RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
LINC00963-214ENST00000622680 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
LINC00963-214ENST00000622680 DSCR10P59022 87 aa5.49□□□□□ -1.53
LINC00963-214ENST00000622680 SS18L2Q9UHA2 77 aa5.49□□□□□ -1.53
LINC00963-214ENST00000622680 A0A1B0GV90 55 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 C9JAW5 83 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 MTURNQ8N3F0 131 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 KRTAP3-3Q9BYR6 98 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
LINC00963-214ENST00000622680 K7EP34 96 aa5.47□□□□□ -1.53
LINC00963-214ENST00000622680 UBE2V1Q13404 147 aa5.47□□□□□ -1.53
LINC00963-214ENST00000622680 DSCR8Q96T75 97 aa5.47□□□□□ -1.53
LINC00963-214ENST00000622680 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
LINC00963-214ENST00000622680 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.53
LINC00963-214ENST00000622680 A0A087WSZ3 146 aa5.46□□□□□ -1.54
LINC00963-214ENST00000622680 KRTAP10-10P60014 251 aa5.46□□□□□ -1.54
LINC00963-214ENST00000622680 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
LINC00963-214ENST00000622680 TEN1Q86WV5 123 aa5.46□□□□□ -1.54
LINC00963-214ENST00000622680 SIGMAR1Q99720 223 aa5.45□□□□□ -1.54
LINC00963-214ENST00000622680 CCKP06307 115 aa5.44□□□□□ -1.54
LINC00963-214ENST00000622680 GTF2H5Q6ZYL4 71 aa5.44□□□□□ -1.54
LINC00963-214ENST00000622680 SYNE2Q8WXH0 6885 aaKnown RBP5.43□□□□□ -1.54
LINC00963-214ENST00000622680 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
LINC00963-214ENST00000622680 HRES1P13985 223 aa5.43□□□□□ -1.54
LINC00963-214ENST00000622680 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
LINC00963-214ENST00000622680 TRBV7-4A0A0J9YYF1 115 aa5.4□□□□□ -1.54
LINC00963-214ENST00000622680 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
LINC00963-214ENST00000622680 SMCPP49901 116 aaPredicted RBP5.4□□□□□ -1.54
LINC00963-214ENST00000622680 C14orf132Q9NPU4 83 aa5.4□□□□□ -1.54
LINC00963-214ENST00000622680 RBM12B-AS1Q9P1G2 102 aa5.4□□□□□ -1.54
LINC00963-214ENST00000622680 NOTCH2NLQ7Z3S9 236 aa5.39□□□□□ -1.55
LINC00963-214ENST00000622680 PRO0461Q9UI25 63 aa5.39□□□□□ -1.55
LINC00963-214ENST00000622680 H3BT86 120 aa5.38□□□□□ -1.55
LINC00963-214ENST00000622680 LINC00313P59037 77 aa5.38□□□□□ -1.55
LINC00963-214ENST00000622680 DEFB116Q30KQ4 102 aa5.38□□□□□ -1.55
LINC00963-214ENST00000622680 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
LINC00963-214ENST00000622680 F8W1H4 67 aa5.36□□□□□ -1.55
LINC00963-214ENST00000622680 PDE6GP18545 87 aa5.35□□□□□ -1.55
LINC00963-214ENST00000622680 KRTAP19-6Q3LI70 58 aa5.34□□□□□ -1.55
LINC00963-214ENST00000622680 Q6ZQT0 140 aa5.34□□□□□ -1.55
LINC00963-214ENST00000622680 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
LINC00963-214ENST00000622680 ETDBQ3ZM63 59 aa5.33□□□□□ -1.56
LINC00963-214ENST00000622680 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
LINC00963-214ENST00000622680 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
LINC00963-214ENST00000622680 PCP4P48539 62 aa5.31□□□□□ -1.56
LINC00963-214ENST00000622680 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
LINC00963-214ENST00000622680 NREPQ16612 68 aa5.3□□□□□ -1.56
LINC00963-214ENST00000622680 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
LINC00963-214ENST00000622680 LINC00846Q9NV44 126 aa5.29□□□□□ -1.56
LINC00963-214ENST00000622680 J3KT08 172 aa5.27□□□□□ -1.57
LINC00963-214ENST00000622680 NDUFB1O75438 58 aa5.27□□□□□ -1.57
LINC00963-214ENST00000622680 Q8N9P0 234 aaPredicted RBP5.26□□□□□ -1.57
LINC00963-214ENST00000622680 A0A1B0GW54 56 aa5.25□□□□□ -1.57
LINC00963-214ENST00000622680 ZCCHC13Q8WW36 166 aaKnown RBP5.25□□□□□ -1.57
LINC00963-214ENST00000622680 A0A1B0GVX0 72 aa5.24□□□□□ -1.57
LINC00963-214ENST00000622680 SPINK7P58062 85 aa5.24□□□□□ -1.57
LINC00963-214ENST00000622680 A8MWP4 228 aa5.23□□□□□ -1.57
LINC00963-214ENST00000622680 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
LINC00963-214ENST00000622680 C8orf87E5RJ46 101 aa5.22□□□□□ -1.57
LINC00963-214ENST00000622680 WFDC13Q8IUB5 93 aa5.22□□□□□ -1.57
LINC00963-214ENST00000622680 BPY2O14599 106 aa5.21□□□□□ -1.58
LINC00963-214ENST00000622680 UBL5Q9BZL1 73 aa5.2□□□□□ -1.58
LINC00963-214ENST00000622680 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
LINC00963-214ENST00000622680 Q6ZVQ6 151 aa5.19□□□□□ -1.58
LINC00963-214ENST00000622680 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
LINC00963-214ENST00000622680 MUC12Q9UKN1 5478 aa5.17□□□□□ -1.58
LINC00963-214ENST00000622680 NDUFS5O43920 106 aa5.16□□□□□ -1.58
LINC00963-214ENST00000622680 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
LINC00963-214ENST00000622680 Q8N9L7 120 aa5.16□□□□□ -1.58
LINC00963-214ENST00000622680 K7EQZ3 153 aa5.15□□□□□ -1.59
LINC00963-214ENST00000622680 J3QR89 54 aa5.14□□□□□ -1.59
LINC00963-214ENST00000622680 NEBP20929 6669 aa5.14□□□□□ -1.59
LINC00963-214ENST00000622680 ACYP1P07311 99 aa5.13□□□□□ -1.59
LINC00963-214ENST00000622680 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
LINC00963-214ENST00000622680 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
LINC00963-214ENST00000622680 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
LINC00963-214ENST00000622680 K7ERU9 68 aa5.1□□□□□ -1.59
LINC00963-214ENST00000622680 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
LINC00963-214ENST00000622680 CASC2Q6XLA1 102 aa5.09□□□□□ -1.59
LINC00963-214ENST00000622680 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
LINC00963-214ENST00000622680 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
LINC00963-214ENST00000622680 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
LINC00963-214ENST00000622680 CXCL6P80162 114 aa5.04□□□□□ -1.6
LINC00963-214ENST00000622680 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
LINC00963-214ENST00000622680 HIST1H4AP62805 103 aaKnown RBP5.03□□□□□ -1.6
LINC00963-214ENST00000622680 IGKV2D-30A0A075B6S6 120 aa5.01□□□□□ -1.61
LINC00963-214ENST00000622680 A6NN06 94 aa5.01□□□□□ -1.61
LINC00963-214ENST00000622680 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
LINC00963-214ENST00000622680 SCGB1A1P11684 91 aa5.01□□□□□ -1.61
LINC00963-214ENST00000622680 MT1BP07438 61 aa5□□□□□ -1.61
LINC00963-214ENST00000622680 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
LINC00963-214ENST00000622680 MT-ATP8P03928 68 aa4.99□□□□□ -1.61
LINC00963-214ENST00000622680 ATP5EP2Q5VTU8 51 aa4.99□□□□□ -1.61
LINC00963-214ENST00000622680 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
LINC00963-214ENST00000622680 A0A087WVE0 104 aa4.97□□□□□ -1.61
LINC00963-214ENST00000622680 KMT2DO14686 5537 aa4.96□□□□□ -1.61
LINC00963-214ENST00000622680 FAM236AA0A1B0GUQ0 79 aa4.96□□□□□ -1.62
LINC00963-214ENST00000622680 FAM236BA0A1B0GV22 79 aa4.96□□□□□ -1.62
LINC00963-214ENST00000622680 Q5W150 140 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms