RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RANBP2P49792 3224 aaKnown RBP1.38□□□□□ -2.19
RFC1-217ENST00000639695 PRUNE2Q8WUY3 3088 aa1.38□□□□□ -2.19
RFC1-217ENST00000639695 CFAP47Q6ZTR5 3102 aa1.38□□□□□ -2.19
RFC1-217ENST00000639695 OTOGQ6ZRI0 2925 aa1.38□□□□□ -2.19
RFC1-217ENST00000639695 CELSR2Q9HCU4 2923 aa1.38□□□□□ -2.19
RFC1-217ENST00000639695 AKAP9Q99996 3911 aa1.38□□□□□ -2.19
RFC1-217ENST00000639695 C2CD3Q4AC94 2353 aa1.37□□□□□ -2.19
RFC1-217ENST00000639695 GVINP1Q7Z2Y8 2422 aa1.37□□□□□ -2.19
RFC1-217ENST00000639695 MAP1AP78559 2803 aaPredicted RBP1.37□□□□□ -2.19
RFC1-217ENST00000639695 MKI67P46013 3256 aaKnown RBP1.37□□□□□ -2.19
RFC1-217ENST00000639695 F8P00451 2351 aa1.37□□□□□ -2.19
RFC1-217ENST00000639695 NCOR1O75376 2440 aa1.37□□□□□ -2.19
RFC1-217ENST00000639695 ABCA2Q9BZC7 2435 aa1.37□□□□□ -2.19
RFC1-217ENST00000639695 NCOR2Q9Y618 2525 aa1.36□□□□□ -2.19
RFC1-217ENST00000639695 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
RFC1-217ENST00000639695 FRYLO94915 3013 aa1.36□□□□□ -2.19
RFC1-217ENST00000639695 UBR5O95071 2799 aaPredicted RBP1.36□□□□□ -2.19
RFC1-217ENST00000639695 CCDC168Q8NDH2 2452 aa1.35□□□□□ -2.19
RFC1-217ENST00000639695 UNC80Q8N2C7 3258 aa1.35□□□□□ -2.19
RFC1-217ENST00000639695 DEFB4AO15263 64 aa1.35□□□□□ -2.19
RFC1-217ENST00000639695 WDFY4Q6ZS81 3184 aa1.35□□□□□ -2.19
RFC1-217ENST00000639695 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
RFC1-217ENST00000639695 BOD1L1Q8NFC6 3051 aa1.34□□□□□ -2.19
RFC1-217ENST00000639695 ANKHD1Q8IWZ3 2542 aaKnown RBP1.34□□□□□ -2.19
RFC1-217ENST00000639695 DCHS1Q96JQ0 3298 aa1.34□□□□□ -2.19
RFC1-217ENST00000639695 SPG11Q96JI7 2443 aa1.34□□□□□ -2.19
RFC1-217ENST00000639695 TNP1P09430 55 aa1.34□□□□□ -2.19
RFC1-217ENST00000639695 COL6A5A8TX70 2615 aa1.34□□□□□ -2.2
RFC1-217ENST00000639695 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
RFC1-217ENST00000639695 NBPF19A0A087WUL8 3843 aa1.33□□□□□ -2.2
RFC1-217ENST00000639695 DSPP15924 2871 aaKnown RBP1.33□□□□□ -2.2
RFC1-217ENST00000639695 SPEGQ15772 3267 aa1.32□□□□□ -2.2
RFC1-217ENST00000639695 NAV2Q8IVL1 2488 aa1.32□□□□□ -2.2
RFC1-217ENST00000639695 AKAP13Q12802 2813 aa1.32□□□□□ -2.2
RFC1-217ENST00000639695 KALRNO60229 2985 aa1.32□□□□□ -2.2
RFC1-217ENST00000639695 TRIOO75962 3097 aa1.31□□□□□ -2.2
RFC1-217ENST00000639695 VPS13DQ5THJ4 4388 aa1.31□□□□□ -2.2
RFC1-217ENST00000639695 BDP1A6H8Y1 2624 aa1.31□□□□□ -2.2
RFC1-217ENST00000639695 REV3LO60673 3130 aa1.31□□□□□ -2.2
RFC1-217ENST00000639695 DMDP11532 3685 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 PRRC2CQ9Y520 2896 aaKnown RBP1.3□□□□□ -2.2
RFC1-217ENST00000639695 C9orf92A6NGG3 77 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 VWFP04275 2813 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 CRYBG3Q68DQ2 2970 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 CEP290O15078 2479 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 ZFHX4Q86UP3 3567 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 TTC28Q96AY4 2481 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 CELSR1Q9NYQ6 3014 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 MEGF8Q7Z7M0 2845 aa1.3□□□□□ -2.2
RFC1-217ENST00000639695 USP34Q70CQ2 3546 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 TRANK1O15050 2925 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 DNAH12Q6ZR08 3092 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 HTTP42858 3142 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 PTPN13Q12923 2485 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
RFC1-217ENST00000639695 LAMA2P24043 3122 aaKnown RBP1.28□□□□□ -2.2
RFC1-217ENST00000639695 LRBAP50851 2863 aa1.28□□□□□ -2.2
RFC1-217ENST00000639695 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.21
RFC1-217ENST00000639695 EP400Q96L91 3159 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 DMXL1Q9Y485 3027 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 XIRP2A4UGR9 3374 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 FRYQ5TBA9 3013 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 APCP25054 2843 aa1.27□□□□□ -2.21
RFC1-217ENST00000639695 SRRM2Q9UQ35 2752 aaKnown RBP1.27□□□□□ -2.21
RFC1-217ENST00000639695 C5orf42Q9H799 3197 aa1.26□□□□□ -2.21
RFC1-217ENST00000639695 COL12A1Q99715 3063 aa1.26□□□□□ -2.21
RFC1-217ENST00000639695 TLN1Q9Y490 2541 aaKnown RBP1.26□□□□□ -2.21
RFC1-217ENST00000639695 PKD1L2Q7Z442 2459 aa1.26□□□□□ -2.21
RFC1-217ENST00000639695 SONP18583 2426 aaKnown RBP1.26□□□□□ -2.21
RFC1-217ENST00000639695 CHD9Q3L8U1 2897 aa1.26□□□□□ -2.21
RFC1-217ENST00000639695 FREM2Q5SZK8 3169 aa1.25□□□□□ -2.21
RFC1-217ENST00000639695 POLQO75417 2590 aa1.25□□□□□ -2.21
RFC1-217ENST00000639695 DNAH14Q0VDD8 3507 aa1.25□□□□□ -2.21
RFC1-217ENST00000639695 LAMA1P25391 3075 aa1.25□□□□□ -2.21
RFC1-217ENST00000639695 SPTAN1Q13813 2472 aaKnown RBP1.25□□□□□ -2.21
RFC1-217ENST00000639695 RIF1Q5UIP0 2472 aaKnown RBP1.25□□□□□ -2.21
RFC1-217ENST00000639695 CENPEQ02224 2701 aa1.24□□□□□ -2.21
RFC1-217ENST00000639695 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
RFC1-217ENST00000639695 DNAH11Q96DT5 4516 aa1.24□□□□□ -2.21
RFC1-217ENST00000639695 DOPEY1Q5JWR5 2465 aa1.24□□□□□ -2.21
RFC1-217ENST00000639695 SPENQ96T58 3664 aaKnown RBP1.24□□□□□ -2.21
RFC1-217ENST00000639695 WDFY3Q8IZQ1 3526 aa1.23□□□□□ -2.21
RFC1-217ENST00000639695 ATMQ13315 3056 aa1.23□□□□□ -2.21
RFC1-217ENST00000639695 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
RFC1-217ENST00000639695 PIEZO1Q92508 2521 aa1.23□□□□□ -2.21
RFC1-217ENST00000639695 TLN2Q9Y4G6 2542 aa1.22□□□□□ -2.21
RFC1-217ENST00000639695 BSNQ9UPA5 3926 aa1.22□□□□□ -2.21
RFC1-217ENST00000639695 DMXL2Q8TDJ6 3036 aa1.22□□□□□ -2.21
RFC1-217ENST00000639695 LRRK2Q5S007 2527 aa1.22□□□□□ -2.21
RFC1-217ENST00000639695 SETD2Q9BYW2 2564 aaPredicted RBP1.21□□□□□ -2.22
RFC1-217ENST00000639695 UTP20O75691 2785 aaKnown RBP1.21□□□□□ -2.22
RFC1-217ENST00000639695 LOC400499M0QZD8 3231 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 NF1P21359 2839 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
RFC1-217ENST00000639695 CSMD1Q96PZ7 3565 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
RFC1-217ENST00000639695 USP9XQ93008 2570 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms