RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
CLN6-223ENST00000637823 PRR15Q8IV56 129 aa6.68□□□□□ -1.34
CLN6-223ENST00000637823 Q8N9L7 120 aa6.68□□□□□ -1.34
CLN6-223ENST00000637823 HERC1Q15751 4861 aa6.68□□□□□ -1.34
CLN6-223ENST00000637823 TNXBP22105 4242 aa6.68□□□□□ -1.34
CLN6-223ENST00000637823 K7EQZ3 153 aa6.67□□□□□ -1.34
CLN6-223ENST00000637823 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
CLN6-223ENST00000637823 A0A1B0GVX0 72 aa6.65□□□□□ -1.34
CLN6-223ENST00000637823 A0A087WVE0 104 aa6.64□□□□□ -1.35
CLN6-223ENST00000637823 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
CLN6-223ENST00000637823 SCGB1A1P11684 91 aa6.62□□□□□ -1.35
CLN6-223ENST00000637823 MYCBP2O75592 4640 aa6.61□□□□□ -1.35
CLN6-223ENST00000637823 HCG22E2RYF7 251 aa6.6□□□□□ -1.35
CLN6-223ENST00000637823 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
CLN6-223ENST00000637823 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
CLN6-223ENST00000637823 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.35
CLN6-223ENST00000637823 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.35
CLN6-223ENST00000637823 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.35
CLN6-223ENST00000637823 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
CLN6-223ENST00000637823 LINC00313P59037 77 aa6.58□□□□□ -1.36
CLN6-223ENST00000637823 FP248Q71RG6 208 aaPredicted RBP6.58□□□□□ -1.36
CLN6-223ENST00000637823 LCE2BO14633 110 aa6.57□□□□□ -1.36
CLN6-223ENST00000637823 CASC2Q6XLA1 102 aa6.57□□□□□ -1.36
CLN6-223ENST00000637823 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
CLN6-223ENST00000637823 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
CLN6-223ENST00000637823 NOTCH2NLQ7Z3S9 236 aa6.56□□□□□ -1.36
CLN6-223ENST00000637823 ATOX1O00244 68 aa6.54□□□□□ -1.36
CLN6-223ENST00000637823 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
CLN6-223ENST00000637823 MRPL34Q9BQ48 92 aaKnown RBP6.52□□□□□ -1.37
CLN6-223ENST00000637823 IGLV7-46A0A075B6I9 117 aa6.51□□□□□ -1.37
CLN6-223ENST00000637823 SMIM20Q8N5G0 67 aa6.51□□□□□ -1.37
CLN6-223ENST00000637823 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
CLN6-223ENST00000637823 PRR4Q16378 134 aa6.48□□□□□ -1.37
CLN6-223ENST00000637823 TRAV7A0A075B6U4 112 aa6.47□□□□□ -1.37
CLN6-223ENST00000637823 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
CLN6-223ENST00000637823 ANAPC13Q9BS18 74 aa6.47□□□□□ -1.37
CLN6-223ENST00000637823 OCR1Q9BZK8 76 aa6.47□□□□□ -1.37
CLN6-223ENST00000637823 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
CLN6-223ENST00000637823 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
CLN6-223ENST00000637823 TP53AIP1Q9HCN2 124 aa6.46□□□□□ -1.38
CLN6-223ENST00000637823 NDUFS5O43920 106 aa6.45□□□□□ -1.38
CLN6-223ENST00000637823 UQCRQO14949 82 aa6.44□□□□□ -1.38
CLN6-223ENST00000637823 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
CLN6-223ENST00000637823 A8MUU9 505 aa6.41□□□□□ -1.38
CLN6-223ENST00000637823 COX7CP15954 63 aa6.41□□□□□ -1.38
CLN6-223ENST00000637823 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
CLN6-223ENST00000637823 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
CLN6-223ENST00000637823 C5orf47Q569G3 176 aa6.4□□□□□ -1.38
CLN6-223ENST00000637823 PCP4P48539 62 aa6.38□□□□□ -1.39
CLN6-223ENST00000637823 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
CLN6-223ENST00000637823 Q75L30 129 aa6.38□□□□□ -1.39
CLN6-223ENST00000637823 XP32Q5T750 250 aa6.37□□□□□ -1.39
CLN6-223ENST00000637823 TRAV22A0A0B4J277 110 aa6.36□□□□□ -1.39
CLN6-223ENST00000637823 MP68P56378 58 aa6.36□□□□□ -1.39
CLN6-223ENST00000637823 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
CLN6-223ENST00000637823 H0Y9P7 68 aa6.35□□□□□ -1.39
CLN6-223ENST00000637823 Q5W150 140 aa6.35□□□□□ -1.39
CLN6-223ENST00000637823 H3BPC8 53 aa6.34□□□□□ -1.39
CLN6-223ENST00000637823 ZCCHC13Q8WW36 166 aaKnown RBP6.34□□□□□ -1.39
CLN6-223ENST00000637823 RPL37P61927 97 aaKnown RBP6.33□□□□□ -1.4
CLN6-223ENST00000637823 H3BS24 57 aa6.32□□□□□ -1.4
CLN6-223ENST00000637823 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
CLN6-223ENST00000637823 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
CLN6-223ENST00000637823 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
CLN6-223ENST00000637823 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
CLN6-223ENST00000637823 LINC00208Q96KT6 92 aa6.3□□□□□ -1.4
CLN6-223ENST00000637823 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
CLN6-223ENST00000637823 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
CLN6-223ENST00000637823 KLKP1Q107X0 134 aa6.28□□□□□ -1.4
CLN6-223ENST00000637823 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
CLN6-223ENST00000637823 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
CLN6-223ENST00000637823 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
CLN6-223ENST00000637823 NDUFC1O43677 76 aa6.23□□□□□ -1.41
CLN6-223ENST00000637823 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
CLN6-223ENST00000637823 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
CLN6-223ENST00000637823 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
CLN6-223ENST00000637823 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.42
CLN6-223ENST00000637823 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
CLN6-223ENST00000637823 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
CLN6-223ENST00000637823 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
CLN6-223ENST00000637823 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
CLN6-223ENST00000637823 LPAP08519 4548 aa6.19□□□□□ -1.42
CLN6-223ENST00000637823 SPINK7P58062 85 aa6.18□□□□□ -1.42
CLN6-223ENST00000637823 H7BZZ5 65 aa6.17□□□□□ -1.42
CLN6-223ENST00000637823 LRP2P98164 4655 aa6.16□□□□□ -1.42
CLN6-223ENST00000637823 HRES1P13985 223 aa6.11□□□□□ -1.43
CLN6-223ENST00000637823 TMEM258P61165 79 aa6.11□□□□□ -1.43
CLN6-223ENST00000637823 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
CLN6-223ENST00000637823 ATP5EP56381 51 aaPredicted RBP6.07□□□□□ -1.44
CLN6-223ENST00000637823 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
CLN6-223ENST00000637823 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
CLN6-223ENST00000637823 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
CLN6-223ENST00000637823 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
CLN6-223ENST00000637823 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
CLN6-223ENST00000637823 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
CLN6-223ENST00000637823 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
CLN6-223ENST00000637823 A8MUN3 132 aa6□□□□□ -1.45
CLN6-223ENST00000637823 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
CLN6-223ENST00000637823 DMAC1Q96GE9 116 aa6□□□□□ -1.45
CLN6-223ENST00000637823 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms