RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HRES1P13985 223 aa6.5□□□□□ -1.37
SNIP1-204ENST00000638725 IGLV5-52A0A0A0MRZ9 124 aa6.49□□□□□ -1.37
SNIP1-204ENST00000638725 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
SNIP1-204ENST00000638725 A0A087WTM6 91 aa6.47□□□□□ -1.37
SNIP1-204ENST00000638725 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
SNIP1-204ENST00000638725 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
SNIP1-204ENST00000638725 PLAC8Q9NZF1 115 aa6.47□□□□□ -1.37
SNIP1-204ENST00000638725 NUPR2A6NF83 97 aa6.46□□□□□ -1.38
SNIP1-204ENST00000638725 RTL8CO15255 209 aa6.46□□□□□ -1.38
SNIP1-204ENST00000638725 ZNF861PO60384 105 aa6.46□□□□□ -1.38
SNIP1-204ENST00000638725 Q5W150 140 aa6.45□□□□□ -1.38
SNIP1-204ENST00000638725 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
SNIP1-204ENST00000638725 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
SNIP1-204ENST00000638725 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
SNIP1-204ENST00000638725 STARD9Q9P2P6 4700 aa6.43□□□□□ -1.38
SNIP1-204ENST00000638725 SPINK7P58062 85 aa6.42□□□□□ -1.38
SNIP1-204ENST00000638725 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
SNIP1-204ENST00000638725 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
SNIP1-204ENST00000638725 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
SNIP1-204ENST00000638725 A6NN06 94 aa6.4□□□□□ -1.38
SNIP1-204ENST00000638725 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.38
SNIP1-204ENST00000638725 DNAH17Q9UFH2 4485 aa6.4□□□□□ -1.38
SNIP1-204ENST00000638725 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
SNIP1-204ENST00000638725 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
SNIP1-204ENST00000638725 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
SNIP1-204ENST00000638725 DNAH2Q9P225 4427 aa6.36□□□□□ -1.39
SNIP1-204ENST00000638725 ACYP2P14621 99 aa6.34□□□□□ -1.4
SNIP1-204ENST00000638725 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.4
SNIP1-204ENST00000638725 KMT2AQ03164 3969 aa6.34□□□□□ -1.4
SNIP1-204ENST00000638725 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
SNIP1-204ENST00000638725 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
SNIP1-204ENST00000638725 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
SNIP1-204ENST00000638725 SSBP3-AS1Q7Z2R9 100 aa6.3□□□□□ -1.4
SNIP1-204ENST00000638725 DMAC1Q96GE9 116 aa6.3□□□□□ -1.4
SNIP1-204ENST00000638725 LINC00313P59037 77 aa6.29□□□□□ -1.4
SNIP1-204ENST00000638725 FBN3Q75N90 2809 aa6.29□□□□□ -1.4
SNIP1-204ENST00000638725 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
SNIP1-204ENST00000638725 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
SNIP1-204ENST00000638725 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
SNIP1-204ENST00000638725 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
SNIP1-204ENST00000638725 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
SNIP1-204ENST00000638725 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
SNIP1-204ENST00000638725 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
SNIP1-204ENST00000638725 TGP01266 2768 aa6.24□□□□□ -1.41
SNIP1-204ENST00000638725 A0A1B0GU69 56 aa6.23□□□□□ -1.41
SNIP1-204ENST00000638725 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
SNIP1-204ENST00000638725 DNAH6Q9C0G6 4158 aa6.23□□□□□ -1.41
SNIP1-204ENST00000638725 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
SNIP1-204ENST00000638725 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
SNIP1-204ENST00000638725 LY6G6CO95867 125 aa6.2□□□□□ -1.42
SNIP1-204ENST00000638725 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
SNIP1-204ENST00000638725 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
SNIP1-204ENST00000638725 PRAC1Q96KF2 57 aa6.17□□□□□ -1.42
SNIP1-204ENST00000638725 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
SNIP1-204ENST00000638725 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
SNIP1-204ENST00000638725 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
SNIP1-204ENST00000638725 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
SNIP1-204ENST00000638725 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
SNIP1-204ENST00000638725 UQCR11O14957 56 aa6.12□□□□□ -1.43
SNIP1-204ENST00000638725 Q6ZSA8 131 aa6.11□□□□□ -1.43
SNIP1-204ENST00000638725 PLA2G1BP04054 148 aaKnown RBP6.1□□□□□ -1.43
SNIP1-204ENST00000638725 SPINK1P00995 79 aa6.08□□□□□ -1.44
SNIP1-204ENST00000638725 C4orf48Q5BLP8 95 aa6.07□□□□□ -1.44
SNIP1-204ENST00000638725 Q8N1X5 172 aa6.06□□□□□ -1.44
SNIP1-204ENST00000638725 TYMSOSQ8TAI1 123 aa6.06□□□□□ -1.44
SNIP1-204ENST00000638725 HYDINQ4G0P3 5121 aa6.05□□□□□ -1.44
SNIP1-204ENST00000638725 PKD1P98161 4303 aa6.05□□□□□ -1.44
SNIP1-204ENST00000638725 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
SNIP1-204ENST00000638725 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
SNIP1-204ENST00000638725 FAT2Q9NYQ8 4349 aa6.02□□□□□ -1.45
SNIP1-204ENST00000638725 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
SNIP1-204ENST00000638725 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
SNIP1-204ENST00000638725 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
SNIP1-204ENST00000638725 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
SNIP1-204ENST00000638725 H0YAA0 97 aa5.92□□□□□ -1.46
SNIP1-204ENST00000638725 RPS29P62273 56 aaKnown RBP5.91□□□□□ -1.46
SNIP1-204ENST00000638725 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.46
SNIP1-204ENST00000638725 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.47
SNIP1-204ENST00000638725 A8MUU9 505 aa5.88□□□□□ -1.47
SNIP1-204ENST00000638725 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
SNIP1-204ENST00000638725 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
SNIP1-204ENST00000638725 H3BS24 57 aa5.87□□□□□ -1.47
SNIP1-204ENST00000638725 PKHD1P08F94 4074 aa5.86□□□□□ -1.47
SNIP1-204ENST00000638725 A0A1B0GU33 70 aa5.85□□□□□ -1.47
SNIP1-204ENST00000638725 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
SNIP1-204ENST00000638725 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
SNIP1-204ENST00000638725 FAT1Q14517 4588 aa5.82□□□□□ -1.48
SNIP1-204ENST00000638725 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
SNIP1-204ENST00000638725 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
SNIP1-204ENST00000638725 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
SNIP1-204ENST00000638725 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
SNIP1-204ENST00000638725 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
SNIP1-204ENST00000638725 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
SNIP1-204ENST00000638725 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
SNIP1-204ENST00000638725 A0A1B0GVY2 172 aa5.67□□□□□ -1.5
SNIP1-204ENST00000638725 K7ERS5 55 aa5.67□□□□□ -1.5
SNIP1-204ENST00000638725 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
SNIP1-204ENST00000638725 KRTAP3-3Q9BYR6 98 aa5.64□□□□□ -1.51
SNIP1-204ENST00000638725 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
SNIP1-204ENST00000638725 ROMO1P60602 79 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms