RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
GFAP-227ENST00000638400 H7BZZ5 65 aa7.4□□□□□ -1.22
GFAP-227ENST00000638400 DEFB105AQ8NG35 78 aa7.4□□□□□ -1.22
GFAP-227ENST00000638400 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
GFAP-227ENST00000638400 F8WEM9 126 aa7.39□□□□□ -1.23
GFAP-227ENST00000638400 ANAPC11Q9NYG5 84 aa7.39□□□□□ -1.23
GFAP-227ENST00000638400 HIGD2AQ9BW72 106 aa7.38□□□□□ -1.23
GFAP-227ENST00000638400 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
GFAP-227ENST00000638400 SERP1Q9Y6X1 66 aa7.37□□□□□ -1.23
GFAP-227ENST00000638400 SPRR1BP22528 89 aa7.36□□□□□ -1.23
GFAP-227ENST00000638400 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
GFAP-227ENST00000638400 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
GFAP-227ENST00000638400 ST20-AS1Q8NBB2 130 aa7.36□□□□□ -1.23
GFAP-227ENST00000638400 RNF213Q63HN8 5207 aa7.35□□□□□ -1.23
GFAP-227ENST00000638400 PRR4Q16378 134 aa7.34□□□□□ -1.23
GFAP-227ENST00000638400 TMEM254Q8TBM7 123 aa7.34□□□□□ -1.23
GFAP-227ENST00000638400 ZNF706Q9Y5V0 76 aaPredicted RBP7.34□□□□□ -1.23
GFAP-227ENST00000638400 A0A0U1RQV1 116 aa7.32□□□□□ -1.24
GFAP-227ENST00000638400 LINC00304Q8N9R0 145 aa7.32□□□□□ -1.24
GFAP-227ENST00000638400 LPAP08519 4548 aa7.3□□□□□ -1.24
GFAP-227ENST00000638400 IGFL1Q6UW32 110 aa7.29□□□□□ -1.24
GFAP-227ENST00000638400 DSCR10P59022 87 aa7.28□□□□□ -1.24
GFAP-227ENST00000638400 Q8N9L7 120 aa7.28□□□□□ -1.24
GFAP-227ENST00000638400 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
GFAP-227ENST00000638400 LOC100996750A0A140TA64 210 aa7.26□□□□□ -1.25
GFAP-227ENST00000638400 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
GFAP-227ENST00000638400 HCG22E2RYF7 251 aa7.25□□□□□ -1.25
GFAP-227ENST00000638400 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
GFAP-227ENST00000638400 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
GFAP-227ENST00000638400 SPAG11AQ6PDA7 123 aa7.24□□□□□ -1.25
GFAP-227ENST00000638400 SMIM26A0A096LP01 95 aa7.23□□□□□ -1.25
GFAP-227ENST00000638400 K7EQZ3 153 aa7.23□□□□□ -1.25
GFAP-227ENST00000638400 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
GFAP-227ENST00000638400 Q5XG85 94 aa7.21□□□□□ -1.26
GFAP-227ENST00000638400 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
GFAP-227ENST00000638400 H3BPC8 53 aa7.2□□□□□ -1.26
GFAP-227ENST00000638400 A0A087WSZ3 146 aa7.19□□□□□ -1.26
GFAP-227ENST00000638400 IGLV9-49A0A0B4J1Y8 123 aa7.18□□□□□ -1.26
GFAP-227ENST00000638400 NDUFB1O75438 58 aa7.18□□□□□ -1.26
GFAP-227ENST00000638400 MOBPQ13875 183 aa7.18□□□□□ -1.26
GFAP-227ENST00000638400 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
GFAP-227ENST00000638400 A8MWP4 228 aa7.17□□□□□ -1.26
GFAP-227ENST00000638400 SPINK1P00995 79 aa7.16□□□□□ -1.26
GFAP-227ENST00000638400 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
GFAP-227ENST00000638400 SSBP3-AS1Q7Z2R9 100 aa7.16□□□□□ -1.26
GFAP-227ENST00000638400 PRR15Q8IV56 129 aa7.16□□□□□ -1.26
GFAP-227ENST00000638400 LINC00472Q9H8W2 130 aa7.16□□□□□ -1.26
GFAP-227ENST00000638400 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
GFAP-227ENST00000638400 MP68P56378 58 aa7.13□□□□□ -1.27
GFAP-227ENST00000638400 RPS29P62273 56 aaKnown RBP7.13□□□□□ -1.27
GFAP-227ENST00000638400 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
GFAP-227ENST00000638400 MUC2Q02817 5179 aa7.12□□□□□ -1.27
GFAP-227ENST00000638400 CASC2Q6XLA1 102 aa7.11□□□□□ -1.27
GFAP-227ENST00000638400 hDV103S1A0JD37 113 aa7.1□□□□□ -1.27
GFAP-227ENST00000638400 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
GFAP-227ENST00000638400 XP32Q5T750 250 aa7.09□□□□□ -1.27
GFAP-227ENST00000638400 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
GFAP-227ENST00000638400 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
GFAP-227ENST00000638400 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
GFAP-227ENST00000638400 TRAV22A0A0B4J277 110 aa7.06□□□□□ -1.28
GFAP-227ENST00000638400 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
GFAP-227ENST00000638400 WFDC13Q8IUB5 93 aa7.06□□□□□ -1.28
GFAP-227ENST00000638400 TP53AIP1Q9HCN2 124 aa7.06□□□□□ -1.28
GFAP-227ENST00000638400 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
GFAP-227ENST00000638400 KRTAP13-3Q3SY46 172 aa7.05□□□□□ -1.28
GFAP-227ENST00000638400 MUC17Q685J3 4493 aa7.03□□□□□ -1.28
GFAP-227ENST00000638400 H0Y9P7 68 aa7.03□□□□□ -1.28
GFAP-227ENST00000638400 DEFB116Q30KQ4 102 aa7.03□□□□□ -1.28
GFAP-227ENST00000638400 Q96NJ1 140 aa7.03□□□□□ -1.28
GFAP-227ENST00000638400 LIMD2Q9BT23 127 aa7.02□□□□□ -1.29
GFAP-227ENST00000638400 CD164Q04900 197 aa7.01□□□□□ -1.29
GFAP-227ENST00000638400 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
GFAP-227ENST00000638400 Q1T7F1 81 aa6.99□□□□□ -1.29
GFAP-227ENST00000638400 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
GFAP-227ENST00000638400 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
GFAP-227ENST00000638400 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
GFAP-227ENST00000638400 V9GYY9 64 aa6.98□□□□□ -1.29
GFAP-227ENST00000638400 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
GFAP-227ENST00000638400 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
GFAP-227ENST00000638400 SEC61BP60468 96 aaKnown RBP6.94□□□□□ -1.3
GFAP-227ENST00000638400 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
GFAP-227ENST00000638400 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
GFAP-227ENST00000638400 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
GFAP-227ENST00000638400 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
GFAP-227ENST00000638400 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
GFAP-227ENST00000638400 C9orf92A6NGG3 77 aa6.86□□□□□ -1.31
GFAP-227ENST00000638400 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
GFAP-227ENST00000638400 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
GFAP-227ENST00000638400 NDUFS5O43920 106 aa6.8□□□□□ -1.32
GFAP-227ENST00000638400 COA5Q86WW8 74 aa6.8□□□□□ -1.32
GFAP-227ENST00000638400 BRK1Q8WUW1 75 aa6.8□□□□□ -1.32
GFAP-227ENST00000638400 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
GFAP-227ENST00000638400 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
GFAP-227ENST00000638400 Q8N9P0 234 aaPredicted RBP6.78□□□□□ -1.32
GFAP-227ENST00000638400 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
GFAP-227ENST00000638400 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
GFAP-227ENST00000638400 NOTCH2NLQ7Z3S9 236 aa6.74□□□□□ -1.33
GFAP-227ENST00000638400 LINC00313P59037 77 aa6.73□□□□□ -1.33
GFAP-227ENST00000638400 Q75L30 129 aa6.73□□□□□ -1.33
GFAP-227ENST00000638400 Q5VV11 94 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms