RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 ETDBQ3ZM63 59 aa-2.53□□□□□ -2.81
CDKL5-210ENST00000636046 C8orf59Q8N0T1 100 aaPredicted RBP-2.53□□□□□ -2.81
CDKL5-210ENST00000636046 HFM1A2PYH4 1435 aa-2.53□□□□□ -2.81
CDKL5-210ENST00000636046 PZPP20742 1482 aa-2.53□□□□□ -2.81
CDKL5-210ENST00000636046 MYH4Q9Y623 1939 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 DEXIO95424 95 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 MPC2O95563 127 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 UQCRHP07919 91 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 RBP2P50120 134 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 DEFB131AP59861 70 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 LINC01556Q5JQF7 62 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 OR13C6PQ8NH95 151 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 CC2D2AQ9P2K1 1620 aa-2.54□□□□□ -2.82
CDKL5-210ENST00000636046 hADV29S1A0JD25 119 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 UMAD1C9J7I0 102 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 TPM4P67936 248 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 TCHHQ07283 1943 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 C2orf88Q9BSF0 95 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 NKIRAS1Q9NYS0 192 aa-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.55□□□□□ -2.82
CDKL5-210ENST00000636046 FOCADQ5VW36 1801 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 LTN1O94822 1766 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 MROH1Q8NDA8 1641 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 RAPGEF2Q9Y4G8 1499 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 ETDCA0A1B0GVM5 59 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 A0A1W2PRE2 83 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 SPA17Q15506 151 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 COPS9Q8WXC6 57 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 NALCNQ8IZF0 1738 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 MYO5CQ9NQX4 1742 aa-2.56□□□□□ -2.82
CDKL5-210ENST00000636046 TTC37Q6PGP7 1564 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 CFTRP13569 1480 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 NAIPQ13075 1403 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 PFDN1O60925 122 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 CSTAP01040 98 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 ZNF720Q7Z2F6 126 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 DEFB124Q8NES8 71 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 PDCD10Q9BUL8 212 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 CFAP43Q8NDM7 1665 aa-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 RNF17Q9BXT8 1623 aaKnown RBP-2.57□□□□□ -2.82
CDKL5-210ENST00000636046 ERICH2A1L162 156 aa-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 ATP5EP56381 51 aaPredicted RBP-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 TMEM35BQ8NCS4 154 aa-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 CCDC42Q96M95 316 aa-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 SMIM2Q9BVW6 85 aa-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 NMES1Q9C002 83 aa-2.58□□□□□ -2.82
CDKL5-210ENST00000636046 LINC00694P0DN24 101 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 KRTDAPP60985 99 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 GNG3P63215 75 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 SARNPP82979 210 aaKnown RBP-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 CATR1Q13166 79 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 SMIM20Q8N5G0 67 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 DIP2AQ14689 1571 aa-2.59□□□□□ -2.82
CDKL5-210ENST00000636046 MADDQ8WXG6 1647 aa-2.6□□□□□ -2.83
CDKL5-210ENST00000636046 TRAV36DV7A0A075B6V5 113 aa-2.6□□□□□ -2.83
CDKL5-210ENST00000636046 RPP14O95059 124 aaKnown RBP-2.6□□□□□ -2.83
CDKL5-210ENST00000636046 NREPQ16612 68 aa-2.6□□□□□ -2.83
CDKL5-210ENST00000636046 GINS2Q9Y248 185 aa-2.6□□□□□ -2.83
CDKL5-210ENST00000636046 EPRSP07814 1512 aaKnown RBP-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 DUOX2Q9NRD8 1548 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 APOC2P02655 101 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 LSM6P62312 80 aaKnown RBP-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 SMCO1Q147U7 214 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 FAM9CQ8IZT9 166 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 PCBD2Q9H0N5 130 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 RALGAPBQ86X10 1494 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 ALS2Q96Q42 1657 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 NRKQ7Z2Y5 1582 aa-2.61□□□□□ -2.83
CDKL5-210ENST00000636046 ABCC6O95255 1503 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 J3QR89 54 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 K7ERU9 68 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 YKT6O15498 198 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 G0S2P27469 103 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 LINC01590Q5TEZ4 76 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 CCDC167Q9P0B6 97 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 ARFGEF2Q9Y6D5 1785 aa-2.62□□□□□ -2.83
CDKL5-210ENST00000636046 CCDC172P0C7W6 258 aa-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 COPZ1P61923 177 aa-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 PMCHL2Q9BQD1 86 aa-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 AIF1LQ9BQI0 150 aa-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 PAIP2BQ9ULR5 123 aaKnown RBP-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 UNC13AQ9UPW8 1703 aa-2.63□□□□□ -2.83
CDKL5-210ENST00000636046 TIAM1Q13009 1591 aa-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 H3BUT2 72 aa-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 HMGN2P05204 90 aaKnown RBP-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 RPS25P62851 125 aaKnown RBP-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 PEA15Q15121 130 aa-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 URB2Q14146 1524 aaKnown RBP-2.64□□□□□ -2.83
CDKL5-210ENST00000636046 LINC00308Q8TCZ7 52 aa-2.65□□□□□ -2.83
CDKL5-210ENST00000636046 MROH2AA6NES4 1674 aa-2.66□□□□□ -2.83
CDKL5-210ENST00000636046 LMTK2Q8IWU2 1503 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 KDM5DQ9BY66 1539 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 GYPAP02724 150 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 CKS1BP61024 79 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 CCL7P80098 99 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 MORN2Q502X0 79 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 LZICQ8WZA0 190 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 SMIM3Q9BZL3 60 aa-2.66□□□□□ -2.84
CDKL5-210ENST00000636046 TDRG1Q3Y452 100 aa-2.67□□□□□ -2.84
CDKL5-210ENST00000636046 TOMM20LQ6UXN7 152 aa-2.67□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms