RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
CBWD3-219ENST00000622817 HIST1H4AP62805 103 aaKnown RBP4.07□□□□□ -1.76
CBWD3-219ENST00000622817 LINC00472Q9H8W2 130 aa4.07□□□□□ -1.76
CBWD3-219ENST00000622817 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
CBWD3-219ENST00000622817 FAT1Q14517 4588 aa4.06□□□□□ -1.76
CBWD3-219ENST00000622817 J3KT08 172 aa4.06□□□□□ -1.76
CBWD3-219ENST00000622817 HSPG2P98160 4391 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 SPINK1P00995 79 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 Q5XG85 94 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 SPAG11AQ6PDA7 123 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 LINC00304Q8N9R0 145 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 PCP4P48539 62 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 DSCR10P59022 87 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 ASB16-AS1Q495Z4 193 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
CBWD3-219ENST00000622817 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
CBWD3-219ENST00000622817 Q96NJ1 140 aa4.04□□□□□ -1.76
CBWD3-219ENST00000622817 A0A087WVE0 104 aa4.03□□□□□ -1.76
CBWD3-219ENST00000622817 IGKV4-1P06312 121 aa4.03□□□□□ -1.76
CBWD3-219ENST00000622817 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
CBWD3-219ENST00000622817 Q8N9L7 120 aa4.03□□□□□ -1.76
CBWD3-219ENST00000622817 A8MWP4 228 aa4.03□□□□□ -1.77
CBWD3-219ENST00000622817 FAM236AA0A1B0GUQ0 79 aa4.02□□□□□ -1.77
CBWD3-219ENST00000622817 FAM236BA0A1B0GV22 79 aa4.02□□□□□ -1.77
CBWD3-219ENST00000622817 K7EQZ3 153 aa4.02□□□□□ -1.77
CBWD3-219ENST00000622817 NDUFB1O75438 58 aa4.02□□□□□ -1.77
CBWD3-219ENST00000622817 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
CBWD3-219ENST00000622817 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
CBWD3-219ENST00000622817 C1orf195Q5TG92 126 aa4.01□□□□□ -1.77
CBWD3-219ENST00000622817 FLG2Q5D862 2391 aaPredicted RBP4□□□□□ -1.77
CBWD3-219ENST00000622817 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
CBWD3-219ENST00000622817 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
CBWD3-219ENST00000622817 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
CBWD3-219ENST00000622817 ATOX1O00244 68 aa3.98□□□□□ -1.77
CBWD3-219ENST00000622817 OXTP01178 125 aa3.98□□□□□ -1.77
CBWD3-219ENST00000622817 IGHV6-1A0A0B4J1U7 121 aa3.97□□□□□ -1.77
CBWD3-219ENST00000622817 ANAPC13Q9BS18 74 aa3.96□□□□□ -1.77
CBWD3-219ENST00000622817 CASC2Q6XLA1 102 aa3.96□□□□□ -1.78
CBWD3-219ENST00000622817 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.78
CBWD3-219ENST00000622817 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
CBWD3-219ENST00000622817 MMP24-AS1A0A0U1RRL7 71 aa3.95□□□□□ -1.78
CBWD3-219ENST00000622817 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
CBWD3-219ENST00000622817 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
CBWD3-219ENST00000622817 WFDC13Q8IUB5 93 aa3.95□□□□□ -1.78
CBWD3-219ENST00000622817 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
CBWD3-219ENST00000622817 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
CBWD3-219ENST00000622817 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
CBWD3-219ENST00000622817 LINC00313P59037 77 aa3.93□□□□□ -1.78
CBWD3-219ENST00000622817 SERP2Q8N6R1 65 aa3.93□□□□□ -1.78
CBWD3-219ENST00000622817 TRAV7A0A075B6U4 112 aa3.92□□□□□ -1.78
CBWD3-219ENST00000622817 TMEM254Q8TBM7 123 aa3.92□□□□□ -1.78
CBWD3-219ENST00000622817 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
CBWD3-219ENST00000622817 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
CBWD3-219ENST00000622817 HERC2O95714 4834 aa3.91□□□□□ -1.78
CBWD3-219ENST00000622817 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
CBWD3-219ENST00000622817 TNXBP22105 4242 aa3.91□□□□□ -1.78
CBWD3-219ENST00000622817 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
CBWD3-219ENST00000622817 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
CBWD3-219ENST00000622817 COX7CP15954 63 aa3.9□□□□□ -1.78
CBWD3-219ENST00000622817 RETNLBQ9BQ08 111 aa3.9□□□□□ -1.78
CBWD3-219ENST00000622817 FP248Q71RG6 208 aaPredicted RBP3.9□□□□□ -1.79
CBWD3-219ENST00000622817 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
CBWD3-219ENST00000622817 UQCRQO14949 82 aa3.89□□□□□ -1.79
CBWD3-219ENST00000622817 TP53AIP1Q9HCN2 124 aa3.89□□□□□ -1.79
CBWD3-219ENST00000622817 NDUFS5O43920 106 aa3.88□□□□□ -1.79
CBWD3-219ENST00000622817 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
CBWD3-219ENST00000622817 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
CBWD3-219ENST00000622817 KRTAP16-1A8MUX0 517 aa3.87□□□□□ -1.79
CBWD3-219ENST00000622817 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
CBWD3-219ENST00000622817 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
CBWD3-219ENST00000622817 Q8N9P0 234 aaPredicted RBP3.86□□□□□ -1.79
CBWD3-219ENST00000622817 IGLV7-46A0A075B6I9 117 aa3.86□□□□□ -1.79
CBWD3-219ENST00000622817 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
CBWD3-219ENST00000622817 MP68P56378 58 aa3.84□□□□□ -1.79
CBWD3-219ENST00000622817 C20orf197Q8N268 126 aa3.84□□□□□ -1.79
CBWD3-219ENST00000622817 TRAV22A0A0B4J277 110 aa3.84□□□□□ -1.8
CBWD3-219ENST00000622817 PRR4Q16378 134 aa3.84□□□□□ -1.8
CBWD3-219ENST00000622817 H0Y9P7 68 aa3.83□□□□□ -1.8
CBWD3-219ENST00000622817 H3BPC8 53 aa3.83□□□□□ -1.8
CBWD3-219ENST00000622817 A0A0U1RQV1 116 aa3.82□□□□□ -1.8
CBWD3-219ENST00000622817 KLKP1Q107X0 134 aa3.82□□□□□ -1.8
CBWD3-219ENST00000622817 A8MUU9 505 aa3.81□□□□□ -1.8
CBWD3-219ENST00000622817 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
CBWD3-219ENST00000622817 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
CBWD3-219ENST00000622817 SNURFQ9Y675 71 aa3.81□□□□□ -1.8
CBWD3-219ENST00000622817 Q5W150 140 aa3.8□□□□□ -1.8
CBWD3-219ENST00000622817 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
CBWD3-219ENST00000622817 Q75L30 129 aa3.79□□□□□ -1.8
CBWD3-219ENST00000622817 C1orf64Q8NEQ6 169 aa3.79□□□□□ -1.8
CBWD3-219ENST00000622817 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
CBWD3-219ENST00000622817 NDUFC1O43677 76 aa3.79□□□□□ -1.8
CBWD3-219ENST00000622817 TPRXLQ17RH7 258 aa3.79□□□□□ -1.8
CBWD3-219ENST00000622817 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
CBWD3-219ENST00000622817 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
CBWD3-219ENST00000622817 H7BZZ5 65 aa3.76□□□□□ -1.81
CBWD3-219ENST00000622817 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
CBWD3-219ENST00000622817 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CBWD3-219ENST00000622817 ATP11AUNQ6ZP68 121 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms