RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 HIVEP1P15822 2718 aa3.56□□□□□ -1.84
TCF4-268ENST00000629387 CELSR2Q9HCU4 2923 aa3.55□□□□□ -1.84
TCF4-268ENST00000629387 GIG44P09565 113 aaPredicted RBP3.55□□□□□ -1.84
TCF4-268ENST00000629387 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
TCF4-268ENST00000629387 HRNRQ86YZ3 2850 aaPredicted RBP3.53□□□□□ -1.84
TCF4-268ENST00000629387 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
TCF4-268ENST00000629387 A0A1B0GU33 70 aa3.53□□□□□ -1.84
TCF4-268ENST00000629387 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
TCF4-268ENST00000629387 NIPBLQ6KC79 2804 aaeCLIP3.53□□□□□ -1.84
TCF4-268ENST00000629387 A0A0G2JQZ4 141 aa3.53□□□□□ -1.84
TCF4-268ENST00000629387 LY6G6CO95867 125 aa3.52□□□□□ -1.85
TCF4-268ENST00000629387 A0A1B0GUV1 79 aa3.51□□□□□ -1.85
TCF4-268ENST00000629387 IGLV6-57P01721 117 aa3.51□□□□□ -1.85
TCF4-268ENST00000629387 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
TCF4-268ENST00000629387 R4GN34 69 aa3.51□□□□□ -1.85
TCF4-268ENST00000629387 TP53AIP1Q9HCN2 124 aa3.5□□□□□ -1.85
TCF4-268ENST00000629387 PSORS1C2Q9UIG4 136 aa3.5□□□□□ -1.85
TCF4-268ENST00000629387 XP32Q5T750 250 aa3.49□□□□□ -1.85
TCF4-268ENST00000629387 A0A096LNI7 61 aa3.49□□□□□ -1.85
TCF4-268ENST00000629387 CSMD2Q7Z408 3487 aa3.49□□□□□ -1.85
TCF4-268ENST00000629387 CELSR1Q9NYQ6 3014 aa3.49□□□□□ -1.85
TCF4-268ENST00000629387 KRTAP10-11P60412 298 aa3.47□□□□□ -1.85
TCF4-268ENST00000629387 Q6ZRX8 168 aa3.47□□□□□ -1.85
TCF4-268ENST00000629387 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
TCF4-268ENST00000629387 KRTAP29-1A8MX34 341 aaPredicted RBP3.45□□□□□ -1.86
TCF4-268ENST00000629387 K7EIL1 84 aa3.45□□□□□ -1.86
TCF4-268ENST00000629387 MXRA5Q9NR99 2828 aa3.45□□□□□ -1.86
TCF4-268ENST00000629387 PRKDCP78527 4128 aaKnown RBP3.45□□□□□ -1.86
TCF4-268ENST00000629387 LINC01556Q5JQF7 62 aa3.44□□□□□ -1.86
TCF4-268ENST00000629387 IGLV5-48A0A075B6I7 105 aa3.44□□□□□ -1.86
TCF4-268ENST00000629387 SPINK1P00995 79 aa3.43□□□□□ -1.86
TCF4-268ENST00000629387 STAB2Q8WWQ8 2551 aa3.43□□□□□ -1.86
TCF4-268ENST00000629387 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
TCF4-268ENST00000629387 H3BNG1 76 aa3.42□□□□□ -1.86
TCF4-268ENST00000629387 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
TCF4-268ENST00000629387 PRLHP81277 87 aa3.41□□□□□ -1.86
TCF4-268ENST00000629387 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
TCF4-268ENST00000629387 ZNF469Q96JG9 3925 aaPredicted RBP3.4□□□□□ -1.86
TCF4-268ENST00000629387 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.86
TCF4-268ENST00000629387 PRO2289Q9P1D8 64 aa3.4□□□□□ -1.87
TCF4-268ENST00000629387 KRTAP3-1Q9BYR8 98 aa3.38□□□□□ -1.87
TCF4-268ENST00000629387 TPRXLQ17RH7 258 aa3.38□□□□□ -1.87
TCF4-268ENST00000629387 SPACA4Q8TDM5 124 aa3.38□□□□□ -1.87
TCF4-268ENST00000629387 CUBNO60494 3623 aa3.38□□□□□ -1.87
TCF4-268ENST00000629387 SPINK6Q6UWN8 80 aa3.36□□□□□ -1.87
TCF4-268ENST00000629387 AKAP9Q99996 3911 aa3.36□□□□□ -1.87
TCF4-268ENST00000629387 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
TCF4-268ENST00000629387 GVQW2A0A096LPI5 108 aaPredicted RBP3.34□□□□□ -1.87
TCF4-268ENST00000629387 MMP24-AS1A0A0U1RRL7 71 aa3.34□□□□□ -1.87
TCF4-268ENST00000629387 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
TCF4-268ENST00000629387 H0YAA0 97 aa3.33□□□□□ -1.88
TCF4-268ENST00000629387 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
TCF4-268ENST00000629387 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
TCF4-268ENST00000629387 HUWE1Q7Z6Z7 4374 aaKnown RBP3.33□□□□□ -1.88
TCF4-268ENST00000629387 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
TCF4-268ENST00000629387 RYR3Q15413 4870 aa3.32□□□□□ -1.88
TCF4-268ENST00000629387 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
TCF4-268ENST00000629387 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
TCF4-268ENST00000629387 APLNQ9ULZ1 77 aa3.3□□□□□ -1.88
TCF4-268ENST00000629387 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
TCF4-268ENST00000629387 Q6ZSA8 131 aa3.29□□□□□ -1.88
TCF4-268ENST00000629387 PDZD2O15018 2839 aa3.27□□□□□ -1.89
TCF4-268ENST00000629387 VWFP04275 2813 aa3.27□□□□□ -1.89
TCF4-268ENST00000629387 SRRM2Q9UQ35 2752 aaKnown RBP3.27□□□□□ -1.89
TCF4-268ENST00000629387 TENM3Q9P273 2699 aa3.26□□□□□ -1.89
TCF4-268ENST00000629387 PKD1L1Q8TDX9 2849 aa3.26□□□□□ -1.89
TCF4-268ENST00000629387 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
TCF4-268ENST00000629387 ANK3Q12955 4377 aaKnown RBP3.25□□□□□ -1.89
TCF4-268ENST00000629387 RPL37P61927 97 aaKnown RBP3.25□□□□□ -1.89
TCF4-268ENST00000629387 A0A0D9SG42 100 aa3.23□□□□□ -1.89
TCF4-268ENST00000629387 KRTAP1-5Q9BYS1 174 aa3.23□□□□□ -1.89
TCF4-268ENST00000629387 SMR3BP02814 79 aaPredicted RBP3.22□□□□□ -1.89
TCF4-268ENST00000629387 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
TCF4-268ENST00000629387 IGKV2D-30A0A075B6S6 120 aa3.21□□□□□ -1.9
TCF4-268ENST00000629387 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
TCF4-268ENST00000629387 TGP01266 2768 aa3.17□□□□□ -1.9
TCF4-268ENST00000629387 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
TCF4-268ENST00000629387 ANK2Q01484 3957 aa3.15□□□□□ -1.9
TCF4-268ENST00000629387 HERC2O95714 4834 aa3.15□□□□□ -1.9
TCF4-268ENST00000629387 INE1O15225 51 aa3.14□□□□□ -1.91
TCF4-268ENST00000629387 Q6ZRN7 208 aaPredicted RBP3.13□□□□□ -1.91
TCF4-268ENST00000629387 ALMS1Q8TCU4 4167 aa3.13□□□□□ -1.91
TCF4-268ENST00000629387 COX6B2Q6YFQ2 88 aa3.12□□□□□ -1.91
TCF4-268ENST00000629387 TRRAPQ9Y4A5 3859 aa3.12□□□□□ -1.91
TCF4-268ENST00000629387 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
TCF4-268ENST00000629387 SPRR1AP35321 89 aa3.11□□□□□ -1.91
TCF4-268ENST00000629387 KRTAP9-6A0A140TA67 174 aa3.11□□□□□ -1.91
TCF4-268ENST00000629387 KRTAP10-2P60368 255 aa3.11□□□□□ -1.91
TCF4-268ENST00000629387 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
TCF4-268ENST00000629387 DNAH3Q8TD57 4116 aa3.09□□□□□ -1.91
TCF4-268ENST00000629387 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
TCF4-268ENST00000629387 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
TCF4-268ENST00000629387 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
TCF4-268ENST00000629387 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
TCF4-268ENST00000629387 C9orf92A6NGG3 77 aa3.07□□□□□ -1.92
TCF4-268ENST00000629387 EPPK1P58107 5090 aaKnown RBP3.07□□□□□ -1.92
TCF4-268ENST00000629387 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
TCF4-268ENST00000629387 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
TCF4-268ENST00000629387 DYNC2H1Q8NCM8 4307 aaKnown RBP3.04□□□□□ -1.92
TCF4-268ENST00000629387 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms