RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 TGP01266 2768 aa15.82■□□□□ 0.12
NRXN1-228ENST00000628364 SPINK6Q6UWN8 80 aa15.82■□□□□ 0.12
NRXN1-228ENST00000628364 NOTCH2NLQ7Z3S9 236 aa15.82■□□□□ 0.12
NRXN1-228ENST00000628364 DNAH6Q9C0G6 4158 aa15.82■□□□□ 0.12
NRXN1-228ENST00000628364 BRK1Q8WUW1 75 aa15.8■□□□□ 0.12
NRXN1-228ENST00000628364 Q6ZSA8 131 aa15.79■□□□□ 0.12
NRXN1-228ENST00000628364 PCOTHQ58A44 107 aa15.77■□□□□ 0.12
NRXN1-228ENST00000628364 C8orf87E5RJ46 101 aa15.75■□□□□ 0.11
NRXN1-228ENST00000628364 C1orf195Q5TG92 126 aa15.72■□□□□ 0.11
NRXN1-228ENST00000628364 DNHD1Q96M86 4753 aa15.71■□□□□ 0.11
NRXN1-228ENST00000628364 KRTAP10-1P60331 282 aa15.71■□□□□ 0.11
NRXN1-228ENST00000628364 COA5Q86WW8 74 aa15.69■□□□□ 0.1
NRXN1-228ENST00000628364 LOC101927531A0A1B0GV80 90 aa15.68■□□□□ 0.1
NRXN1-228ENST00000628364 PSPHP1O15172 72 aa15.67■□□□□ 0.1
NRXN1-228ENST00000628364 ALMS1Q8TCU4 4167 aa15.66■□□□□ 0.1
NRXN1-228ENST00000628364 DNAH5Q8TE73 4624 aa15.66■□□□□ 0.1
NRXN1-228ENST00000628364 LIMD2Q9BT23 127 aa15.65■□□□□ 0.1
NRXN1-228ENST00000628364 Q8N9P0 234 aaPredicted RBP15.65■□□□□ 0.1
NRXN1-228ENST00000628364 DNAH11Q96DT5 4516 aa15.65■□□□□ 0.1
NRXN1-228ENST00000628364 KRTAP13-2Q52LG2 175 aa15.64■□□□□ 0.09
NRXN1-228ENST00000628364 KRTAP13-3Q3SY46 172 aa15.6■□□□□ 0.09
NRXN1-228ENST00000628364 Q5W150 140 aa15.59■□□□□ 0.09
NRXN1-228ENST00000628364 A8MUN3 132 aa15.58■□□□□ 0.09
NRXN1-228ENST00000628364 LINC00313P59037 77 aa15.58■□□□□ 0.09
NRXN1-228ENST00000628364 KRTAP1-4P0C5Y4 121 aa15.51■□□□□ 0.07
NRXN1-228ENST00000628364 Q5VV11 94 aa15.51■□□□□ 0.07
NRXN1-228ENST00000628364 PKD1P98161 4303 aa15.48■□□□□ 0.07
NRXN1-228ENST00000628364 FAM229AH3BQW9 127 aa15.47■□□□□ 0.07
NRXN1-228ENST00000628364 HRES1P13985 223 aa15.46■□□□□ 0.07
NRXN1-228ENST00000628364 KRTAP21-3Q3LHN1 58 aa15.45■□□□□ 0.06
NRXN1-228ENST00000628364 PRR15LQ9BU68 103 aa15.45■□□□□ 0.06
NRXN1-228ENST00000628364 LRP1BQ9NZR2 4599 aa15.42■□□□□ 0.06
NRXN1-228ENST00000628364 FAT2Q9NYQ8 4349 aa15.41■□□□□ 0.06
NRXN1-228ENST00000628364 C4orf48Q5BLP8 95 aa15.4■□□□□ 0.06
NRXN1-228ENST00000628364 PLA2G1BP04054 148 aaKnown RBP15.39■□□□□ 0.05
NRXN1-228ENST00000628364 CHKB-CPT1BH3BT56 60 aa15.38■□□□□ 0.05
NRXN1-228ENST00000628364 LINC01558Q9Y6Z2 57 aa15.37■□□□□ 0.05
NRXN1-228ENST00000628364 Q75L30 129 aa15.36■□□□□ 0.05
NRXN1-228ENST00000628364 TYMSOSQ8TAI1 123 aa15.35■□□□□ 0.05
NRXN1-228ENST00000628364 KRTAP16-1A8MUX0 517 aa15.35■□□□□ 0.05
NRXN1-228ENST00000628364 SPINK1P00995 79 aa15.33■□□□□ 0.04
NRXN1-228ENST00000628364 ACYP2P14621 99 aa15.33■□□□□ 0.04
NRXN1-228ENST00000628364 SPAG11AQ6PDA7 123 aa15.33■□□□□ 0.04
NRXN1-228ENST00000628364 HYDINQ4G0P3 5121 aa15.31■□□□□ 0.04
NRXN1-228ENST00000628364 IGKV2-30P06310 120 aa15.29■□□□□ 0.04
NRXN1-228ENST00000628364 DMAC1Q96GE9 116 aa15.25■□□□□ 0.03
NRXN1-228ENST00000628364 RETNLBQ9BQ08 111 aa15.25■□□□□ 0.03
NRXN1-228ENST00000628364 VPS13BQ7Z7G8 4022 aa15.2■□□□□ 0.02
NRXN1-228ENST00000628364 RPS29P62273 56 aaKnown RBP15.19■□□□□ 0.02
NRXN1-228ENST00000628364 A6NED7 52 aa15.18■□□□□ 0.02
NRXN1-228ENST00000628364 PRR26Q8N8Z3 221 aa15.16■□□□□ 0.02
NRXN1-228ENST00000628364 LINC00304Q8N9R0 145 aa15.14■□□□□ 0.01
NRXN1-228ENST00000628364 A8MU10 97 aa15.08■□□□□ 0.01
NRXN1-228ENST00000628364 LCA10Q71F78 164 aa15.07■□□□□ 0
NRXN1-228ENST00000628364 IGKV2D-30A0A075B6S6 120 aa15.05■□□□□ 0
NRXN1-228ENST00000628364 CDC42SE1Q9NRR8 79 aa15.05■□□□□ -0
NRXN1-228ENST00000628364 ATP11AUNQ6ZP68 121 aa15.01□□□□□ -0.01
NRXN1-228ENST00000628364 SMR3BP02814 79 aaPredicted RBP14.98□□□□□ -0.01
NRXN1-228ENST00000628364 A0A1B0GVY2 172 aa14.97□□□□□ -0.01
NRXN1-228ENST00000628364 PMAIP1Q13794 54 aa14.96□□□□□ -0.01
NRXN1-228ENST00000628364 SACSQ9NZJ4 4579 aa14.93□□□□□ -0.02
NRXN1-228ENST00000628364 SPINK7P58062 85 aa14.93□□□□□ -0.02
NRXN1-228ENST00000628364 SPTSSBQ8NFR3 76 aa14.91□□□□□ -0.02
NRXN1-228ENST00000628364 C7orf65Q6ZTY9 151 aa14.9□□□□□ -0.02
NRXN1-228ENST00000628364 PKHD1P08F94 4074 aa14.9□□□□□ -0.02
NRXN1-228ENST00000628364 KRTAP10-4P60372 401 aaPredicted RBP14.86□□□□□ -0.03
NRXN1-228ENST00000628364 A0A1B0GU69 56 aa14.83□□□□□ -0.04
NRXN1-228ENST00000628364 DYNC1H1Q14204 4646 aaKnown RBP14.83□□□□□ -0.04
NRXN1-228ENST00000628364 C20orf166-AS1Q96NR2 134 aa14.76□□□□□ -0.05
NRXN1-228ENST00000628364 A8MUU9 505 aa14.76□□□□□ -0.05
NRXN1-228ENST00000628364 C9orf92A6NGG3 77 aa14.7□□□□□ -0.06
NRXN1-228ENST00000628364 A6NN06 94 aa14.7□□□□□ -0.06
NRXN1-228ENST00000628364 APOBP04114 4563 aaKnown RBP14.66□□□□□ -0.06
NRXN1-228ENST00000628364 PKHD1L1Q86WI1 4243 aa14.66□□□□□ -0.06
NRXN1-228ENST00000628364 Q8N1X5 172 aa14.64□□□□□ -0.07
NRXN1-228ENST00000628364 KTN1-AS1Q86SY8 53 aa14.63□□□□□ -0.07
NRXN1-228ENST00000628364 FAT1Q14517 4588 aa14.58□□□□□ -0.08
NRXN1-228ENST00000628364 SPATA8Q6RVD6 105 aa14.57□□□□□ -0.08
NRXN1-228ENST00000628364 UQCR11O14957 56 aa14.57□□□□□ -0.08
NRXN1-228ENST00000628364 MIR22HGQ0VDD5 57 aa14.49□□□□□ -0.09
NRXN1-228ENST00000628364 SEC61GP60059 68 aa14.46□□□□□ -0.09
NRXN1-228ENST00000628364 RYR2Q92736 4967 aa14.46□□□□□ -0.09
NRXN1-228ENST00000628364 KRTAP3-1Q9BYR8 98 aa14.38□□□□□ -0.11
NRXN1-228ENST00000628364 KRTAP10-8P60410 259 aa14.35□□□□□ -0.11
NRXN1-228ENST00000628364 FLG2Q5D862 2391 aaPredicted RBP14.32□□□□□ -0.12
NRXN1-228ENST00000628364 Q5VSD8 79 aa14.27□□□□□ -0.12
NRXN1-228ENST00000628364 COX6B2Q6YFQ2 88 aa14.26□□□□□ -0.13
NRXN1-228ENST00000628364 KMT2CQ8NEZ4 4911 aaKnown RBP14.2□□□□□ -0.14
NRXN1-228ENST00000628364 FAT3Q8TDW7 4589 aa14.15□□□□□ -0.14
NRXN1-228ENST00000628364 RBM12B-AS1Q9P1G2 102 aa14.14□□□□□ -0.15
NRXN1-228ENST00000628364 TNXBP22105 4242 aa14.13□□□□□ -0.15
NRXN1-228ENST00000628364 RPL37P61927 97 aaKnown RBP14.12□□□□□ -0.15
NRXN1-228ENST00000628364 A0A1B0GU33 70 aa14.06□□□□□ -0.16
NRXN1-228ENST00000628364 HSPG2P98160 4391 aa14.03□□□□□ -0.16
NRXN1-228ENST00000628364 LRP1Q07954 4544 aaKnown RBP14.03□□□□□ -0.16
NRXN1-228ENST00000628364 H1FX-AS1Q4G0G2 97 aa14.02□□□□□ -0.17
NRXN1-228ENST00000628364 XP32Q5T750 250 aa14.02□□□□□ -0.17
NRXN1-228ENST00000628364 H0YAA0 97 aa14.01□□□□□ -0.17
NRXN1-228ENST00000628364 PRAC1Q96KF2 57 aa13.9□□□□□ -0.18
NRXN1-228ENST00000628364 ADM2Q7Z4H4 148 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms