RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ABCA13Q86UQ4 5058 aa9.46□□□□□ -0.89
CLN8-209ENST00000635970 Q5VSD8 79 aa9.46□□□□□ -0.9
CLN8-209ENST00000635970 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
CLN8-209ENST00000635970 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
CLN8-209ENST00000635970 A8MWP4 228 aa9.45□□□□□ -0.9
CLN8-209ENST00000635970 LINC00208Q96KT6 92 aa9.45□□□□□ -0.9
CLN8-209ENST00000635970 PRLHP81277 87 aa9.44□□□□□ -0.9
CLN8-209ENST00000635970 H0Y9P7 68 aa9.43□□□□□ -0.9
CLN8-209ENST00000635970 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
CLN8-209ENST00000635970 LINC00472Q9H8W2 130 aa9.42□□□□□ -0.9
CLN8-209ENST00000635970 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
CLN8-209ENST00000635970 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
CLN8-209ENST00000635970 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
CLN8-209ENST00000635970 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
CLN8-209ENST00000635970 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
CLN8-209ENST00000635970 PRR4Q16378 134 aa9.39□□□□□ -0.91
CLN8-209ENST00000635970 PSPHP1O15172 72 aa9.39□□□□□ -0.91
CLN8-209ENST00000635970 RPL37AP61513 92 aaKnown RBP9.39□□□□□ -0.91
CLN8-209ENST00000635970 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
CLN8-209ENST00000635970 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
CLN8-209ENST00000635970 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
CLN8-209ENST00000635970 TP53AIP1Q9HCN2 124 aa9.34□□□□□ -0.91
CLN8-209ENST00000635970 PMAIP1Q13794 54 aa9.33□□□□□ -0.92
CLN8-209ENST00000635970 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
CLN8-209ENST00000635970 A8MUN3 132 aa9.33□□□□□ -0.92
CLN8-209ENST00000635970 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CLN8-209ENST00000635970 IGLV7-46A0A075B6I9 117 aa9.32□□□□□ -0.92
CLN8-209ENST00000635970 Q5VV11 94 aa9.32□□□□□ -0.92
CLN8-209ENST00000635970 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
CLN8-209ENST00000635970 MMP24-AS1A0A0U1RRL7 71 aa9.3□□□□□ -0.92
CLN8-209ENST00000635970 MOBPQ13875 183 aa9.28□□□□□ -0.92
CLN8-209ENST00000635970 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
CLN8-209ENST00000635970 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
CLN8-209ENST00000635970 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
CLN8-209ENST00000635970 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
CLN8-209ENST00000635970 SEC61GP60059 68 aa9.25□□□□□ -0.93
CLN8-209ENST00000635970 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
CLN8-209ENST00000635970 CHKB-CPT1BH3BT56 60 aa9.24□□□□□ -0.93
CLN8-209ENST00000635970 Q75L30 129 aa9.24□□□□□ -0.93
CLN8-209ENST00000635970 COA5Q86WW8 74 aa9.24□□□□□ -0.93
CLN8-209ENST00000635970 FLG2Q5D862 2391 aaPredicted RBP9.24□□□□□ -0.93
CLN8-209ENST00000635970 PRR15LQ9BU68 103 aa9.22□□□□□ -0.93
CLN8-209ENST00000635970 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
CLN8-209ENST00000635970 Q96NJ1 140 aa9.2□□□□□ -0.94
CLN8-209ENST00000635970 LINC00483Q53H64 154 aa9.19□□□□□ -0.94
CLN8-209ENST00000635970 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
CLN8-209ENST00000635970 FAT3Q8TDW7 4589 aa9.18□□□□□ -0.94
CLN8-209ENST00000635970 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
CLN8-209ENST00000635970 ATP11AUNQ6ZP68 121 aa9.17□□□□□ -0.94
CLN8-209ENST00000635970 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
CLN8-209ENST00000635970 LINC01558Q9Y6Z2 57 aa9.15□□□□□ -0.94
CLN8-209ENST00000635970 A0A1B0GVX0 72 aa9.15□□□□□ -0.95
CLN8-209ENST00000635970 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
CLN8-209ENST00000635970 CD164Q04900 197 aa9.13□□□□□ -0.95
CLN8-209ENST00000635970 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
CLN8-209ENST00000635970 A6NED7 52 aa9.12□□□□□ -0.95
CLN8-209ENST00000635970 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
CLN8-209ENST00000635970 PCOTHQ58A44 107 aa9.11□□□□□ -0.95
CLN8-209ENST00000635970 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
CLN8-209ENST00000635970 ZNF861PO60384 105 aa9.1□□□□□ -0.95
CLN8-209ENST00000635970 LCA10Q71F78 164 aa9.08□□□□□ -0.96
CLN8-209ENST00000635970 KTN1-AS1Q86SY8 53 aa9.08□□□□□ -0.96
CLN8-209ENST00000635970 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
CLN8-209ENST00000635970 NDUFS5O43920 106 aa9.07□□□□□ -0.96
CLN8-209ENST00000635970 A8MU10 97 aa9.06□□□□□ -0.96
CLN8-209ENST00000635970 TNXBP22105 4242 aa9.04□□□□□ -0.96
CLN8-209ENST00000635970 HRES1P13985 223 aa9.03□□□□□ -0.96
CLN8-209ENST00000635970 SPAG11AQ6PDA7 123 aa9.03□□□□□ -0.96
CLN8-209ENST00000635970 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
CLN8-209ENST00000635970 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
CLN8-209ENST00000635970 J3QL48 77 aa9.01□□□□□ -0.97
CLN8-209ENST00000635970 KRTAP1-4P0C5Y4 121 aa9.01□□□□□ -0.97
CLN8-209ENST00000635970 MT1HL1P0DM35 61 aa9□□□□□ -0.97
CLN8-209ENST00000635970 HERC1Q15751 4861 aa8.99□□□□□ -0.97
CLN8-209ENST00000635970 A6NN06 94 aa8.99□□□□□ -0.97
CLN8-209ENST00000635970 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
CLN8-209ENST00000635970 PRR26Q8N8Z3 221 aa8.95□□□□□ -0.98
CLN8-209ENST00000635970 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
CLN8-209ENST00000635970 ACYP2P14621 99 aa8.95□□□□□ -0.98
CLN8-209ENST00000635970 KRTAP13-3Q3SY46 172 aa8.93□□□□□ -0.98
CLN8-209ENST00000635970 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
CLN8-209ENST00000635970 A0A087X002 238 aa8.92□□□□□ -0.98
CLN8-209ENST00000635970 NOTCH2NLQ7Z3S9 236 aa8.92□□□□□ -0.98
CLN8-209ENST00000635970 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
CLN8-209ENST00000635970 SPINK7P58062 85 aa8.88□□□□□ -0.99
CLN8-209ENST00000635970 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
CLN8-209ENST00000635970 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
CLN8-209ENST00000635970 Q5W150 140 aa8.87□□□□□ -0.99
CLN8-209ENST00000635970 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
CLN8-209ENST00000635970 RBM12B-AS1Q9P1G2 102 aa8.85□□□□□ -0.99
CLN8-209ENST00000635970 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
CLN8-209ENST00000635970 LINC00313P59037 77 aa8.79□□□□□ -1
CLN8-209ENST00000635970 IGKV2-30P06310 120 aa8.75□□□□□ -1.01
CLN8-209ENST00000635970 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
CLN8-209ENST00000635970 A0A1B0GU69 56 aa8.73□□□□□ -1.01
CLN8-209ENST00000635970 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
CLN8-209ENST00000635970 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
CLN8-209ENST00000635970 UQCR11O14957 56 aa8.65□□□□□ -1.02
CLN8-209ENST00000635970 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
CLN8-209ENST00000635970 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms