RNA–Protein interactions for RNA: ENST00000639548.1

PAX6-258, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-258ENST00000639548 C5orf47Q569G3 176 aa7.11□□□□□ -1.27
PAX6-258ENST00000639548 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
PAX6-258ENST00000639548 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
PAX6-258ENST00000639548 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
PAX6-258ENST00000639548 MMP24-AS1A0A0U1RRL7 71 aa7.1□□□□□ -1.27
PAX6-258ENST00000639548 HERC1Q15751 4861 aa7.1□□□□□ -1.27
PAX6-258ENST00000639548 A0A1B0GVX0 72 aa7.1□□□□□ -1.27
PAX6-258ENST00000639548 H7BZZ5 65 aa7.09□□□□□ -1.28
PAX6-258ENST00000639548 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.28
PAX6-258ENST00000639548 FLG2Q5D862 2391 aaPredicted RBP7.08□□□□□ -1.28
PAX6-258ENST00000639548 SVIPQ8NHG7 77 aa7.08□□□□□ -1.28
PAX6-258ENST00000639548 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
PAX6-258ENST00000639548 MYCBP2O75592 4640 aa7.07□□□□□ -1.28
PAX6-258ENST00000639548 VPS13BQ7Z7G8 4022 aa7.07□□□□□ -1.28
PAX6-258ENST00000639548 hDV103S1A0JD37 113 aa7.06□□□□□ -1.28
PAX6-258ENST00000639548 H3BPC8 53 aa7.06□□□□□ -1.28
PAX6-258ENST00000639548 LIMD2Q9BT23 127 aa7.06□□□□□ -1.28
PAX6-258ENST00000639548 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
PAX6-258ENST00000639548 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
PAX6-258ENST00000639548 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
PAX6-258ENST00000639548 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
PAX6-258ENST00000639548 ZCCHC13Q8WW36 166 aaKnown RBP7.04□□□□□ -1.28
PAX6-258ENST00000639548 TP53AIP1Q9HCN2 124 aa7.04□□□□□ -1.28
PAX6-258ENST00000639548 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
PAX6-258ENST00000639548 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
PAX6-258ENST00000639548 Q5VSD8 79 aa7.03□□□□□ -1.28
PAX6-258ENST00000639548 C8orf87E5RJ46 101 aa7.02□□□□□ -1.29
PAX6-258ENST00000639548 LCE2BO14633 110 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 SPINK1P00995 79 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 TYMSOSQ8TAI1 123 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 MP68P56378 58 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
PAX6-258ENST00000639548 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
PAX6-258ENST00000639548 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
PAX6-258ENST00000639548 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
PAX6-258ENST00000639548 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
PAX6-258ENST00000639548 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
PAX6-258ENST00000639548 TRAV22A0A0B4J277 110 aa6.96□□□□□ -1.3
PAX6-258ENST00000639548 H0Y9P7 68 aa6.95□□□□□ -1.3
PAX6-258ENST00000639548 LINC00304Q8N9R0 145 aa6.94□□□□□ -1.3
PAX6-258ENST00000639548 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
PAX6-258ENST00000639548 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
PAX6-258ENST00000639548 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
PAX6-258ENST00000639548 LINC00313P59037 77 aa6.92□□□□□ -1.3
PAX6-258ENST00000639548 LINC00208Q96KT6 92 aa6.92□□□□□ -1.3
PAX6-258ENST00000639548 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.31
PAX6-258ENST00000639548 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.31
PAX6-258ENST00000639548 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
PAX6-258ENST00000639548 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
PAX6-258ENST00000639548 J3QL48 77 aa6.88□□□□□ -1.31
PAX6-258ENST00000639548 NDUFS5O43920 106 aa6.87□□□□□ -1.31
PAX6-258ENST00000639548 CYP4F30PQ9H0H9 118 aa6.87□□□□□ -1.31
PAX6-258ENST00000639548 KRTAP16-1A8MUX0 517 aa6.86□□□□□ -1.31
PAX6-258ENST00000639548 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
PAX6-258ENST00000639548 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
PAX6-258ENST00000639548 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
PAX6-258ENST00000639548 PKHD1L1Q86WI1 4243 aa6.82□□□□□ -1.32
PAX6-258ENST00000639548 OXTP01178 125 aa6.82□□□□□ -1.32
PAX6-258ENST00000639548 Q5W150 140 aa6.79□□□□□ -1.32
PAX6-258ENST00000639548 IGLV7-46A0A075B6I9 117 aa6.78□□□□□ -1.32
PAX6-258ENST00000639548 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
PAX6-258ENST00000639548 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
PAX6-258ENST00000639548 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
PAX6-258ENST00000639548 IGKV2-30P06310 120 aa6.71□□□□□ -1.34
PAX6-258ENST00000639548 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
PAX6-258ENST00000639548 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
PAX6-258ENST00000639548 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
PAX6-258ENST00000639548 A8MUU9 505 aa6.68□□□□□ -1.34
PAX6-258ENST00000639548 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
PAX6-258ENST00000639548 PRR4Q16378 134 aa6.67□□□□□ -1.34
PAX6-258ENST00000639548 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
PAX6-258ENST00000639548 TNXBP22105 4242 aa6.66□□□□□ -1.34
PAX6-258ENST00000639548 HRES1P13985 223 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 Q1T7F1 81 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 Q75L30 129 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 COA5Q86WW8 74 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
PAX6-258ENST00000639548 C7orf65Q6ZTY9 151 aa6.6□□□□□ -1.35
PAX6-258ENST00000639548 C9orf92A6NGG3 77 aa6.59□□□□□ -1.35
PAX6-258ENST00000639548 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
PAX6-258ENST00000639548 V9GYY9 64 aa6.59□□□□□ -1.35
PAX6-258ENST00000639548 ACYP2P14621 99 aa6.59□□□□□ -1.36
PAX6-258ENST00000639548 LRP2P98164 4655 aa6.58□□□□□ -1.36
PAX6-258ENST00000639548 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
PAX6-258ENST00000639548 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
PAX6-258ENST00000639548 C4orf26Q17RF5 130 aa6.56□□□□□ -1.36
PAX6-258ENST00000639548 A8MUN3 132 aa6.52□□□□□ -1.37
PAX6-258ENST00000639548 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
PAX6-258ENST00000639548 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
PAX6-258ENST00000639548 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
PAX6-258ENST00000639548 LINC01558Q9Y6Z2 57 aa6.46□□□□□ -1.38
PAX6-258ENST00000639548 SPINK7P58062 85 aa6.45□□□□□ -1.38
PAX6-258ENST00000639548 XP32Q5T750 250 aa6.45□□□□□ -1.38
PAX6-258ENST00000639548 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
PAX6-258ENST00000639548 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
PAX6-258ENST00000639548 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms