RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KRTAP13-3Q3SY46 172 aa8.77□□□□□ -1.01
CACNA1A-220ENST00000635988 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
CACNA1A-220ENST00000635988 NBEAL1Q6ZS30 2694 aa8.76□□□□□ -1.01
CACNA1A-220ENST00000635988 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
CACNA1A-220ENST00000635988 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
CACNA1A-220ENST00000635988 Q5W150 140 aa8.76□□□□□ -1.01
CACNA1A-220ENST00000635988 FBN1P35555 2871 aaKnown RBP8.75□□□□□ -1.01
CACNA1A-220ENST00000635988 DNAH9Q9NYC9 4486 aa8.75□□□□□ -1.01
CACNA1A-220ENST00000635988 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CACNA1A-220ENST00000635988 ANAPC11Q9NYG5 84 aa8.72□□□□□ -1.01
CACNA1A-220ENST00000635988 NUPR2A6NF83 97 aa8.71□□□□□ -1.02
CACNA1A-220ENST00000635988 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
CACNA1A-220ENST00000635988 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
CACNA1A-220ENST00000635988 A0A087WTM6 91 aa8.7□□□□□ -1.02
CACNA1A-220ENST00000635988 LYSTQ99698 3801 aa8.7□□□□□ -1.02
CACNA1A-220ENST00000635988 RTL8CO15255 209 aa8.67□□□□□ -1.02
CACNA1A-220ENST00000635988 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
CACNA1A-220ENST00000635988 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
CACNA1A-220ENST00000635988 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
CACNA1A-220ENST00000635988 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
CACNA1A-220ENST00000635988 LINC00313P59037 77 aa8.63□□□□□ -1.03
CACNA1A-220ENST00000635988 A0A1B0GU69 56 aa8.63□□□□□ -1.03
CACNA1A-220ENST00000635988 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
CACNA1A-220ENST00000635988 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
CACNA1A-220ENST00000635988 IGKV2-30P06310 120 aa8.58□□□□□ -1.04
CACNA1A-220ENST00000635988 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
CACNA1A-220ENST00000635988 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
CACNA1A-220ENST00000635988 COL7A1Q02388 2944 aa8.55□□□□□ -1.04
CACNA1A-220ENST00000635988 PRAC1Q96KF2 57 aa8.55□□□□□ -1.04
CACNA1A-220ENST00000635988 CSMD3Q7Z407 3707 aa8.55□□□□□ -1.04
CACNA1A-220ENST00000635988 UQCR11O14957 56 aa8.53□□□□□ -1.04
CACNA1A-220ENST00000635988 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
CACNA1A-220ENST00000635988 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
CACNA1A-220ENST00000635988 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
CACNA1A-220ENST00000635988 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
CACNA1A-220ENST00000635988 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
CACNA1A-220ENST00000635988 RETNLBQ9BQ08 111 aa8.49□□□□□ -1.05
CACNA1A-220ENST00000635988 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
CACNA1A-220ENST00000635988 ADM2Q7Z4H4 148 aa8.47□□□□□ -1.05
CACNA1A-220ENST00000635988 PLECQ15149 4684 aaKnown RBP8.46□□□□□ -1.06
CACNA1A-220ENST00000635988 KRTAP16-1A8MUX0 517 aa8.45□□□□□ -1.06
CACNA1A-220ENST00000635988 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
CACNA1A-220ENST00000635988 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
CACNA1A-220ENST00000635988 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
CACNA1A-220ENST00000635988 FRAS1Q86XX4 4008 aa8.4□□□□□ -1.07
CACNA1A-220ENST00000635988 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
CACNA1A-220ENST00000635988 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
CACNA1A-220ENST00000635988 HECTD4Q9Y4D8 3996 aa8.38□□□□□ -1.07
CACNA1A-220ENST00000635988 DNAH17Q9UFH2 4485 aa8.35□□□□□ -1.07
CACNA1A-220ENST00000635988 STARD9Q9P2P6 4700 aa8.27□□□□□ -1.09
CACNA1A-220ENST00000635988 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
CACNA1A-220ENST00000635988 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
CACNA1A-220ENST00000635988 SPINK1P00995 79 aa8.24□□□□□ -1.09
CACNA1A-220ENST00000635988 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
CACNA1A-220ENST00000635988 LY6G6CO95867 125 aa8.24□□□□□ -1.09
CACNA1A-220ENST00000635988 Q6ZSA8 131 aa8.24□□□□□ -1.09
CACNA1A-220ENST00000635988 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
CACNA1A-220ENST00000635988 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
CACNA1A-220ENST00000635988 FBN3Q75N90 2809 aa8.22□□□□□ -1.09
CACNA1A-220ENST00000635988 MEGF8Q7Z7M0 2845 aa8.21□□□□□ -1.09
CACNA1A-220ENST00000635988 Q8N1X5 172 aa8.2□□□□□ -1.1
CACNA1A-220ENST00000635988 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
CACNA1A-220ENST00000635988 KMT2AQ03164 3969 aa8.18□□□□□ -1.1
CACNA1A-220ENST00000635988 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
CACNA1A-220ENST00000635988 TGP01266 2768 aa8.15□□□□□ -1.1
CACNA1A-220ENST00000635988 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
CACNA1A-220ENST00000635988 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
CACNA1A-220ENST00000635988 A8MUU9 505 aa8.11□□□□□ -1.11
CACNA1A-220ENST00000635988 H0YAA0 97 aa8.11□□□□□ -1.11
CACNA1A-220ENST00000635988 A0A1B0GU33 70 aa8.08□□□□□ -1.12
CACNA1A-220ENST00000635988 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
CACNA1A-220ENST00000635988 DNAH6Q9C0G6 4158 aa8.05□□□□□ -1.12
CACNA1A-220ENST00000635988 DNAH5Q8TE73 4624 aa8.05□□□□□ -1.12
CACNA1A-220ENST00000635988 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
CACNA1A-220ENST00000635988 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
CACNA1A-220ENST00000635988 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
CACNA1A-220ENST00000635988 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
CACNA1A-220ENST00000635988 ROMO1P60602 79 aa7.99□□□□□ -1.13
CACNA1A-220ENST00000635988 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
CACNA1A-220ENST00000635988 K7ERS5 55 aa7.97□□□□□ -1.13
CACNA1A-220ENST00000635988 J3QL48 77 aa7.96□□□□□ -1.14
CACNA1A-220ENST00000635988 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
CACNA1A-220ENST00000635988 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.15
CACNA1A-220ENST00000635988 PKD1P98161 4303 aa7.89□□□□□ -1.15
CACNA1A-220ENST00000635988 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
CACNA1A-220ENST00000635988 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
CACNA1A-220ENST00000635988 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
CACNA1A-220ENST00000635988 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
CACNA1A-220ENST00000635988 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
CACNA1A-220ENST00000635988 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
CACNA1A-220ENST00000635988 RPL37P61927 97 aaKnown RBP7.75□□□□□ -1.17
CACNA1A-220ENST00000635988 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
CACNA1A-220ENST00000635988 P0C880 135 aa7.72□□□□□ -1.17
CACNA1A-220ENST00000635988 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
CACNA1A-220ENST00000635988 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
CACNA1A-220ENST00000635988 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
CACNA1A-220ENST00000635988 HYDINQ4G0P3 5121 aa7.66□□□□□ -1.18
CACNA1A-220ENST00000635988 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.19
CACNA1A-220ENST00000635988 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
CACNA1A-220ENST00000635988 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms