RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	CD164	Q04900	197 aa		6.05	□□□□□ -1.44
NECAP1-223	ENST00000640091	KRTAP4-5	Q9BYR2	181 aa		6.05	□□□□□ -1.44
NECAP1-223	ENST00000640091	TRAV7	A0A075B6U4	112 aa		6.05	□□□□□ -1.44
NECAP1-223	ENST00000640091	SMIM26	A0A096LP01	95 aa		6.05	□□□□□ -1.44
NECAP1-223	ENST00000640091	LINC00472	Q9H8W2	130 aa		6.05	□□□□□ -1.44
NECAP1-223	ENST00000640091	CXCL6	P80162	114 aa		6.04	□□□□□ -1.44
NECAP1-223	ENST00000640091	C4orf48	Q5BLP8	95 aa		6.04	□□□□□ -1.44
NECAP1-223	ENST00000640091	PKHD1L1	Q86WI1	4243 aa		6.04	□□□□□ -1.44
NECAP1-223	ENST00000640091	DSCR10	P59022	87 aa		6.03	□□□□□ -1.44
NECAP1-223	ENST00000640091		Q96NJ1	140 aa		6.03	□□□□□ -1.44
NECAP1-223	ENST00000640091	LINC00304	Q8N9R0	145 aa		6.02	□□□□□ -1.45
NECAP1-223	ENST00000640091	MYCBP2	O75592	4640 aa		6.02	□□□□□ -1.45
NECAP1-223	ENST00000640091	SPINK1	P00995	79 aa		6.01	□□□□□ -1.45
NECAP1-223	ENST00000640091	IGKV4-1	P06312	121 aa		6.01	□□□□□ -1.45
NECAP1-223	ENST00000640091		K7EQZ3	153 aa		6	□□□□□ -1.45
NECAP1-223	ENST00000640091	ATP5E	P56381	51 aa	Predicted RBP	6	□□□□□ -1.45
NECAP1-223	ENST00000640091	NDUFC1	O43677	76 aa		5.99	□□□□□ -1.45
NECAP1-223	ENST00000640091	BIRC6	Q9NR09	4857 aa		5.99	□□□□□ -1.45
NECAP1-223	ENST00000640091	KRTAP10-8	P60410	259 aa		5.99	□□□□□ -1.45
NECAP1-223	ENST00000640091	TNXB	P22105	4242 aa		5.98	□□□□□ -1.45
NECAP1-223	ENST00000640091	FAT3	Q8TDW7	4589 aa		5.97	□□□□□ -1.45
NECAP1-223	ENST00000640091	C1orf195	Q5TG92	126 aa		5.97	□□□□□ -1.45
NECAP1-223	ENST00000640091	SPAG11A	Q6PDA7	123 aa		5.97	□□□□□ -1.45
NECAP1-223	ENST00000640091	LIMD2	Q9BT23	127 aa		5.96	□□□□□ -1.45
NECAP1-223	ENST00000640091		A8MWP4	228 aa		5.96	□□□□□ -1.46
NECAP1-223	ENST00000640091	ASB16-AS1	Q495Z4	193 aa		5.95	□□□□□ -1.46
NECAP1-223	ENST00000640091		J3QL48	77 aa		5.95	□□□□□ -1.46
NECAP1-223	ENST00000640091	PRR15	Q8IV56	129 aa		5.94	□□□□□ -1.46
NECAP1-223	ENST00000640091	SNURF	Q9Y675	71 aa		5.94	□□□□□ -1.46
NECAP1-223	ENST00000640091	NDUFB1	O75438	58 aa		5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091		V9GYY9	64 aa		5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091	IGHV6-1	A0A0B4J1U7	121 aa		5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091	MT1HL1	P0DM35	61 aa		5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091	SEC61G	P60059	68 aa		5.93	□□□□□ -1.46
NECAP1-223	ENST00000640091	RPS29	P62273	56 aa	Known RBP	5.92	□□□□□ -1.46
NECAP1-223	ENST00000640091	RETNLB	Q9BQ08	111 aa		5.92	□□□□□ -1.46
NECAP1-223	ENST00000640091	ABCA13	Q86UQ4	5058 aa		5.92	□□□□□ -1.46
NECAP1-223	ENST00000640091	NOTCH2NL	Q7Z3S9	236 aa		5.92	□□□□□ -1.46
NECAP1-223	ENST00000640091	HERC2	O95714	4834 aa		5.91	□□□□□ -1.46
NECAP1-223	ENST00000640091	WFDC13	Q8IUB5	93 aa		5.91	□□□□□ -1.46
NECAP1-223	ENST00000640091	BRK1	Q8WUW1	75 aa		5.91	□□□□□ -1.46
NECAP1-223	ENST00000640091		A0A1B0GVX0	72 aa		5.9	□□□□□ -1.46
NECAP1-223	ENST00000640091	HCG22	E2RYF7	251 aa		5.89	□□□□□ -1.47
NECAP1-223	ENST00000640091	TMEM254	Q8TBM7	123 aa		5.89	□□□□□ -1.47
NECAP1-223	ENST00000640091	MMP24-AS1	A0A0U1RRL7	71 aa		5.87	□□□□□ -1.47
NECAP1-223	ENST00000640091	C8orf17	Q9NRJ1	99 aa		5.87	□□□□□ -1.47
NECAP1-223	ENST00000640091	CASC2	Q6XLA1	102 aa		5.86	□□□□□ -1.47
NECAP1-223	ENST00000640091		A0A0U1RQV1	116 aa		5.86	□□□□□ -1.47
NECAP1-223	ENST00000640091	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.86	□□□□□ -1.47
NECAP1-223	ENST00000640091	hDV103S1	A0JD37	113 aa		5.85	□□□□□ -1.47
NECAP1-223	ENST00000640091	OCR1	Q9BZK8	76 aa		5.84	□□□□□ -1.47
NECAP1-223	ENST00000640091	LINC00313	P59037	77 aa		5.84	□□□□□ -1.47
NECAP1-223	ENST00000640091	MPLKIP	Q8TAP9	179 aa		5.81	□□□□□ -1.48
NECAP1-223	ENST00000640091	C9orf92	A6NGG3	77 aa		5.8	□□□□□ -1.48
NECAP1-223	ENST00000640091		Q1T7F1	81 aa		5.8	□□□□□ -1.48
NECAP1-223	ENST00000640091	C8orf87	E5RJ46	101 aa		5.8	□□□□□ -1.48
NECAP1-223	ENST00000640091	MRPL34	Q9BQ48	92 aa	Known RBP	5.8	□□□□□ -1.48
NECAP1-223	ENST00000640091	LCE2B	O14633	110 aa		5.79	□□□□□ -1.48
NECAP1-223	ENST00000640091	NDUFS5	O43920	106 aa		5.79	□□□□□ -1.48
NECAP1-223	ENST00000640091	PMAIP1	Q13794	54 aa		5.79	□□□□□ -1.48
NECAP1-223	ENST00000640091	KRTAP16-1	A8MUX0	517 aa		5.77	□□□□□ -1.49
NECAP1-223	ENST00000640091	PCLO	Q9Y6V0	5065 aa		5.76	□□□□□ -1.49
NECAP1-223	ENST00000640091	IGLV7-46	A0A075B6I9	117 aa		5.75	□□□□□ -1.49
NECAP1-223	ENST00000640091	PRR4	Q16378	134 aa		5.75	□□□□□ -1.49
NECAP1-223	ENST00000640091	ZCCHC13	Q8WW36	166 aa	Known RBP	5.74	□□□□□ -1.49
NECAP1-223	ENST00000640091		Q8N9P0	234 aa	Predicted RBP	5.73	□□□□□ -1.49
NECAP1-223	ENST00000640091	C1orf64	Q8NEQ6	169 aa		5.72	□□□□□ -1.49
NECAP1-223	ENST00000640091	CYP4F30P	Q9H0H9	118 aa		5.71	□□□□□ -1.5
NECAP1-223	ENST00000640091		Q5W150	140 aa		5.71	□□□□□ -1.5
NECAP1-223	ENST00000640091	TP53AIP1	Q9HCN2	124 aa		5.7	□□□□□ -1.5
NECAP1-223	ENST00000640091	TRAV22	A0A0B4J277	110 aa		5.69	□□□□□ -1.5
NECAP1-223	ENST00000640091	KRTAP13-3	Q3SY46	172 aa		5.69	□□□□□ -1.5
NECAP1-223	ENST00000640091	LPA	P08519	4548 aa		5.68	□□□□□ -1.5
NECAP1-223	ENST00000640091		H0Y9P7	68 aa		5.68	□□□□□ -1.5
NECAP1-223	ENST00000640091	LINC00208	Q96KT6	92 aa		5.66	□□□□□ -1.5
NECAP1-223	ENST00000640091	MP68	P56378	58 aa		5.66	□□□□□ -1.5
NECAP1-223	ENST00000640091	C20orf166-AS1	Q96NR2	134 aa		5.66	□□□□□ -1.5
NECAP1-223	ENST00000640091		A8MUU9	505 aa		5.65	□□□□□ -1.5
NECAP1-223	ENST00000640091	XP32	Q5T750	250 aa		5.65	□□□□□ -1.51
NECAP1-223	ENST00000640091	HERC1	Q15751	4861 aa		5.64	□□□□□ -1.51
NECAP1-223	ENST00000640091	PSPHP1	O15172	72 aa		5.63	□□□□□ -1.51
NECAP1-223	ENST00000640091		Q5VV11	94 aa		5.63	□□□□□ -1.51
NECAP1-223	ENST00000640091	TPRXL	Q17RH7	258 aa		5.62	□□□□□ -1.51
NECAP1-223	ENST00000640091		Q75L30	129 aa		5.61	□□□□□ -1.51
NECAP1-223	ENST00000640091	LRP2	P98164	4655 aa		5.61	□□□□□ -1.51
NECAP1-223	ENST00000640091		A8MUN3	132 aa		5.6	□□□□□ -1.51
NECAP1-223	ENST00000640091	KTN1-AS1	Q86SY8	53 aa		5.6	□□□□□ -1.51
NECAP1-223	ENST00000640091		A8MU10	97 aa		5.59	□□□□□ -1.51
NECAP1-223	ENST00000640091	RPL37	P61927	97 aa	Known RBP	5.58	□□□□□ -1.52
NECAP1-223	ENST00000640091		H3BPC8	53 aa		5.57	□□□□□ -1.52
NECAP1-223	ENST00000640091	ATP11AUN	Q6ZP68	121 aa		5.57	□□□□□ -1.52
NECAP1-223	ENST00000640091	IGKV2D-30	A0A075B6S6	120 aa		5.57	□□□□□ -1.52
NECAP1-223	ENST00000640091	IGKV2-30	P06310	120 aa		5.57	□□□□□ -1.52
NECAP1-223	ENST00000640091	SPANXA2-OT1	Q8N9U9	137 aa		5.57	□□□□□ -1.52
NECAP1-223	ENST00000640091	PCOTH	Q58A44	107 aa		5.56	□□□□□ -1.52
NECAP1-223	ENST00000640091	LOC101927531	A0A1B0GV80	90 aa		5.55	□□□□□ -1.52
NECAP1-223	ENST00000640091	RBM12B-AS1	Q9P1G2	102 aa		5.55	□□□□□ -1.52
NECAP1-223	ENST00000640091		A6NN06	94 aa		5.53	□□□□□ -1.52
NECAP1-223	ENST00000640091	LCA10	Q71F78	164 aa		5.52	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms