RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 SACSQ9NZJ4 4579 aa5.1□□□□□ -1.59
CACNA1A-254ENST00000637952 SPRR1BP22528 89 aa5.1□□□□□ -1.59
CACNA1A-254ENST00000637952 RETNLBQ9BQ08 111 aa5.1□□□□□ -1.59
CACNA1A-254ENST00000637952 DNAH10Q8IVF4 4471 aa5.09□□□□□ -1.59
CACNA1A-254ENST00000637952 IGHV6-1A0A0B4J1U7 121 aa5.09□□□□□ -1.59
CACNA1A-254ENST00000637952 LYSTQ99698 3801 aa5.09□□□□□ -1.59
CACNA1A-254ENST00000637952 Q6ZQT0 140 aa5.09□□□□□ -1.6
CACNA1A-254ENST00000637952 Q75L30 129 aa5.09□□□□□ -1.6
CACNA1A-254ENST00000637952 C1orf64Q8NEQ6 169 aa5.09□□□□□ -1.6
CACNA1A-254ENST00000637952 ZCCHC13Q8WW36 166 aaKnown RBP5.09□□□□□ -1.6
CACNA1A-254ENST00000637952 KMT2CQ8NEZ4 4911 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-254ENST00000637952 DYNC2H1Q8NCM8 4307 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-254ENST00000637952 SMIM29Q86T20 159 aa5.08□□□□□ -1.6
CACNA1A-254ENST00000637952 PSPHP1O15172 72 aa5.08□□□□□ -1.6
CACNA1A-254ENST00000637952 LINC00483Q53H64 154 aa5.07□□□□□ -1.6
CACNA1A-254ENST00000637952 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
CACNA1A-254ENST00000637952 LINC01547P58512 204 aaPredicted RBP5.06□□□□□ -1.6
CACNA1A-254ENST00000637952 A0A1W2PNM2 257 aa5.06□□□□□ -1.6
CACNA1A-254ENST00000637952 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
CACNA1A-254ENST00000637952 HYDINQ4G0P3 5121 aa5.05□□□□□ -1.6
CACNA1A-254ENST00000637952 WFDC13Q8IUB5 93 aa5.05□□□□□ -1.6
CACNA1A-254ENST00000637952 RYR2Q92736 4967 aa5.05□□□□□ -1.6
CACNA1A-254ENST00000637952 DNAH5Q8TE73 4624 aa5.05□□□□□ -1.6
CACNA1A-254ENST00000637952 DNAH11Q96DT5 4516 aa5.04□□□□□ -1.6
CACNA1A-254ENST00000637952 ATP5EP2Q5VTU8 51 aa5.04□□□□□ -1.6
CACNA1A-254ENST00000637952 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
CACNA1A-254ENST00000637952 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
CACNA1A-254ENST00000637952 A0A1B0GW54 56 aa5.03□□□□□ -1.6
CACNA1A-254ENST00000637952 IGLV7-46A0A075B6I9 117 aa5.03□□□□□ -1.6
CACNA1A-254ENST00000637952 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 DNAH17Q9UFH2 4485 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
CACNA1A-254ENST00000637952 P0C880 135 aa5.01□□□□□ -1.61
CACNA1A-254ENST00000637952 Q8N9L7 120 aa5□□□□□ -1.61
CACNA1A-254ENST00000637952 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
CACNA1A-254ENST00000637952 DYNC1H1Q14204 4646 aaKnown RBP5□□□□□ -1.61
CACNA1A-254ENST00000637952 Q96NJ1 140 aa4.99□□□□□ -1.61
CACNA1A-254ENST00000637952 MP68P56378 58 aa4.99□□□□□ -1.61
CACNA1A-254ENST00000637952 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
CACNA1A-254ENST00000637952 DNAH2Q9P225 4427 aa4.98□□□□□ -1.61
CACNA1A-254ENST00000637952 LRP1BQ9NZR2 4599 aa4.98□□□□□ -1.61
CACNA1A-254ENST00000637952 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
CACNA1A-254ENST00000637952 NOTCH2NLQ7Z3S9 236 aa4.97□□□□□ -1.61
CACNA1A-254ENST00000637952 DSCR10P59022 87 aa4.97□□□□□ -1.61
CACNA1A-254ENST00000637952 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
CACNA1A-254ENST00000637952 RYR3Q15413 4870 aa4.96□□□□□ -1.62
CACNA1A-254ENST00000637952 KIAA1109Q2LD37 5005 aa4.95□□□□□ -1.62
CACNA1A-254ENST00000637952 A8MWP4 228 aa4.95□□□□□ -1.62
CACNA1A-254ENST00000637952 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CACNA1A-254ENST00000637952 K7EQZ3 153 aa4.93□□□□□ -1.62
CACNA1A-254ENST00000637952 FAT1Q14517 4588 aa4.93□□□□□ -1.62
CACNA1A-254ENST00000637952 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
CACNA1A-254ENST00000637952 CXCL6P80162 114 aa4.92□□□□□ -1.62
CACNA1A-254ENST00000637952 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
CACNA1A-254ENST00000637952 ASB16-AS1Q495Z4 193 aa4.91□□□□□ -1.62
CACNA1A-254ENST00000637952 DNAH6Q9C0G6 4158 aa4.91□□□□□ -1.62
CACNA1A-254ENST00000637952 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
CACNA1A-254ENST00000637952 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.62
CACNA1A-254ENST00000637952 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
CACNA1A-254ENST00000637952 LINC00472Q9H8W2 130 aa4.88□□□□□ -1.63
CACNA1A-254ENST00000637952 RPS29P62273 56 aaKnown RBP4.88□□□□□ -1.63
CACNA1A-254ENST00000637952 ROMO1P60602 79 aa4.87□□□□□ -1.63
CACNA1A-254ENST00000637952 MRPL34Q9BQ48 92 aaKnown RBP4.87□□□□□ -1.63
CACNA1A-254ENST00000637952 FAT2Q9NYQ8 4349 aa4.86□□□□□ -1.63
CACNA1A-254ENST00000637952 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
CACNA1A-254ENST00000637952 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
CACNA1A-254ENST00000637952 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
CACNA1A-254ENST00000637952 LCE2AQ5TA79 106 aaPredicted RBP4.85□□□□□ -1.63
CACNA1A-254ENST00000637952 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
CACNA1A-254ENST00000637952 SPINK7P58062 85 aa4.84□□□□□ -1.63
CACNA1A-254ENST00000637952 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.64
CACNA1A-254ENST00000637952 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
CACNA1A-254ENST00000637952 CHKB-CPT1BH3BT56 60 aa4.82□□□□□ -1.64
CACNA1A-254ENST00000637952 RYR1P21817 5038 aa4.82□□□□□ -1.64
CACNA1A-254ENST00000637952 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
CACNA1A-254ENST00000637952 MT1HL1P0DM35 61 aa4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 HECTD4Q9Y4D8 3996 aa4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 LINC00208Q96KT6 92 aa4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 TP53AIP1Q9HCN2 124 aa4.81□□□□□ -1.64
CACNA1A-254ENST00000637952 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
CACNA1A-254ENST00000637952 H0Y9P7 68 aa4.79□□□□□ -1.64
CACNA1A-254ENST00000637952 PKD1P98161 4303 aa4.79□□□□□ -1.64
CACNA1A-254ENST00000637952 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
CACNA1A-254ENST00000637952 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
CACNA1A-254ENST00000637952 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
CACNA1A-254ENST00000637952 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
CACNA1A-254ENST00000637952 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
CACNA1A-254ENST00000637952 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
CACNA1A-254ENST00000637952 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
CACNA1A-254ENST00000637952 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
CACNA1A-254ENST00000637952 HERC2O95714 4834 aa4.72□□□□□ -1.65
CACNA1A-254ENST00000637952 HSPG2P98160 4391 aa4.72□□□□□ -1.65
CACNA1A-254ENST00000637952 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms