RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ACYP1P07311 99 aa5.35□□□□□ -1.55
LINC00339-210ENST00000635675 FAM240AA0A1B0GVK7 77 aa5.34□□□□□ -1.55
LINC00339-210ENST00000635675 Q6ZVQ6 151 aa5.33□□□□□ -1.56
LINC00339-210ENST00000635675 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
LINC00339-210ENST00000635675 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
LINC00339-210ENST00000635675 IGKV3D-7A0A0C4DH55 119 aa5.32□□□□□ -1.56
LINC00339-210ENST00000635675 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
LINC00339-210ENST00000635675 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
LINC00339-210ENST00000635675 NREPQ16612 68 aa5.31□□□□□ -1.56
LINC00339-210ENST00000635675 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
LINC00339-210ENST00000635675 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
LINC00339-210ENST00000635675 MT-ATP8P03928 68 aa5.31□□□□□ -1.56
LINC00339-210ENST00000635675 Q96NJ1 140 aa5.3□□□□□ -1.56
LINC00339-210ENST00000635675 MUC2Q02817 5179 aa5.3□□□□□ -1.56
LINC00339-210ENST00000635675 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
LINC00339-210ENST00000635675 LINC00643Q86TS7 51 aa5.28□□□□□ -1.56
LINC00339-210ENST00000635675 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
LINC00339-210ENST00000635675 BPY2O14599 106 aa5.26□□□□□ -1.57
LINC00339-210ENST00000635675 Q8N9L7 120 aa5.26□□□□□ -1.57
LINC00339-210ENST00000635675 SIGMAR1Q99720 223 aa5.26□□□□□ -1.57
LINC00339-210ENST00000635675 A0A1B0GW54 56 aa5.25□□□□□ -1.57
LINC00339-210ENST00000635675 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
LINC00339-210ENST00000635675 HIST1H4AP62805 103 aaKnown RBP5.24□□□□□ -1.57
LINC00339-210ENST00000635675 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
LINC00339-210ENST00000635675 IGKV4-1P06312 121 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 A0A087WVE0 104 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
LINC00339-210ENST00000635675 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 ATP5EP2Q5VTU8 51 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
LINC00339-210ENST00000635675 K7EQZ3 153 aa5.21□□□□□ -1.58
LINC00339-210ENST00000635675 DSCR10P59022 87 aa5.21□□□□□ -1.58
LINC00339-210ENST00000635675 CXCL6P80162 114 aa5.2□□□□□ -1.58
LINC00339-210ENST00000635675 A0A0U1RQV1 116 aa5.19□□□□□ -1.58
LINC00339-210ENST00000635675 Q75L30 129 aa5.19□□□□□ -1.58
LINC00339-210ENST00000635675 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
LINC00339-210ENST00000635675 J3KT08 172 aa5.17□□□□□ -1.58
LINC00339-210ENST00000635675 LINC00313P59037 77 aa5.17□□□□□ -1.58
LINC00339-210ENST00000635675 A8MUU9 505 aa5.16□□□□□ -1.58
LINC00339-210ENST00000635675 A8MWP4 228 aa5.16□□□□□ -1.58
LINC00339-210ENST00000635675 NOTCH2NLQ7Z3S9 236 aa5.16□□□□□ -1.58
LINC00339-210ENST00000635675 WFDC13Q8IUB5 93 aa5.16□□□□□ -1.58
LINC00339-210ENST00000635675 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
LINC00339-210ENST00000635675 FAM236AA0A1B0GUQ0 79 aa5.15□□□□□ -1.58
LINC00339-210ENST00000635675 FAM236BA0A1B0GV22 79 aa5.15□□□□□ -1.58
LINC00339-210ENST00000635675 A0A1B0GVX0 72 aa5.15□□□□□ -1.58
LINC00339-210ENST00000635675 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.58
LINC00339-210ENST00000635675 NDUFB1O75438 58 aa5.15□□□□□ -1.58
LINC00339-210ENST00000635675 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
LINC00339-210ENST00000635675 KRTAP4-8A0A0G2JLE6 195 aa5.14□□□□□ -1.59
LINC00339-210ENST00000635675 PRR15Q8IV56 129 aa5.14□□□□□ -1.59
LINC00339-210ENST00000635675 IMUPQ9GZP8 106 aa5.13□□□□□ -1.59
LINC00339-210ENST00000635675 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
LINC00339-210ENST00000635675 C8orf87E5RJ46 101 aa5.12□□□□□ -1.59
LINC00339-210ENST00000635675 C8orf17Q9NRJ1 99 aa5.12□□□□□ -1.59
LINC00339-210ENST00000635675 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
LINC00339-210ENST00000635675 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
LINC00339-210ENST00000635675 SCGB1A1P11684 91 aa5.1□□□□□ -1.59
LINC00339-210ENST00000635675 KRTAP19-2Q3LHN2 52 aa5.1□□□□□ -1.59
LINC00339-210ENST00000635675 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
LINC00339-210ENST00000635675 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
LINC00339-210ENST00000635675 hDV103S1A0JD37 113 aa5.07□□□□□ -1.6
LINC00339-210ENST00000635675 NDUFS5O43920 106 aa5.07□□□□□ -1.6
LINC00339-210ENST00000635675 ATOX1O00244 68 aa5.05□□□□□ -1.6
LINC00339-210ENST00000635675 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
LINC00339-210ENST00000635675 TMEM254Q8TBM7 123 aa5.05□□□□□ -1.6
LINC00339-210ENST00000635675 MRPL34Q9BQ48 92 aaKnown RBP5.05□□□□□ -1.6
LINC00339-210ENST00000635675 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
LINC00339-210ENST00000635675 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
LINC00339-210ENST00000635675 MT1HP80294 61 aa4.99□□□□□ -1.61
LINC00339-210ENST00000635675 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
LINC00339-210ENST00000635675 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
LINC00339-210ENST00000635675 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
LINC00339-210ENST00000635675 KRTAP4-7Q9BYR0 210 aa4.97□□□□□ -1.61
LINC00339-210ENST00000635675 PCP4P48539 62 aa4.97□□□□□ -1.61
LINC00339-210ENST00000635675 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
LINC00339-210ENST00000635675 H0Y9P7 68 aa4.96□□□□□ -1.62
LINC00339-210ENST00000635675 SMIM20Q8N5G0 67 aa4.96□□□□□ -1.62
LINC00339-210ENST00000635675 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 UQCRQO14949 82 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 HRES1P13985 223 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 COX7CP15954 63 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
LINC00339-210ENST00000635675 SPINK7P58062 85 aa4.94□□□□□ -1.62
LINC00339-210ENST00000635675 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
LINC00339-210ENST00000635675 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
LINC00339-210ENST00000635675 SNURFQ9Y675 71 aa4.93□□□□□ -1.62
LINC00339-210ENST00000635675 Q5W150 140 aa4.92□□□□□ -1.62
LINC00339-210ENST00000635675 TRAV22A0A0B4J277 110 aa4.91□□□□□ -1.62
LINC00339-210ENST00000635675 MP68P56378 58 aa4.9□□□□□ -1.62
LINC00339-210ENST00000635675 LINC00208Q96KT6 92 aa4.9□□□□□ -1.62
LINC00339-210ENST00000635675 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
LINC00339-210ENST00000635675 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
LINC00339-210ENST00000635675 M0R2T5 61 aa4.89□□□□□ -1.63
LINC00339-210ENST00000635675 C5orf47Q569G3 176 aa4.89□□□□□ -1.63
LINC00339-210ENST00000635675 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
LINC00339-210ENST00000635675 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms