RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 CSMD2Q7Z408 3487 aa9.83□□□□□ -0.84
CLCN2-215ENST00000636661 ZFHX3Q15911 3703 aa9.82□□□□□ -0.84
CLCN2-215ENST00000636661 Q5VV11 94 aa9.81□□□□□ -0.84
CLCN2-215ENST00000636661 KRTAP29-1A8MX34 341 aaPredicted RBP9.76□□□□□ -0.85
CLCN2-215ENST00000636661 Q75L30 129 aa9.75□□□□□ -0.85
CLCN2-215ENST00000636661 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
CLCN2-215ENST00000636661 Q5W150 140 aa9.75□□□□□ -0.85
CLCN2-215ENST00000636661 A0A087X002 238 aa9.74□□□□□ -0.85
CLCN2-215ENST00000636661 SPINK7P58062 85 aa9.74□□□□□ -0.85
CLCN2-215ENST00000636661 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
CLCN2-215ENST00000636661 LINC01558Q9Y6Z2 57 aa9.73□□□□□ -0.85
CLCN2-215ENST00000636661 A0A0D9SG42 100 aa9.72□□□□□ -0.85
CLCN2-215ENST00000636661 NBPF19A0A087WUL8 3843 aa9.71□□□□□ -0.85
CLCN2-215ENST00000636661 ZCCHC13Q8WW36 166 aaKnown RBP9.71□□□□□ -0.85
CLCN2-215ENST00000636661 LCA10Q71F78 164 aa9.68□□□□□ -0.86
CLCN2-215ENST00000636661 TGP01266 2768 aa9.68□□□□□ -0.86
CLCN2-215ENST00000636661 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
CLCN2-215ENST00000636661 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
CLCN2-215ENST00000636661 PRAC1Q96KF2 57 aa9.66□□□□□ -0.86
CLCN2-215ENST00000636661 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
CLCN2-215ENST00000636661 LINC00483Q53H64 154 aa9.62□□□□□ -0.87
CLCN2-215ENST00000636661 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
CLCN2-215ENST00000636661 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
CLCN2-215ENST00000636661 LINC01554Q52M75 96 aa9.58□□□□□ -0.88
CLCN2-215ENST00000636661 Q6ZRN7 208 aaPredicted RBP9.58□□□□□ -0.88
CLCN2-215ENST00000636661 Q6ZR54 194 aa9.57□□□□□ -0.88
CLCN2-215ENST00000636661 A0A1B0GU33 70 aa9.56□□□□□ -0.88
CLCN2-215ENST00000636661 A8MU10 97 aa9.52□□□□□ -0.88
CLCN2-215ENST00000636661 J3QL48 77 aa9.52□□□□□ -0.89
CLCN2-215ENST00000636661 LCE6AA0A183 80 aa9.5□□□□□ -0.89
CLCN2-215ENST00000636661 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
CLCN2-215ENST00000636661 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
CLCN2-215ENST00000636661 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
CLCN2-215ENST00000636661 KRTAP13-1Q8IUC0 172 aa9.46□□□□□ -0.9
CLCN2-215ENST00000636661 CSAG1Q6PB30 78 aa9.39□□□□□ -0.91
CLCN2-215ENST00000636661 Q6ZSA8 131 aa9.37□□□□□ -0.91
CLCN2-215ENST00000636661 KRTAP13-2Q52LG2 175 aa9.36□□□□□ -0.91
CLCN2-215ENST00000636661 BSNQ9UPA5 3926 aa9.36□□□□□ -0.91
CLCN2-215ENST00000636661 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
CLCN2-215ENST00000636661 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.93
CLCN2-215ENST00000636661 FBN3Q75N90 2809 aa9.25□□□□□ -0.93
CLCN2-215ENST00000636661 Q5VSD8 79 aa9.24□□□□□ -0.93
CLCN2-215ENST00000636661 S4R3F8 94 aa9.22□□□□□ -0.93
CLCN2-215ENST00000636661 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.93
CLCN2-215ENST00000636661 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
CLCN2-215ENST00000636661 A6NN06 94 aa9.17□□□□□ -0.94
CLCN2-215ENST00000636661 H1FX-AS1Q4G0G2 97 aa9.16□□□□□ -0.94
CLCN2-215ENST00000636661 RPL37P61927 97 aaKnown RBP9.12□□□□□ -0.95
CLCN2-215ENST00000636661 VPS13CQ709C8 3753 aa9.1□□□□□ -0.95
CLCN2-215ENST00000636661 CAMK2N1Q7Z7J9 78 aa9.1□□□□□ -0.95
CLCN2-215ENST00000636661 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
CLCN2-215ENST00000636661 R4GN34 69 aa9.06□□□□□ -0.96
CLCN2-215ENST00000636661 H3BS24 57 aa9□□□□□ -0.97
CLCN2-215ENST00000636661 ROMO1P60602 79 aa8.99□□□□□ -0.97
CLCN2-215ENST00000636661 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
CLCN2-215ENST00000636661 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
CLCN2-215ENST00000636661 M0QZ58 72 aa8.95□□□□□ -0.98
CLCN2-215ENST00000636661 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
CLCN2-215ENST00000636661 M0R2T5 61 aa8.9□□□□□ -0.98
CLCN2-215ENST00000636661 ANK3Q12955 4377 aaKnown RBP8.89□□□□□ -0.99
CLCN2-215ENST00000636661 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
CLCN2-215ENST00000636661 LUZP6Q538Z0 58 aa8.86□□□□□ -0.99
CLCN2-215ENST00000636661 A8MUU9 505 aa8.84□□□□□ -0.99
CLCN2-215ENST00000636661 ZNF469Q96JG9 3925 aaPredicted RBP8.81□□□□□ -1
CLCN2-215ENST00000636661 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
CLCN2-215ENST00000636661 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
CLCN2-215ENST00000636661 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
CLCN2-215ENST00000636661 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
CLCN2-215ENST00000636661 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
CLCN2-215ENST00000636661 H0YAA0 97 aa8.68□□□□□ -1.02
CLCN2-215ENST00000636661 XP32Q5T750 250 aa8.6□□□□□ -1.03
CLCN2-215ENST00000636661 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
CLCN2-215ENST00000636661 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
CLCN2-215ENST00000636661 P0C880 135 aa8.47□□□□□ -1.05
CLCN2-215ENST00000636661 KRTAP21-3Q3LHN1 58 aa8.47□□□□□ -1.05
CLCN2-215ENST00000636661 AKAP9Q99996 3911 aa8.38□□□□□ -1.07
CLCN2-215ENST00000636661 PLAC4Q8WY50 150 aa8.37□□□□□ -1.07
CLCN2-215ENST00000636661 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
CLCN2-215ENST00000636661 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
CLCN2-215ENST00000636661 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
CLCN2-215ENST00000636661 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
CLCN2-215ENST00000636661 HUWE1Q7Z6Z7 4374 aaKnown RBP8.24□□□□□ -1.09
CLCN2-215ENST00000636661 TPRXLQ17RH7 258 aa8.23□□□□□ -1.09
CLCN2-215ENST00000636661 TNP1P09430 55 aa8.16□□□□□ -1.1
CLCN2-215ENST00000636661 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
CLCN2-215ENST00000636661 KRTAP13-4Q3LI77 160 aa8.04□□□□□ -1.12
CLCN2-215ENST00000636661 DNHD1Q96M86 4753 aa7.99□□□□□ -1.13
CLCN2-215ENST00000636661 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
CLCN2-215ENST00000636661 KRTAP12-1P59990 96 aa7.97□□□□□ -1.13
CLCN2-215ENST00000636661 DNAH10Q8IVF4 4471 aa7.96□□□□□ -1.13
CLCN2-215ENST00000636661 PLECQ15149 4684 aaKnown RBP7.93□□□□□ -1.14
CLCN2-215ENST00000636661 PP632Q6XCG6 107 aa7.92□□□□□ -1.14
CLCN2-215ENST00000636661 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
CLCN2-215ENST00000636661 DNAH11Q96DT5 4516 aa7.89□□□□□ -1.15
CLCN2-215ENST00000636661 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
CLCN2-215ENST00000636661 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
CLCN2-215ENST00000636661 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
CLCN2-215ENST00000636661 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
CLCN2-215ENST00000636661 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
CLCN2-215ENST00000636661 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms