RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 OTOGQ6ZRI0 2925 aa8.59□□□□□ -1.03
SCARB2-216ENST00000639300 Q5W150 140 aa8.58□□□□□ -1.04
SCARB2-216ENST00000639300 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
SCARB2-216ENST00000639300 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
SCARB2-216ENST00000639300 A0A0D9SG42 100 aa8.55□□□□□ -1.04
SCARB2-216ENST00000639300 Q6ZR54 194 aa8.55□□□□□ -1.04
SCARB2-216ENST00000639300 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
SCARB2-216ENST00000639300 A0A087X002 238 aa8.53□□□□□ -1.04
SCARB2-216ENST00000639300 Q5VV11 94 aa8.53□□□□□ -1.04
SCARB2-216ENST00000639300 NOTCH2NLQ7Z3S9 236 aa8.53□□□□□ -1.04
SCARB2-216ENST00000639300 ZFHX3Q15911 3703 aa8.52□□□□□ -1.04
SCARB2-216ENST00000639300 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
SCARB2-216ENST00000639300 Q75L30 129 aa8.52□□□□□ -1.05
SCARB2-216ENST00000639300 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
SCARB2-216ENST00000639300 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
SCARB2-216ENST00000639300 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
SCARB2-216ENST00000639300 CSMD2Q7Z408 3487 aa8.5□□□□□ -1.05
SCARB2-216ENST00000639300 LINC01554Q52M75 96 aa8.47□□□□□ -1.05
SCARB2-216ENST00000639300 SPINK7P58062 85 aa8.47□□□□□ -1.05
SCARB2-216ENST00000639300 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
SCARB2-216ENST00000639300 LCA10Q71F78 164 aa8.44□□□□□ -1.06
SCARB2-216ENST00000639300 NBPF19A0A087WUL8 3843 aa8.44□□□□□ -1.06
SCARB2-216ENST00000639300 A0A1B0GU33 70 aa8.44□□□□□ -1.06
SCARB2-216ENST00000639300 RBM12B-AS1Q9P1G2 102 aa8.44□□□□□ -1.06
SCARB2-216ENST00000639300 TGP01266 2768 aa8.44□□□□□ -1.06
SCARB2-216ENST00000639300 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
SCARB2-216ENST00000639300 CRIPTQ9P021 101 aa8.4□□□□□ -1.07
SCARB2-216ENST00000639300 Q6ZSA8 131 aa8.39□□□□□ -1.07
SCARB2-216ENST00000639300 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
SCARB2-216ENST00000639300 LCE6AA0A183 80 aa8.36□□□□□ -1.07
SCARB2-216ENST00000639300 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
SCARB2-216ENST00000639300 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
SCARB2-216ENST00000639300 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
SCARB2-216ENST00000639300 Q5VSD8 79 aa8.29□□□□□ -1.08
SCARB2-216ENST00000639300 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
SCARB2-216ENST00000639300 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
SCARB2-216ENST00000639300 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
SCARB2-216ENST00000639300 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
SCARB2-216ENST00000639300 S4R3F8 94 aa8.19□□□□□ -1.1
SCARB2-216ENST00000639300 A8MU10 97 aa8.16□□□□□ -1.1
SCARB2-216ENST00000639300 BSNQ9UPA5 3926 aa8.14□□□□□ -1.11
SCARB2-216ENST00000639300 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
SCARB2-216ENST00000639300 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
SCARB2-216ENST00000639300 H1FX-AS1Q4G0G2 97 aa8.07□□□□□ -1.12
SCARB2-216ENST00000639300 R4GN34 69 aa8.05□□□□□ -1.12
SCARB2-216ENST00000639300 RPL37P61927 97 aaKnown RBP8.05□□□□□ -1.12
SCARB2-216ENST00000639300 TRRAPQ9Y4A5 3859 aa8.03□□□□□ -1.12
SCARB2-216ENST00000639300 FBN3Q75N90 2809 aa8.02□□□□□ -1.12
SCARB2-216ENST00000639300 M0R2T5 61 aa8.01□□□□□ -1.13
SCARB2-216ENST00000639300 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
SCARB2-216ENST00000639300 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
SCARB2-216ENST00000639300 KRTAP1-4P0C5Y4 121 aa7.95□□□□□ -1.14
SCARB2-216ENST00000639300 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
SCARB2-216ENST00000639300 A6NN06 94 aa7.93□□□□□ -1.14
SCARB2-216ENST00000639300 M0QZ58 72 aa7.93□□□□□ -1.14
SCARB2-216ENST00000639300 H3BS24 57 aa7.93□□□□□ -1.14
SCARB2-216ENST00000639300 ROMO1P60602 79 aa7.91□□□□□ -1.14
SCARB2-216ENST00000639300 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
SCARB2-216ENST00000639300 A8MUU9 505 aa7.85□□□□□ -1.15
SCARB2-216ENST00000639300 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
SCARB2-216ENST00000639300 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
SCARB2-216ENST00000639300 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
SCARB2-216ENST00000639300 KRTAP21-3Q3LHN1 58 aa7.79□□□□□ -1.16
SCARB2-216ENST00000639300 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
SCARB2-216ENST00000639300 ANK3Q12955 4377 aaKnown RBP7.74□□□□□ -1.17
SCARB2-216ENST00000639300 KRTAP16-1A8MUX0 517 aa7.73□□□□□ -1.17
SCARB2-216ENST00000639300 KRTAP25-1Q3LHN0 102 aa7.67□□□□□ -1.18
SCARB2-216ENST00000639300 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.19
SCARB2-216ENST00000639300 XP32Q5T750 250 aa7.64□□□□□ -1.19
SCARB2-216ENST00000639300 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
SCARB2-216ENST00000639300 H0YAA0 97 aa7.56□□□□□ -1.2
SCARB2-216ENST00000639300 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
SCARB2-216ENST00000639300 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
SCARB2-216ENST00000639300 A0A0A0MQY5 61 aa7.44□□□□□ -1.22
SCARB2-216ENST00000639300 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
SCARB2-216ENST00000639300 P0C880 135 aa7.43□□□□□ -1.22
SCARB2-216ENST00000639300 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
SCARB2-216ENST00000639300 KRTAP10-8P60410 259 aa7.4□□□□□ -1.22
SCARB2-216ENST00000639300 TPRXLQ17RH7 258 aa7.38□□□□□ -1.23
SCARB2-216ENST00000639300 NDUFAF8A1L188 74 aa7.35□□□□□ -1.23
SCARB2-216ENST00000639300 TNP1P09430 55 aa7.26□□□□□ -1.25
SCARB2-216ENST00000639300 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
SCARB2-216ENST00000639300 AKAP9Q99996 3911 aa7.24□□□□□ -1.25
SCARB2-216ENST00000639300 HUWE1Q7Z6Z7 4374 aaKnown RBP7.12□□□□□ -1.27
SCARB2-216ENST00000639300 KRTAP12-2P59991 146 aa7.08□□□□□ -1.28
SCARB2-216ENST00000639300 KRTAP10-10P60014 251 aa7.05□□□□□ -1.28
SCARB2-216ENST00000639300 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
SCARB2-216ENST00000639300 DNHD1Q96M86 4753 aa7.02□□□□□ -1.29
SCARB2-216ENST00000639300 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
SCARB2-216ENST00000639300 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
SCARB2-216ENST00000639300 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
SCARB2-216ENST00000639300 MT1HL1P0DM35 61 aa6.93□□□□□ -1.3
SCARB2-216ENST00000639300 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-216ENST00000639300 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
SCARB2-216ENST00000639300 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
SCARB2-216ENST00000639300 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
SCARB2-216ENST00000639300 DNAH11Q96DT5 4516 aa6.8□□□□□ -1.32
SCARB2-216ENST00000639300 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
SCARB2-216ENST00000639300 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
SCARB2-216ENST00000639300 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms