RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
CACNA1A-248ENST00000637774 DNAH6Q9C0G6 4158 aa5.72□□□□□ -1.49
CACNA1A-248ENST00000637774 Q1T7F1 81 aa5.72□□□□□ -1.49
CACNA1A-248ENST00000637774 LCE6AA0A183 80 aa5.72□□□□□ -1.49
CACNA1A-248ENST00000637774 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
CACNA1A-248ENST00000637774 KTN1-AS1Q86SY8 53 aa5.71□□□□□ -1.5
CACNA1A-248ENST00000637774 SSBP3-AS1Q7Z2R9 100 aa5.71□□□□□ -1.5
CACNA1A-248ENST00000637774 HECTD4Q9Y4D8 3996 aa5.71□□□□□ -1.5
CACNA1A-248ENST00000637774 A0A1B0GVX0 72 aa5.7□□□□□ -1.5
CACNA1A-248ENST00000637774 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
CACNA1A-248ENST00000637774 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
CACNA1A-248ENST00000637774 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
CACNA1A-248ENST00000637774 MMP24-AS1A0A0U1RRL7 71 aa5.69□□□□□ -1.5
CACNA1A-248ENST00000637774 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
CACNA1A-248ENST00000637774 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
CACNA1A-248ENST00000637774 DNAH17Q9UFH2 4485 aa5.68□□□□□ -1.5
CACNA1A-248ENST00000637774 Q6ZSA8 131 aa5.68□□□□□ -1.5
CACNA1A-248ENST00000637774 KRTAP13-2Q52LG2 175 aa5.67□□□□□ -1.5
CACNA1A-248ENST00000637774 Q96NJ1 140 aa5.67□□□□□ -1.5
CACNA1A-248ENST00000637774 A8MUN3 132 aa5.67□□□□□ -1.5
CACNA1A-248ENST00000637774 H3BS24 57 aa5.66□□□□□ -1.5
CACNA1A-248ENST00000637774 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
CACNA1A-248ENST00000637774 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
CACNA1A-248ENST00000637774 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
CACNA1A-248ENST00000637774 LINC00313P59037 77 aa5.64□□□□□ -1.51
CACNA1A-248ENST00000637774 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
CACNA1A-248ENST00000637774 C8orf87E5RJ46 101 aa5.63□□□□□ -1.51
CACNA1A-248ENST00000637774 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
CACNA1A-248ENST00000637774 Q5VV11 94 aa5.63□□□□□ -1.51
CACNA1A-248ENST00000637774 DNAH5Q8TE73 4624 aa5.62□□□□□ -1.51
CACNA1A-248ENST00000637774 LIMD2Q9BT23 127 aa5.62□□□□□ -1.51
CACNA1A-248ENST00000637774 LINC00304Q8N9R0 145 aa5.61□□□□□ -1.51
CACNA1A-248ENST00000637774 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
CACNA1A-248ENST00000637774 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.51
CACNA1A-248ENST00000637774 A6NN06 94 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 FAT1Q14517 4588 aa5.58□□□□□ -1.52
CACNA1A-248ENST00000637774 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
CACNA1A-248ENST00000637774 LCA10Q71F78 164 aa5.57□□□□□ -1.52
CACNA1A-248ENST00000637774 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
CACNA1A-248ENST00000637774 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
CACNA1A-248ENST00000637774 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
CACNA1A-248ENST00000637774 SPINK1P00995 79 aa5.55□□□□□ -1.52
CACNA1A-248ENST00000637774 Q5W150 140 aa5.55□□□□□ -1.52
CACNA1A-248ENST00000637774 VPS13BQ7Z7G8 4022 aa5.53□□□□□ -1.52
CACNA1A-248ENST00000637774 H3BPC8 53 aa5.53□□□□□ -1.52
CACNA1A-248ENST00000637774 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
CACNA1A-248ENST00000637774 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
CACNA1A-248ENST00000637774 C7orf65Q6ZTY9 151 aa5.52□□□□□ -1.53
CACNA1A-248ENST00000637774 Q8N9P0 234 aaPredicted RBP5.52□□□□□ -1.53
CACNA1A-248ENST00000637774 KMT2CQ8NEZ4 4911 aaKnown RBP5.51□□□□□ -1.53
CACNA1A-248ENST00000637774 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
CACNA1A-248ENST00000637774 FAT2Q9NYQ8 4349 aa5.51□□□□□ -1.53
CACNA1A-248ENST00000637774 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
CACNA1A-248ENST00000637774 CYP4F30PQ9H0H9 118 aa5.51□□□□□ -1.53
CACNA1A-248ENST00000637774 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
CACNA1A-248ENST00000637774 A6NED7 52 aa5.48□□□□□ -1.53
CACNA1A-248ENST00000637774 Q5VSD8 79 aa5.48□□□□□ -1.53
CACNA1A-248ENST00000637774 SPAG11AQ6PDA7 123 aa5.48□□□□□ -1.53
CACNA1A-248ENST00000637774 LOC101927531A0A1B0GV80 90 aa5.47□□□□□ -1.53
CACNA1A-248ENST00000637774 COA5Q86WW8 74 aa5.47□□□□□ -1.53
CACNA1A-248ENST00000637774 PKD1P98161 4303 aa5.46□□□□□ -1.54
CACNA1A-248ENST00000637774 ASB16-AS1Q495Z4 193 aa5.45□□□□□ -1.54
CACNA1A-248ENST00000637774 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
CACNA1A-248ENST00000637774 Q75L30 129 aa5.44□□□□□ -1.54
CACNA1A-248ENST00000637774 SPANXA2-OT1Q8N9U9 137 aa5.44□□□□□ -1.54
CACNA1A-248ENST00000637774 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
CACNA1A-248ENST00000637774 IGLV7-46A0A075B6I9 117 aa5.43□□□□□ -1.54
CACNA1A-248ENST00000637774 HRES1P13985 223 aa5.42□□□□□ -1.54
CACNA1A-248ENST00000637774 ADM2Q7Z4H4 148 aa5.4□□□□□ -1.55
CACNA1A-248ENST00000637774 Q8N1X5 172 aa5.4□□□□□ -1.55
CACNA1A-248ENST00000637774 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
CACNA1A-248ENST00000637774 ACYP2P14621 99 aa5.38□□□□□ -1.55
CACNA1A-248ENST00000637774 APOBP04114 4563 aaKnown RBP5.37□□□□□ -1.55
CACNA1A-248ENST00000637774 RYR2Q92736 4967 aa5.37□□□□□ -1.55
CACNA1A-248ENST00000637774 KRTAP16-1A8MUX0 517 aa5.35□□□□□ -1.55
CACNA1A-248ENST00000637774 SPINK7P58062 85 aa5.35□□□□□ -1.55
CACNA1A-248ENST00000637774 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
CACNA1A-248ENST00000637774 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.56
CACNA1A-248ENST00000637774 KIAA1109Q2LD37 5005 aa5.32□□□□□ -1.56
CACNA1A-248ENST00000637774 KRTAP13-3Q3SY46 172 aa5.31□□□□□ -1.56
CACNA1A-248ENST00000637774 RPS29P62273 56 aaKnown RBP5.3□□□□□ -1.56
CACNA1A-248ENST00000637774 RYR3Q15413 4870 aa5.3□□□□□ -1.56
CACNA1A-248ENST00000637774 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
CACNA1A-248ENST00000637774 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
CACNA1A-248ENST00000637774 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
CACNA1A-248ENST00000637774 A0A1B0GU69 56 aa5.24□□□□□ -1.57
CACNA1A-248ENST00000637774 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
CACNA1A-248ENST00000637774 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
CACNA1A-248ENST00000637774 A8MUU9 505 aa5.21□□□□□ -1.57
CACNA1A-248ENST00000637774 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
CACNA1A-248ENST00000637774 J3QL48 77 aa5.21□□□□□ -1.58
CACNA1A-248ENST00000637774 RYR1P21817 5038 aa5.2□□□□□ -1.58
CACNA1A-248ENST00000637774 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
CACNA1A-248ENST00000637774 HSPG2P98160 4391 aa5.18□□□□□ -1.58
CACNA1A-248ENST00000637774 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
CACNA1A-248ENST00000637774 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms