RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 KRTAP9-2Q9BYQ4 174 aa7.45□□□□□ -1.22
PNKP-223ENST00000629179 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
PNKP-223ENST00000629179 A8MUU9 505 aa7.44□□□□□ -1.22
PNKP-223ENST00000629179 MT1HP80294 61 aa7.43□□□□□ -1.22
PNKP-223ENST00000629179 C9JAW5 83 aa7.42□□□□□ -1.22
PNKP-223ENST00000629179 LINC00313P59037 77 aa7.42□□□□□ -1.22
PNKP-223ENST00000629179 NOTCH2NLQ7Z3S9 236 aa7.41□□□□□ -1.22
PNKP-223ENST00000629179 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
PNKP-223ENST00000629179 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
PNKP-223ENST00000629179 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
PNKP-223ENST00000629179 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
PNKP-223ENST00000629179 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
PNKP-223ENST00000629179 Q6ZQT0 140 aa7.36□□□□□ -1.23
PNKP-223ENST00000629179 LOC110117498A0A087WWA1 95 aa7.34□□□□□ -1.23
PNKP-223ENST00000629179 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
PNKP-223ENST00000629179 MTURNQ8N3F0 131 aa7.34□□□□□ -1.23
PNKP-223ENST00000629179 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
PNKP-223ENST00000629179 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
PNKP-223ENST00000629179 C14orf132Q9NPU4 83 aa7.33□□□□□ -1.24
PNKP-223ENST00000629179 ACYP1P07311 99 aa7.32□□□□□ -1.24
PNKP-223ENST00000629179 FAM240AA0A1B0GVK7 77 aa7.31□□□□□ -1.24
PNKP-223ENST00000629179 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
PNKP-223ENST00000629179 J3KT08 172 aa7.3□□□□□ -1.24
PNKP-223ENST00000629179 M0R2T5 61 aa7.3□□□□□ -1.24
PNKP-223ENST00000629179 PDE6GP18545 87 aa7.3□□□□□ -1.24
PNKP-223ENST00000629179 A0A1B0GW54 56 aa7.28□□□□□ -1.24
PNKP-223ENST00000629179 PCP4P48539 62 aa7.28□□□□□ -1.24
PNKP-223ENST00000629179 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
PNKP-223ENST00000629179 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.24
PNKP-223ENST00000629179 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
PNKP-223ENST00000629179 LCE2DQ5TA82 110 aaPredicted RBP7.26□□□□□ -1.25
PNKP-223ENST00000629179 NDUFB1O75438 58 aa7.25□□□□□ -1.25
PNKP-223ENST00000629179 A8MWP4 228 aa7.23□□□□□ -1.25
PNKP-223ENST00000629179 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
PNKP-223ENST00000629179 NREPQ16612 68 aa7.22□□□□□ -1.25
PNKP-223ENST00000629179 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.26
PNKP-223ENST00000629179 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
PNKP-223ENST00000629179 HRES1P13985 223 aa7.18□□□□□ -1.26
PNKP-223ENST00000629179 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
PNKP-223ENST00000629179 KRTAP9-6A0A140TA67 174 aa7.17□□□□□ -1.26
PNKP-223ENST00000629179 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
PNKP-223ENST00000629179 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
PNKP-223ENST00000629179 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.26
PNKP-223ENST00000629179 FAM236CP0DP71 79 aa7.15□□□□□ -1.26
PNKP-223ENST00000629179 Q6ZVQ6 151 aa7.15□□□□□ -1.26
PNKP-223ENST00000629179 LINC00643Q86TS7 51 aa7.15□□□□□ -1.26
PNKP-223ENST00000629179 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.26
PNKP-223ENST00000629179 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
PNKP-223ENST00000629179 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
PNKP-223ENST00000629179 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
PNKP-223ENST00000629179 K7EQZ3 153 aa7.11□□□□□ -1.27
PNKP-223ENST00000629179 SPINK7P58062 85 aa7.11□□□□□ -1.27
PNKP-223ENST00000629179 BPY2O14599 106 aa7.09□□□□□ -1.27
PNKP-223ENST00000629179 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
PNKP-223ENST00000629179 MRPL34Q9BQ48 92 aaKnown RBP7.08□□□□□ -1.28
PNKP-223ENST00000629179 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
PNKP-223ENST00000629179 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
PNKP-223ENST00000629179 KRTAP9-8Q9BYQ0 159 aa7.05□□□□□ -1.28
PNKP-223ENST00000629179 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
PNKP-223ENST00000629179 Q8N9L7 120 aa7.04□□□□□ -1.28
PNKP-223ENST00000629179 NDUFS5O43920 106 aa7.03□□□□□ -1.28
PNKP-223ENST00000629179 UBL5Q9BZL1 73 aa7.03□□□□□ -1.28
PNKP-223ENST00000629179 ANAPC13Q9BS18 74 aa7.02□□□□□ -1.29
PNKP-223ENST00000629179 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
PNKP-223ENST00000629179 LINC00846Q9NV44 126 aa7.01□□□□□ -1.29
PNKP-223ENST00000629179 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
PNKP-223ENST00000629179 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
PNKP-223ENST00000629179 MT2AP02795 61 aa6.96□□□□□ -1.3
PNKP-223ENST00000629179 Q5W150 140 aa6.96□□□□□ -1.3
PNKP-223ENST00000629179 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
PNKP-223ENST00000629179 ATOX1O00244 68 aa6.93□□□□□ -1.3
PNKP-223ENST00000629179 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
PNKP-223ENST00000629179 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
PNKP-223ENST00000629179 CXCL6P80162 114 aa6.92□□□□□ -1.3
PNKP-223ENST00000629179 FAM236AA0A1B0GUQ0 79 aa6.91□□□□□ -1.3
PNKP-223ENST00000629179 FAM236BA0A1B0GV22 79 aa6.91□□□□□ -1.3
PNKP-223ENST00000629179 MT1FP04733 61 aa6.91□□□□□ -1.3
PNKP-223ENST00000629179 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
PNKP-223ENST00000629179 KRTAP10-10P60014 251 aa6.88□□□□□ -1.31
PNKP-223ENST00000629179 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
PNKP-223ENST00000629179 SMIM20Q8N5G0 67 aa6.88□□□□□ -1.31
PNKP-223ENST00000629179 UQCRQO14949 82 aa6.86□□□□□ -1.31
PNKP-223ENST00000629179 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
PNKP-223ENST00000629179 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
PNKP-223ENST00000629179 COX7CP15954 63 aa6.82□□□□□ -1.32
PNKP-223ENST00000629179 SERP2Q8N6R1 65 aa6.81□□□□□ -1.32
PNKP-223ENST00000629179 C4orf26Q17RF5 130 aa6.8□□□□□ -1.32
PNKP-223ENST00000629179 LCE2BO14633 110 aa6.79□□□□□ -1.32
PNKP-223ENST00000629179 A0A087WVE0 104 aa6.76□□□□□ -1.33
PNKP-223ENST00000629179 CCDC179H3BU77 68 aa6.76□□□□□ -1.33
PNKP-223ENST00000629179 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
PNKP-223ENST00000629179 TRAV7A0A075B6U4 112 aa6.74□□□□□ -1.33
PNKP-223ENST00000629179 USH2AO75445 5202 aa6.73□□□□□ -1.33
PNKP-223ENST00000629179 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
PNKP-223ENST00000629179 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
PNKP-223ENST00000629179 NDUFC1O43677 76 aa6.66□□□□□ -1.34
PNKP-223ENST00000629179 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
PNKP-223ENST00000629179 TMEM258P61165 79 aa6.65□□□□□ -1.34
PNKP-223ENST00000629179 C5orf47Q569G3 176 aa6.64□□□□□ -1.35
PNKP-223ENST00000629179 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms