RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
PCDHB4-202ENST00000623478 LINC00313P59037 77 aa10.8□□□□□ -0.68
PCDHB4-202ENST00000623478 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
PCDHB4-202ENST00000623478 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
PCDHB4-202ENST00000623478 DSCR8Q96T75 97 aa10.78□□□□□ -0.68
PCDHB4-202ENST00000623478 IGHV6-1A0A0B4J1U7 121 aa10.75□□□□□ -0.69
PCDHB4-202ENST00000623478 LYRM7Q5U5X0 104 aa10.75□□□□□ -0.69
PCDHB4-202ENST00000623478 TRBV20-1A0A075B6N2 111 aa10.74□□□□□ -0.69
PCDHB4-202ENST00000623478 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
PCDHB4-202ENST00000623478 SMCPP49901 116 aaPredicted RBP10.73□□□□□ -0.69
PCDHB4-202ENST00000623478 C9JAW5 83 aa10.71□□□□□ -0.69
PCDHB4-202ENST00000623478 SPCS1Q9Y6A9 102 aa10.68□□□□□ -0.7
PCDHB4-202ENST00000623478 A0A1B0GVX0 72 aa10.67□□□□□ -0.7
PCDHB4-202ENST00000623478 K7EP34 96 aa10.65□□□□□ -0.7
PCDHB4-202ENST00000623478 Q6ZQT0 140 aa10.65□□□□□ -0.7
PCDHB4-202ENST00000623478 C8orf87E5RJ46 101 aa10.63□□□□□ -0.71
PCDHB4-202ENST00000623478 JMJD7-PLA2G4BH0Y9G9 81 aa10.62□□□□□ -0.71
PCDHB4-202ENST00000623478 C21orf62-AS1Q17RA5 79 aa10.61□□□□□ -0.71
PCDHB4-202ENST00000623478 CRCT1Q9UGL9 99 aa10.61□□□□□ -0.71
PCDHB4-202ENST00000623478 LOC110117498A0A087WWA1 95 aa10.6□□□□□ -0.71
PCDHB4-202ENST00000623478 J3KT08 172 aa10.6□□□□□ -0.71
PCDHB4-202ENST00000623478 PRO0461Q9UI25 63 aa10.59□□□□□ -0.71
PCDHB4-202ENST00000623478 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
PCDHB4-202ENST00000623478 H3BT86 120 aa10.56□□□□□ -0.72
PCDHB4-202ENST00000623478 MTURNQ8N3F0 131 aa10.55□□□□□ -0.72
PCDHB4-202ENST00000623478 HRES1P13985 223 aa10.54□□□□□ -0.72
PCDHB4-202ENST00000623478 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
PCDHB4-202ENST00000623478 A0A1B0GV90 55 aa10.53□□□□□ -0.72
PCDHB4-202ENST00000623478 PDE6GP18545 87 aa10.53□□□□□ -0.72
PCDHB4-202ENST00000623478 FAM236DA0A1B0GTK5 79 aa10.52□□□□□ -0.73
PCDHB4-202ENST00000623478 A0A1B0GW54 56 aa10.52□□□□□ -0.73
PCDHB4-202ENST00000623478 FAM236CP0DP71 79 aa10.52□□□□□ -0.73
PCDHB4-202ENST00000623478 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.73
PCDHB4-202ENST00000623478 NDUFB1O75438 58 aa10.51□□□□□ -0.73
PCDHB4-202ENST00000623478 A8MWP4 228 aa10.5□□□□□ -0.73
PCDHB4-202ENST00000623478 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
PCDHB4-202ENST00000623478 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
PCDHB4-202ENST00000623478 C8orf17Q9NRJ1 99 aa10.47□□□□□ -0.73
PCDHB4-202ENST00000623478 RBM12B-AS1Q9P1G2 102 aa10.47□□□□□ -0.73
PCDHB4-202ENST00000623478 Q8N9P0 234 aaPredicted RBP10.46□□□□□ -0.73
PCDHB4-202ENST00000623478 KRTAP9-8Q9BYQ0 159 aa10.46□□□□□ -0.73
PCDHB4-202ENST00000623478 F8W1H4 67 aa10.44□□□□□ -0.74
PCDHB4-202ENST00000623478 NREPQ16612 68 aa10.42□□□□□ -0.74
PCDHB4-202ENST00000623478 SPINK7P58062 85 aa10.41□□□□□ -0.74
PCDHB4-202ENST00000623478 PRR15Q8IV56 129 aa10.4□□□□□ -0.74
PCDHB4-202ENST00000623478 Q6ZVQ6 151 aa10.38□□□□□ -0.75
PCDHB4-202ENST00000623478 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
PCDHB4-202ENST00000623478 ETDBQ3ZM63 59 aa10.33□□□□□ -0.76
PCDHB4-202ENST00000623478 K7EQZ3 153 aa10.32□□□□□ -0.76
PCDHB4-202ENST00000623478 MT2AP02795 61 aa10.32□□□□□ -0.76
PCDHB4-202ENST00000623478 USH2AO75445 5202 aa10.32□□□□□ -0.76
PCDHB4-202ENST00000623478 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
PCDHB4-202ENST00000623478 MRPL34Q9BQ48 92 aaKnown RBP10.29□□□□□ -0.76
PCDHB4-202ENST00000623478 WFDC13Q8IUB5 93 aa10.28□□□□□ -0.76
PCDHB4-202ENST00000623478 hDV103S1A0JD37 113 aa10.25□□□□□ -0.77
PCDHB4-202ENST00000623478 BPY2O14599 106 aa10.25□□□□□ -0.77
PCDHB4-202ENST00000623478 MT1FP04733 61 aa10.25□□□□□ -0.77
PCDHB4-202ENST00000623478 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
PCDHB4-202ENST00000623478 NDUFS5O43920 106 aa10.22□□□□□ -0.77
PCDHB4-202ENST00000623478 Q8N9L7 120 aa10.2□□□□□ -0.78
PCDHB4-202ENST00000623478 KRTAP10-10P60014 251 aa10.17□□□□□ -0.78
PCDHB4-202ENST00000623478 KRTAP9-3Q9BYQ3 159 aa10.13□□□□□ -0.79
PCDHB4-202ENST00000623478 LINC00846Q9NV44 126 aa10.12□□□□□ -0.79
PCDHB4-202ENST00000623478 Q5W150 140 aa10.11□□□□□ -0.79
PCDHB4-202ENST00000623478 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
PCDHB4-202ENST00000623478 IGKV2D-30A0A075B6S6 120 aa10.08□□□□□ -0.8
PCDHB4-202ENST00000623478 IGKV2-30P06310 120 aa10.08□□□□□ -0.8
PCDHB4-202ENST00000623478 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
PCDHB4-202ENST00000623478 HCG22E2RYF7 251 aa10.06□□□□□ -0.8
PCDHB4-202ENST00000623478 C7orf65Q6ZTY9 151 aa10.04□□□□□ -0.8
PCDHB4-202ENST00000623478 UBL5Q9BZL1 73 aa10.04□□□□□ -0.8
PCDHB4-202ENST00000623478 ACYP1P07311 99 aa10.03□□□□□ -0.8
PCDHB4-202ENST00000623478 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
PCDHB4-202ENST00000623478 CXCL6P80162 114 aa9.97□□□□□ -0.81
PCDHB4-202ENST00000623478 FCGBPQ9Y6R7 5405 aaPredicted RBP9.95□□□□□ -0.82
PCDHB4-202ENST00000623478 J3QR89 54 aa9.92□□□□□ -0.82
PCDHB4-202ENST00000623478 C4orf26Q17RF5 130 aa9.92□□□□□ -0.82
PCDHB4-202ENST00000623478 KRTAP19-1Q8IUB9 90 aa9.92□□□□□ -0.82
PCDHB4-202ENST00000623478 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.9□□□□□ -0.82
PCDHB4-202ENST00000623478 K7ERU9 68 aa9.84□□□□□ -0.83
PCDHB4-202ENST00000623478 LINC00643Q86TS7 51 aa9.84□□□□□ -0.83
PCDHB4-202ENST00000623478 ATP5EP2Q5VTU8 51 aa9.8□□□□□ -0.84
PCDHB4-202ENST00000623478 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.85
PCDHB4-202ENST00000623478 TP53AIP1Q9HCN2 124 aa9.76□□□□□ -0.85
PCDHB4-202ENST00000623478 KRTAP9-7A8MTY7 169 aa9.75□□□□□ -0.85
PCDHB4-202ENST00000623478 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
PCDHB4-202ENST00000623478 MACF1Q9UPN3 7388 aaKnown RBP9.71□□□□□ -0.85
PCDHB4-202ENST00000623478 KRTAP19-6Q3LI70 58 aa9.71□□□□□ -0.86
PCDHB4-202ENST00000623478 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.86
PCDHB4-202ENST00000623478 S4R3F8 94 aa9.68□□□□□ -0.86
PCDHB4-202ENST00000623478 MT-ATP8P03928 68 aa9.64□□□□□ -0.87
PCDHB4-202ENST00000623478 LCA10Q71F78 164 aa9.64□□□□□ -0.87
PCDHB4-202ENST00000623478 A0A087WVE0 104 aa9.63□□□□□ -0.87
PCDHB4-202ENST00000623478 LOC100996750A0A140TA64 210 aa9.62□□□□□ -0.87
PCDHB4-202ENST00000623478 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
PCDHB4-202ENST00000623478 KRTAP4-6Q9BYQ5 205 aa9.62□□□□□ -0.87
PCDHB4-202ENST00000623478 CYP4F30PQ9H0H9 118 aa9.61□□□□□ -0.87
PCDHB4-202ENST00000623478 TRAV22A0A0B4J277 110 aa9.58□□□□□ -0.88
PCDHB4-202ENST00000623478 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
PCDHB4-202ENST00000623478 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms