RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 ZFHX3Q15911 3703 aa3.93□□□□□ -1.78
SCN2A-216ENST00000637367 Q5W150 140 aa3.92□□□□□ -1.78
SCN2A-216ENST00000637367 A0A1B0GU33 70 aa3.92□□□□□ -1.78
SCN2A-216ENST00000637367 PKD1L1Q8TDX9 2849 aa3.92□□□□□ -1.78
SCN2A-216ENST00000637367 SPRR1BP22528 89 aa3.92□□□□□ -1.78
SCN2A-216ENST00000637367 KRTAP4-16G5E9R7 235 aaPredicted RBP3.91□□□□□ -1.78
SCN2A-216ENST00000637367 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
SCN2A-216ENST00000637367 CUBNO60494 3623 aa3.9□□□□□ -1.78
SCN2A-216ENST00000637367 CSAG1Q6PB30 78 aa3.9□□□□□ -1.78
SCN2A-216ENST00000637367 PDZD2O15018 2839 aa3.9□□□□□ -1.78
SCN2A-216ENST00000637367 TENM1Q9UKZ4 2725 aa3.9□□□□□ -1.79
SCN2A-216ENST00000637367 A0A087X002 238 aa3.89□□□□□ -1.79
SCN2A-216ENST00000637367 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
SCN2A-216ENST00000637367 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
SCN2A-216ENST00000637367 A8MU10 97 aa3.88□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP29-1A8MX34 341 aaPredicted RBP3.88□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
SCN2A-216ENST00000637367 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
SCN2A-216ENST00000637367 J3QL48 77 aa3.87□□□□□ -1.79
SCN2A-216ENST00000637367 VWFP04275 2813 aa3.86□□□□□ -1.79
SCN2A-216ENST00000637367 H3BS24 57 aa3.86□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP3-3Q9BYR6 98 aa3.86□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP3-2Q9BYR7 98 aa3.86□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
SCN2A-216ENST00000637367 FBN1P35555 2871 aaKnown RBP3.84□□□□□ -1.79
SCN2A-216ENST00000637367 KRTAP10-2P60368 255 aa3.84□□□□□ -1.8
SCN2A-216ENST00000637367 SRRM2Q9UQ35 2752 aaKnown RBP3.84□□□□□ -1.8
SCN2A-216ENST00000637367 CSMD1Q96PZ7 3565 aa3.83□□□□□ -1.8
SCN2A-216ENST00000637367 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
SCN2A-216ENST00000637367 Q6ZR54 194 aa3.81□□□□□ -1.8
SCN2A-216ENST00000637367 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
SCN2A-216ENST00000637367 SVEP1Q4LDE5 3571 aa3.8□□□□□ -1.8
SCN2A-216ENST00000637367 Q6ZSA8 131 aa3.8□□□□□ -1.8
SCN2A-216ENST00000637367 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
SCN2A-216ENST00000637367 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
SCN2A-216ENST00000637367 AKAP9Q99996 3911 aa3.79□□□□□ -1.8
SCN2A-216ENST00000637367 NBPF19A0A087WUL8 3843 aa3.79□□□□□ -1.8
SCN2A-216ENST00000637367 ZNF469Q96JG9 3925 aaPredicted RBP3.79□□□□□ -1.8
SCN2A-216ENST00000637367 CAMK2N1Q7Z7J9 78 aa3.78□□□□□ -1.8
SCN2A-216ENST00000637367 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.8
SCN2A-216ENST00000637367 TGP01266 2768 aa3.78□□□□□ -1.8
SCN2A-216ENST00000637367 LINC00483Q53H64 154 aa3.78□□□□□ -1.8
SCN2A-216ENST00000637367 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SCN2A-216ENST00000637367 LCE6AA0A183 80 aa3.76□□□□□ -1.81
SCN2A-216ENST00000637367 TENM2Q9NT68 2774 aa3.75□□□□□ -1.81
SCN2A-216ENST00000637367 S4R3F8 94 aa3.75□□□□□ -1.81
SCN2A-216ENST00000637367 A6NN06 94 aa3.74□□□□□ -1.81
SCN2A-216ENST00000637367 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
SCN2A-216ENST00000637367 H1FX-AS1Q4G0G2 97 aa3.73□□□□□ -1.81
SCN2A-216ENST00000637367 R4GN34 69 aa3.72□□□□□ -1.81
SCN2A-216ENST00000637367 Q6ZRN7 208 aaPredicted RBP3.71□□□□□ -1.82
SCN2A-216ENST00000637367 ROMO1P60602 79 aa3.7□□□□□ -1.82
SCN2A-216ENST00000637367 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
SCN2A-216ENST00000637367 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
SCN2A-216ENST00000637367 M0QZ58 72 aa3.67□□□□□ -1.82
SCN2A-216ENST00000637367 Q5VSD8 79 aa3.67□□□□□ -1.82
SCN2A-216ENST00000637367 ANK3Q12955 4377 aaKnown RBP3.67□□□□□ -1.82
SCN2A-216ENST00000637367 M0R2T5 61 aa3.67□□□□□ -1.82
SCN2A-216ENST00000637367 OTOGQ6ZRI0 2925 aa3.66□□□□□ -1.82
SCN2A-216ENST00000637367 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
SCN2A-216ENST00000637367 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
SCN2A-216ENST00000637367 FBN3Q75N90 2809 aa3.61□□□□□ -1.83
SCN2A-216ENST00000637367 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
SCN2A-216ENST00000637367 A0A0A0MQY5 61 aa3.58□□□□□ -1.84
SCN2A-216ENST00000637367 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
SCN2A-216ENST00000637367 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
SCN2A-216ENST00000637367 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
SCN2A-216ENST00000637367 DNAH3Q8TD57 4116 aa3.55□□□□□ -1.84
SCN2A-216ENST00000637367 LCE2BO14633 110 aa3.54□□□□□ -1.84
SCN2A-216ENST00000637367 A8MUU9 505 aa3.54□□□□□ -1.84
SCN2A-216ENST00000637367 C10orf95Q9H7T3 257 aa3.54□□□□□ -1.84
SCN2A-216ENST00000637367 MEGF8Q7Z7M0 2845 aa3.52□□□□□ -1.85
SCN2A-216ENST00000637367 ANK2Q01484 3957 aa3.52□□□□□ -1.85
SCN2A-216ENST00000637367 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SCN2A-216ENST00000637367 KRTAP1-4P0C5Y4 121 aa3.5□□□□□ -1.85
SCN2A-216ENST00000637367 H0YAA0 97 aa3.5□□□□□ -1.85
SCN2A-216ENST00000637367 RPS29P62273 56 aaKnown RBP3.5□□□□□ -1.85
SCN2A-216ENST00000637367 C20orf166-AS1Q96NR2 134 aa3.47□□□□□ -1.85
SCN2A-216ENST00000637367 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
SCN2A-216ENST00000637367 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
SCN2A-216ENST00000637367 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
SCN2A-216ENST00000637367 P0C880 135 aa3.41□□□□□ -1.86
SCN2A-216ENST00000637367 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-216ENST00000637367 XP32Q5T750 250 aa3.4□□□□□ -1.87
SCN2A-216ENST00000637367 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
SCN2A-216ENST00000637367 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
SCN2A-216ENST00000637367 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SCN2A-216ENST00000637367 DYNC2H1Q8NCM8 4307 aaKnown RBP3.36□□□□□ -1.87
SCN2A-216ENST00000637367 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
SCN2A-216ENST00000637367 TNP1P09430 55 aa3.35□□□□□ -1.87
SCN2A-216ENST00000637367 DNAH7Q8WXX0 4024 aa3.31□□□□□ -1.88
SCN2A-216ENST00000637367 CSMD3Q7Z407 3707 aa3.3□□□□□ -1.88
SCN2A-216ENST00000637367 LYSTQ99698 3801 aa3.29□□□□□ -1.88
SCN2A-216ENST00000637367 PRKDCP78527 4128 aaKnown RBP3.28□□□□□ -1.88
SCN2A-216ENST00000637367 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.89
SCN2A-216ENST00000637367 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
SCN2A-216ENST00000637367 KRTAP3-1Q9BYR8 98 aa3.26□□□□□ -1.89
SCN2A-216ENST00000637367 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
SCN2A-216ENST00000637367 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
SCN2A-216ENST00000637367 PP632Q6XCG6 107 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms