ENST00000642021 A0A1B0GVX0 72 aa8.23□□□□□ -1.09
PHGDH-233ENST00000642021 LINC00313P59037 77 aa8.23□□□□□ -1.09
PHGDH-233ENST00000642021 COA5Q86WW8 74 aa8.23□□□□□ -1.09
PHGDH-233ENST00000642021 TP53AIP1Q9HCN2 124 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 TGP01266 2768 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 FBN3Q75N90 2809 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 Q6ZR54 194 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 ZNF861PO60384 105 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 PRAC1Q96KF2 57 aa8.22□□□□□ -1.09
PHGDH-233ENST00000642021 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
PHGDH-233ENST00000642021 ZNF706Q9Y5V0 76 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-233ENST00000642021 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
PHGDH-233ENST00000642021 Q75L30 129 aa8.19□□□□□ -1.1
PHGDH-233ENST00000642021 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
PHGDH-233ENST00000642021 MEGF8Q7Z7M0 2845 aa8.17□□□□□ -1.1
PHGDH-233ENST00000642021 CDK2AP2O75956 126 aa8.17□□□□□ -1.1
PHGDH-233ENST00000642021 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
PHGDH-233ENST00000642021 DNAH6Q9C0G6 4158 aa8.15□□□□□ -1.11
PHGDH-233ENST00000642021 ALMS1Q8TCU4 4167 aa8.14□□□□□ -1.11
PHGDH-233ENST00000642021 Q5W150 140 aa8.13□□□□□ -1.11
PHGDH-233ENST00000642021 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
PHGDH-233ENST00000642021 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
PHGDH-233ENST00000642021 IGLV7-43P04211 117 aa8.1□□□□□ -1.11
PHGDH-233ENST00000642021 HRES1P13985 223 aa8.1□□□□□ -1.11
PHGDH-233ENST00000642021 LOC101927531A0A1B0GV80 90 aa8.1□□□□□ -1.11
PHGDH-233ENST00000642021 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
PHGDH-233ENST00000642021 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
PHGDH-233ENST00000642021 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.11
PHGDH-233ENST00000642021 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
PHGDH-233ENST00000642021 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
PHGDH-233ENST00000642021 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
PHGDH-233ENST00000642021 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
PHGDH-233ENST00000642021 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
PHGDH-233ENST00000642021 KRTAP10-2P60368 255 aa8□□□□□ -1.13
PHGDH-233ENST00000642021 SSBP3-AS1Q7Z2R9 100 aa7.99□□□□□ -1.13
PHGDH-233ENST00000642021 LY6G6CO95867 125 aa7.99□□□□□ -1.13
PHGDH-233ENST00000642021 SPINK7P58062 85 aa7.98□□□□□ -1.13
PHGDH-233ENST00000642021 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
PHGDH-233ENST00000642021 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
PHGDH-233ENST00000642021 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
PHGDH-233ENST00000642021 HYDINQ4G0P3 5121 aa7.93□□□□□ -1.14
PHGDH-233ENST00000642021 PKD1P98161 4303 aa7.92□□□□□ -1.14
PHGDH-233ENST00000642021 ACYP2P14621 99 aa7.9□□□□□ -1.14
PHGDH-233ENST00000642021 A0A0A0MQY5 61 aa7.9□□□□□ -1.15
PHGDH-233ENST00000642021 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
PHGDH-233ENST00000642021 KRTAP10-1P60331 282 aa7.89□□□□□ -1.15
PHGDH-233ENST00000642021 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
PHGDH-233ENST00000642021 FAT2Q9NYQ8 4349 aa7.88□□□□□ -1.15
PHGDH-233ENST00000642021 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
PHGDH-233ENST00000642021 KRTAP16-1A8MUX0 517 aa7.87□□□□□ -1.15
PHGDH-233ENST00000642021 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
PHGDH-233ENST00000642021 KRTAP1-4P0C5Y4 121 aa7.85□□□□□ -1.15
PHGDH-233ENST00000642021 Q6ZSA8 131 aa7.85□□□□□ -1.15
PHGDH-233ENST00000642021 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
PHGDH-233ENST00000642021 IGKV2D-30A0A075B6S6 120 aa7.78□□□□□ -1.16
PHGDH-233ENST00000642021 A0A1B0GU69 56 aa7.73□□□□□ -1.17
PHGDH-233ENST00000642021 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.17
PHGDH-233ENST00000642021 PKHD1P08F94 4074 aa7.71□□□□□ -1.18
PHGDH-233ENST00000642021 ROMO1P60602 79 aa7.69□□□□□ -1.18
PHGDH-233ENST00000642021 SPINK1P00995 79 aa7.67□□□□□ -1.18
PHGDH-233ENST00000642021 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
PHGDH-233ENST00000642021 Q8N1X5 172 aa7.63□□□□□ -1.19
PHGDH-233ENST00000642021 SACSQ9NZJ4 4579 aa7.6□□□□□ -1.19
PHGDH-233ENST00000642021 FAT1Q14517 4588 aa7.6□□□□□ -1.19
PHGDH-233ENST00000642021 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
PHGDH-233ENST00000642021 UQCR11O14957 56 aa7.59□□□□□ -1.19
PHGDH-233ENST00000642021 MIR22HGQ0VDD5 57 aa7.59□□□□□ -1.19
PHGDH-233ENST00000642021 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
PHGDH-233ENST00000642021 SMR3BP02814 79 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-233ENST00000642021 C9orf92A6NGG3 77 aa7.53□□□□□ -1.2
PHGDH-233ENST00000642021 P0C880 135 aa7.51□□□□□ -1.21
PHGDH-233ENST00000642021 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
PHGDH-233ENST00000642021 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
PHGDH-233ENST00000642021 APOBP04114 4563 aaKnown RBP7.48□□□□□ -1.21
PHGDH-233ENST00000642021 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
PHGDH-233ENST00000642021 A8MUU9 505 aa7.46□□□□□ -1.22
PHGDH-233ENST00000642021 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
PHGDH-233ENST00000642021 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
PHGDH-233ENST00000642021 KRTAP10-4P60372 401 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-233ENST00000642021 H0YAA0 97 aa7.38□□□□□ -1.23
PHGDH-233ENST00000642021 A0A1B0GVY2 172 aa7.36□□□□□ -1.23
PHGDH-233ENST00000642021 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
PHGDH-233ENST00000642021 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-233ENST00000642021 FAT3Q8TDW7 4589 aa7.3□□□□□ -1.24
PHGDH-233ENST00000642021 A0A1B0GU33 70 aa7.3□□□□□ -1.24
PHGDH-233ENST00000642021 RYR2Q92736 4967 aa7.3□□□□□ -1.24
PHGDH-233ENST00000642021 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
PHGDH-233ENST00000642021 KMT2CQ8NEZ4 4911 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms