RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ACBD7Q8N6N7 88 aa-5.73□□□□□ -3.33
LMBR1-222ENST00000638959 PYDC1Q8WXC3 89 aa-5.73□□□□□ -3.33
LMBR1-222ENST00000638959 IER3IP1Q9Y5U9 82 aa-5.74□□□□□ -3.33
LMBR1-222ENST00000638959 ABCA3Q99758 1704 aa-5.74□□□□□ -3.33
LMBR1-222ENST00000638959 DIP2BQ9P265 1576 aa-5.75□□□□□ -3.33
LMBR1-222ENST00000638959 MYOM2P54296 1465 aa-5.75□□□□□ -3.33
LMBR1-222ENST00000638959 SFTA3P0C7M3 94 aa-5.75□□□□□ -3.33
LMBR1-222ENST00000638959 NDUFB1O75438 58 aa-5.76□□□□□ -3.33
LMBR1-222ENST00000638959 IFI27P40305 119 aaPredicted RBP-5.76□□□□□ -3.33
LMBR1-222ENST00000638959 ROCK2O75116 1388 aaKnown RBP-5.77□□□□□ -3.33
LMBR1-222ENST00000638959 NDUFA4O00483 81 aa-5.78□□□□□ -3.33
LMBR1-222ENST00000638959 RPL13AP3Q6NVV1 102 aa-5.78□□□□□ -3.33
LMBR1-222ENST00000638959 C20orf78Q9BR46 151 aa-5.78□□□□□ -3.33
LMBR1-222ENST00000638959 SZT2Q5T011 3432 aa-5.78□□□□□ -3.33
LMBR1-222ENST00000638959 NRKQ7Z2Y5 1582 aa-5.79□□□□□ -3.34
LMBR1-222ENST00000638959 UQCRHLA0A096LP55 91 aa-5.8□□□□□ -3.34
LMBR1-222ENST00000638959 MRPL33O75394 65 aaKnown RBP-5.81□□□□□ -3.34
LMBR1-222ENST00000638959 NCBP2-AS2Q69YL0 99 aa-5.81□□□□□ -3.34
LMBR1-222ENST00000638959 ATOX1O00244 68 aa-5.83□□□□□ -3.34
LMBR1-222ENST00000638959 FCER1GP30273 86 aa-5.83□□□□□ -3.34
LMBR1-222ENST00000638959 PMCHL2Q9BQD1 86 aa-5.83□□□□□ -3.34
LMBR1-222ENST00000638959 HMGN2P05204 90 aaKnown RBP-5.84□□□□□ -3.34
LMBR1-222ENST00000638959 CRIP1P50238 77 aa-5.84□□□□□ -3.34
LMBR1-222ENST00000638959 CD163L1Q9NR16 1453 aa-5.84□□□□□ -3.34
LMBR1-222ENST00000638959 C6orf48Q9UBA6 75 aa-5.85□□□□□ -3.35
LMBR1-222ENST00000638959 MED14O60244 1454 aa-5.85□□□□□ -3.35
LMBR1-222ENST00000638959 NCOA2Q15596 1464 aa-5.85□□□□□ -3.35
LMBR1-222ENST00000638959 MRPS10P82664 201 aaKnown RBP-5.86□□□□□ -3.35
LMBR1-222ENST00000638959 CLTCQ00610 1675 aaKnown RBP-5.87□□□□□ -3.35
LMBR1-222ENST00000638959 PPP3R1P63098 170 aa-5.87□□□□□ -3.35
LMBR1-222ENST00000638959 PPLO60437 1756 aa-5.88□□□□□ -3.35
LMBR1-222ENST00000638959 ARFGEF2Q9Y6D5 1785 aa-5.88□□□□□ -3.35
LMBR1-222ENST00000638959 COL5A1-AS1Q5SY13 56 aa-5.89□□□□□ -3.35
LMBR1-222ENST00000638959 UMAD1C9J7I0 102 aa-5.9□□□□□ -3.35
LMBR1-222ENST00000638959 MUC3AQ02505 3323 aa-5.9□□□□□ -3.35
LMBR1-222ENST00000638959 NRAPQ86VF7 1730 aa-5.91□□□□□ -3.35
LMBR1-222ENST00000638959 WDFY4Q6ZS81 3184 aa-5.91□□□□□ -3.36
LMBR1-222ENST00000638959 KIF21BO75037 1637 aa-5.92□□□□□ -3.36
LMBR1-222ENST00000638959 LINC00032P0C843 101 aa-5.92□□□□□ -3.36
LMBR1-222ENST00000638959 GNG4P50150 75 aa-5.92□□□□□ -3.36
LMBR1-222ENST00000638959 EP400Q96L91 3159 aa-5.92□□□□□ -3.36
LMBR1-222ENST00000638959 PZPP20742 1482 aa-5.93□□□□□ -3.36
LMBR1-222ENST00000638959 TJP1Q07157 1748 aa-5.94□□□□□ -3.36
LMBR1-222ENST00000638959 FAUP35544 74 aaKnown RBP-5.94□□□□□ -3.36
LMBR1-222ENST00000638959 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-5.94□□□□□ -3.36
LMBR1-222ENST00000638959 CROCC2H7BZ55 1655 aa-5.94□□□□□ -3.36
LMBR1-222ENST00000638959 CCDC88BA6NC98 1476 aa-5.95□□□□□ -3.36
LMBR1-222ENST00000638959 SARNPP82979 210 aaKnown RBP-5.95□□□□□ -3.36
LMBR1-222ENST00000638959 MAP3K4Q9Y6R4 1608 aa-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 NALCNQ8IZF0 1738 aa-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 DPY30Q9C005 99 aa-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 EPRSP07814 1512 aaKnown RBP-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 PIK3C2BO00750 1634 aa-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 UBR1Q8IWV7 1749 aa-5.96□□□□□ -3.36
LMBR1-222ENST00000638959 SMIM11AP58511 58 aa-5.98□□□□□ -3.37
LMBR1-222ENST00000638959 NEXMIFQ5QGS0 1516 aa-5.99□□□□□ -3.37
LMBR1-222ENST00000638959 PEA15Q15121 130 aa-6□□□□□ -3.37
LMBR1-222ENST00000638959 DCHS1Q96JQ0 3298 aa-6.02□□□□□ -3.37
LMBR1-222ENST00000638959 MYMXA0A1B0GTQ4 84 aa-6.02□□□□□ -3.37
LMBR1-222ENST00000638959 FANCAO15360 1455 aa-6.02□□□□□ -3.37
LMBR1-222ENST00000638959 URB2Q14146 1524 aaKnown RBP-6.03□□□□□ -3.37
LMBR1-222ENST00000638959 RICTORQ6R327 1708 aa-6.04□□□□□ -3.38
LMBR1-222ENST00000638959 UBL5Q9BZL1 73 aa-6.04□□□□□ -3.38
LMBR1-222ENST00000638959 KCNQ1DNQ9H478 68 aa-6.04□□□□□ -3.38
LMBR1-222ENST00000638959 INO80Q9ULG1 1556 aaPredicted RBP-6.05□□□□□ -3.38
LMBR1-222ENST00000638959 GTF2H5Q6ZYL4 71 aa-6.05□□□□□ -3.38
LMBR1-222ENST00000638959 RNF17Q9BXT8 1623 aaKnown RBP-6.06□□□□□ -3.38
LMBR1-222ENST00000638959 NDUFA2O43678 99 aa-6.06□□□□□ -3.38
LMBR1-222ENST00000638959 S100A1P23297 94 aa-6.06□□□□□ -3.38
LMBR1-222ENST00000638959 NREPQ16612 68 aa-6.06□□□□□ -3.38
LMBR1-222ENST00000638959 TMEM203Q969S6 136 aa-6.06□□□□□ -3.38
LMBR1-222ENST00000638959 ARHGAP35Q9NRY4 1499 aa-6.07□□□□□ -3.38
LMBR1-222ENST00000638959 HFM1A2PYH4 1435 aa-6.08□□□□□ -3.38
LMBR1-222ENST00000638959 CEBPZOSA8MTT3 80 aa-6.09□□□□□ -3.38
LMBR1-222ENST00000638959 CORTO00230 105 aa-6.09□□□□□ -3.38
LMBR1-222ENST00000638959 KIF14Q15058 1648 aa-6.1□□□□□ -3.39
LMBR1-222ENST00000638959 PREX2Q70Z35 1606 aa-6.1□□□□□ -3.39
LMBR1-222ENST00000638959 DNAH14Q0VDD8 3507 aa-6.11□□□□□ -3.39
LMBR1-222ENST00000638959 HMGA1P17096 107 aaKnown RBP-6.12□□□□□ -3.39
LMBR1-222ENST00000638959 S100A8P05109 93 aa-6.13□□□□□ -3.39
LMBR1-222ENST00000638959 ZFYVE16Q7Z3T8 1539 aa-6.15□□□□□ -3.39
LMBR1-222ENST00000638959 CEP250Q9BV73 2442 aa-6.16□□□□□ -3.4
LMBR1-222ENST00000638959 RABAC1Q9UI14 185 aa-6.16□□□□□ -3.4
LMBR1-222ENST00000638959 ASXL1Q8IXJ9 1541 aa-6.16□□□□□ -3.4
LMBR1-222ENST00000638959 MYO5CQ9NQX4 1742 aa-6.16□□□□□ -3.4
LMBR1-222ENST00000638959 MYO3AQ8NEV4 1616 aa-6.17□□□□□ -3.4
LMBR1-222ENST00000638959 TSC22D3Q99576 134 aa-6.17□□□□□ -3.4
LMBR1-222ENST00000638959 DLEU1O43261 78 aa-6.18□□□□□ -3.4
LMBR1-222ENST00000638959 RBP2P50120 134 aa-6.2□□□□□ -3.4
LMBR1-222ENST00000638959 ABRACLQ9P1F3 81 aa-6.2□□□□□ -3.4
LMBR1-222ENST00000638959 KAAG1Q9UBP8 84 aa-6.2□□□□□ -3.4
LMBR1-222ENST00000638959 ETDCA0A1B0GVM5 59 aa-6.21□□□□□ -3.4
LMBR1-222ENST00000638959 MKI67P46013 3256 aaKnown RBP-6.22□□□□□ -3.41
LMBR1-222ENST00000638959 RALGAPBQ86X10 1494 aa-6.22□□□□□ -3.41
LMBR1-222ENST00000638959 CFAP43Q8NDM7 1665 aa-6.23□□□□□ -3.41
LMBR1-222ENST00000638959 FAM208AQ9UK61 1670 aaKnown RBP-6.23□□□□□ -3.41
LMBR1-222ENST00000638959 CLASP1Q7Z460 1538 aa-6.27□□□□□ -3.41
LMBR1-222ENST00000638959 A0A1B0GV90 55 aa-6.28□□□□□ -3.41
LMBR1-222ENST00000638959 LOC105371267A0A1B0GV96 52 aa-6.29□□□□□ -3.42
LMBR1-222ENST00000638959 EEA1Q15075 1411 aa-6.29□□□□□ -3.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms